Microtus oregoni (creeping vole): 121453172
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Entry
121453172 CDS
T08307
Symbol
Pcdh1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121453172 (Pcdh1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
morg01009
]
121453172 (Pcdh1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
morg04515
]
121453172 (Pcdh1)
Protein phosphatases and associated proteins [BR:
morg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121453172 (Pcdh1)
Cell adhesion molecules [BR:
morg04515
]
Cadherins
Protocadherins
121453172 (Pcdh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
121453172
NCBI-ProteinID:
XP_041515631
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MPPPWGCVTLGPKAKVLLILEPAGMGPLRPSSGPRGQRLLLPPLLLALLLLLAPSAGHTT
QVVYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDRE
GLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIP
ENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNL
DRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHS
VIQVKANDSDQGANAEIDYTFHQAPEVVKRLLRLDRNTGLITVQGPVDREDLSTLRFSVL
ARDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQ
VSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVA
VDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSN
AELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATV
LVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDF
VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAP
SNTSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEK
EIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLVHSLDTPLDIDI
AGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYA
PKPSGKAAKGSKNKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNY
PPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYS
DYSYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPR
LGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQ
SSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSS
HDSCKDSATLEEIPLTQTSDFPPTATPASAQTAAKREIYL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccctggggttgtgtgaccctaggtcctaaggcaaaagttctcctgatcctg
gagcctgctgggatggggcctctgaggcccagctctgggccccgggggcagcggttgctg
ctgccccccttattgctggcactgctactcctattggctccatctgcaggccataccacc
caggtagtatacaaggtgccagaagaacagccgcccaacactctcatcgggagccttgcc
gctgactacggttttccagacgtgggtcatctgtacaaactagaggtaggtgctccatac
cttcgagtggacggcaagactggcgacattttcaccacagagacctccattgaccgagag
ggactccgtgaatgccagaaccagatccctgggaacccctgtatcctggagtttgaggtg
tctatcacggacctcgtgcagaatggcagcccccggctgctagagggacagatagaggtg
caggacatcaatgacaacacacccaactttgcctcgccagtcatcaccctggccatccct
gagaacaccaacatcggctcgctcttccccatcccactggccacagaccgtgatgctggc
cccaatggcgtagcatcctacgagctgcaggctgggcctgaggcccaggagctatttgga
ctgcaggtggctgaggaccaggaagagaagcagccacagctcattgtcatgggcaaccta
gaccgtgaacgctgggactcctatgacctcaccatcaaggtacaggatggagggaatcct
ccacgagccagcagtgccctgctgcgtgtcactgtgcttgatacaaatgacaacgctccc
aagttcgagcggccatcctacgaagccgagttgtctgagaatagccccattggccactcc
gtcatccaggtgaaagccaatgactcggaccaaggtgccaatgcagagattgactatacc
ttccaccaggcgcctgaagttgtcaagcgtcttttgcgactagacagaaacactggactt
atcaccgttcagggtcctgtggaccgtgaggatctaagcactctgcgcttctcagtgctc
gccagggaccgaggcgccaccccgaagagcgcccgtgcccaggtagtcgttactgtgaaa
gacatgaacgacaatgcccccaccattgagatccgaggcatagggctggtgactcaccaa
gatgggatggctaacatctcagaggatgtggcggaggagactgcagtggccttggtgcag
gtatctgatcgagatgaaggagagaatgcagcggtcacctgtgtcgtagcaggggatgtg
cccttccagctgcgccaggccagtgagacaggcagtgacagcaagaaaaagtactttctg
cagaccaccacccctcttgactatgagaaagtcaaagactataccattgagattgtggcc
gtggactccggcaaccccccactctctagcaccaactccctcaaggtccaggtggtagac
gtcaatgacaatgcccctgtcttcacccagagcatcactgaagtcgccttcccagaaaac
aacaagcctggggaagtggtggccgaggtcactgccagtgacgctgactccggctctaat
gcagagctggtgtattctctggaacccgagccagctgcccagggcctcttcactatctca
cctgagaacggagagatccgggtgaagacgtcgctggatcgggaacagagagacagctat
gagctgaaggtggtggcggctgaccggggcagtcccagccttcagggtacagccacggtc
cttgtcaacgtgctggactgcaacgacaatgaccccaagtttatgctgagtggctacaac
ttctctgtgatggagaacatgcccgcactgagtccagtgggcatggtgactgtcattgat
ggagacaagggggagaatgccagggtacagctctcggtagagcaggacaatggtgacttt
gttatccagaatggcacaggcaccatcttatccagcttgagcttcgacagggagcaacag
agtacctataccttccagctgaaggcggtagatggtggtgtcccacctcgctctgcctac
gtcggcgtcaccatcaatgtgttggatgagaacgacaatgcaccctttatcaccgccccc
tccaacacgtctcaccgactgctgaccccgcagacgcggcttggtgagacagtcagtcag
gtgacggcggaggacattgactccggtgtcaatgctgagctgacctatagcatcgctggt
ggcaacccttacggactcttccagattggatcacattcaggtgccatcaccctggagaag
gagattgaacggcgccaccacgggttacaccgccttgtggtgaaggtcagtgaccggggc
aagcccccacgctatggcacagccttggtccacctttacgtcaatgagaccttagccaac
cgcacattgctagagaccctcctcgtccatagcctggacacaccactggacatcgacatc
gctggggacccagagtacgagcgttccaagcagcgtggcaacattctctttggtgtcgtg
gccggagtcgtagccgtggccctactcatcgccctggcagtgcttgtgcgctactgccgg
cagcgggaggccaagagtggctatcaggctggcaagaaggagaccaaggacctgtatgct
cccaagcccagtggcaaagcggccaagggaagcaagaacaaagggaagaagagcaagtcc
ccgaagcccgtgaagccagtggaggacgaggatgaggccgggttgcaaaagtccctcaag
ttcaacctaatgagcgacgcccctggggacagtccccgaatccacctgcccctcaactac
ccaccaggcagccccgacttaggccgccattaccgctccaactccccactgccttccatc
cagctacaaccccagtcaccctcggcctccaagaagcaccaggtggtgcaggacctaccg
cctgcaaacacttttgtgggcaccggggacaccacgtccacgggctccgagcagtactcc
gactacagctatcgcaccaacccccccaaataccccagcaagcagttacctcaccgccgt
gtcaccttctcggccaccagtcaggcccaggagctgcaggacccatcacagcacagttat
tatgacagtggcctggaagagtctgaaacgccatctagcaagtcatcctcagggccccga
cttggtcccctggccctacctgaggaccactatgagcgcaccacccctgacggcagcata
ggtgaaatggagcaccccgagaacgacctccgccctttgcccgacgtcgccatgacgggc
acttgtacccgggagtgcagcgagtttggtcactctgacacatgctggatgcctggccag
tcgtctcccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttac
caggaccgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccgg
aacaccaaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagc
catgactcctgcaaggactcggccaccttggaggaaattcccctgacccagacctcggac
ttcccacccacagccacaccggcatctgcccagaccgccgccaagcgtgagatctacctg
tga
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