Microtus oregoni (creeping vole): 121453268
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Entry
121453268 CDS
T08307
Symbol
Npc1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03265
Virion - Ebolavirus and Lyssavirus
morg04142
Lysosome
morg04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
121453268 (Npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121453268 (Npc1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
121453268 (Npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
morg02000
]
121453268 (Npc1)
Transporters [BR:
morg02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
121453268 (Npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
121453268
NCBI-ProteinID:
XP_041515805
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MSTRLPALGLLLLLLCPAQVFSQSCVWYGECGKAFGDKRYNCKYFGPPKPLPKDGYDLVQ
ELCPGFYFDNVSLCCDVQQLRTLKSNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQF
LNVTATDDYIDPKTQENKTNVKELEYYVGQSFANAMYNACRDVEAPSSNQKALGLLCGRD
ASACNATNWIEYMFNKDNGQAPFTIIPIFSDLPILKMEPMRNATKGCNESVDEITGPCSC
QDCATVCGPKPQPPPPAIPWKILGLDAMYVIMWITYMAFLLVFFGGLLAVWCHRRRYFVS
EYTPIDSNIAFSVNTSDSGEASCCDPLGTAFDGCLRRMFTKWGTFCVRNPTCVIFFSLVF
IAACSSGLVFVRVTTNPVELWSAPHSRARMEKEYFDKHFGPFFRMEQLIIQAPNTSVHIY
EPYPSGSDVPFGPPLDKEILHQVLDLQIAIESITASYDNKTVTLQDICVAPLSPYNKNCT
IMSVLNYFQNSHSMLDHQVGDDFFVYADYHTHFLYCTRAPTSLNDTSMLHDPCLSTSGTP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFVNFVKNYKNPNLT
ISFIAERSIEDELNRESKSDVFTIAVSYAIMFLYISLALGHIQSCSRLLVDSKISLGIAG
ILIVLSSVACSLGIFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETL
DQQLGRILGEVAPTMFLSSFSETSAFFFGALSSVPAVHTFSLFAGLAVFIDFLLQITCFV
SLLGLDIKRQENNRLDILCCVRGAGDGRGAQASESFLFRFFKNSFAPLLLKDWLRPVVIA
VFVGVLSFSIAVVNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHDYT
TRKGQSMVCGGMGCDSDSLVQQIFNAAELDTYTRIGFAPSSWIDDYFDWVAPQSSCCRLY
NASHQFCNASVIDPTCVRCRPLTSEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYG
SAVNIIGDDTYVGATYFMTYHTVLKTSADYIDAMKKAQLVAKNITETMNSKGSNYRVFPY
SVFYVFYEQYLTIIDDTIFNLSVSLGSIFLVTLVILGCELWSAVIMCVTIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFEIFYFRMYLAMVLLGATHGLIFLPVLLSYVGPSVTKAKRQ
TTQDRYKGTERERLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcgcctcccggccctcggcctcctgctgctgctgctgtgccctgcgcaggtg
ttttcacaatcctgtgtttggtatggagaatgtgggaaagcatttggagataagaggtac
aactgcaaatattttggtccaccaaaacccttaccgaaggacgggtatgacctggtgcag
gagctctgtccaggattctatttcgacaatgtcagtctctgctgtgacgttcaacagctt
cggacactgaagagcaacctgcagctgccccttcagtttctgtccagatgtccgtcatgt
ttttataacctaatgaccctgttttgtgagctaacgtgtagccctcaccagagccagttt
ctgaacgtgacagccactgatgattacatcgatcctaagacccaggagaataaaacaaat
gtaaaggaattggagtactatgttggacagagctttgcgaatgcaatgtacaatgcctgc
cgtgatgtggaggccccatcaagtaaccagaaggccttagggctcctgtgtggaagggat
gccagtgcctgcaatgccaccaactggattgagtacatgttcaataaagacaatgggcag
gcgccattcaccatcatccccatcttttcagaccttcctatccttaagatggagcccatg
agaaatgctaccaaaggctgcaacgagtctgtagacgagatcacagggccgtgtagctgc
caggactgtgccactgtctgcggccccaagccgcagcctccaccgcctgccatcccctgg
aagatcttaggcttggatgccatgtatgtcatcatgtggatcacctacatggcatttctg
cttgtattttttggaggacttttggcagtgtggtgccacagaaggcggtattttgtgtct
gagtacactcccatcgacagcaatatagccttctctgtgaacaccagtgactccggggaa
gcctcgtgctgtgacccacttggcacagcatttgatggctgtctgaggcgcatgttcaca
aagtggggaactttctgtgtccgaaatcccacctgcgtcattttcttctcattggtcttc
attgctgcatgctcttctgggctggtgtttgtccgggtcaccaccaatcctgtggagctc
tggtcggcccctcacagtcgggcccgcatggagaaggagtactttgataagcactttggg
cctttttttcgcatggagcagcttattatccaggcccccaacaccagtgtccatatctat
gagccatacccttcaggatccgatgtgccctttgggcctccgttggacaaagagattctg
caccaggtgcttgacctacagattgccattgagagcattactgcatcttacgacaataag
accgtgacacttcaagacatctgtgtggcccccctctcgccatacaacaagaactgcacc
attatgagtgtgttaaattacttccagaacagccattcgatgctggaccaccaagtaggc
gatgacttctttgtctatgccgactaccacacacacttcctgtactgtacacgggctccc
acctctctgaatgacacaagtatgctccatgatccttgcctgagtacgtctggaacaccc
gtcttcccctggcttgtgctcggtggctatgatgatcagaactacaataatgccaccgct
cttgtgatcaccttccctgtcaacaattactataacgacacagagaagctccagagggcc
caggcctgggagaaagagtttgttaactttgtgaaaaactacaagaatcccaatctgacc
atttctttcattgccgagcgaagcattgaagatgaactcaatcgggaaagtaagagtgat
gtgttcactattgccgtcagctacgccatcatgtttctgtacatttcgcttgccttggga
cacatccagagctgtagccgacttctggtggattctaagatctcactgggcatcgcaggg
atcctgatcgtcctgagctcagtggcctgttccctgggcatcttcagttacatggggatg
ccactgaccctcattgtcatcgaagtcatcccattcttggtgctggctgtcggggtggac
aacatcttcattctcgtgcagacctaccagagagatgaacgtcttcaggaagagacactg
gatcagcaactgggcagaatcctcggggaagtggcccctactatgttcctttcatccttt
tctgagacctcagcatttttctttggggcgctgtcctccgtgccggctgtccacaccttc
tctctgtttgcgggcttggcggtcttcattgacttcctccttcagattacctgctttgtg
agcctcctggggttagatattaagaggcaagagaacaatcggctggacatcctgtgctgt
gtccgaggtgctggtgatggccgaggcgcccaggcctctgaaagcttcttgtttcgcttc
ttcaaaaactcctttgccccacttctgctgaaggactggctgcgaccagttgtgatagcc
gtatttgtgggtgttctatcattcagtattgcagtcgtgaacaaagtggaaattggattg
gatcagtctctttcaatgccaaatgattcctatgtgattgattatttcaaatcccttggt
cagtacctgcactcgggcccacctgtgtactttgtcctggaggaaggccatgactacacc
acccgcaaggggcagagcatggtgtgcggcggcatgggctgtgacagtgactccctggta
cagcagatatttaacgcagctgagctggacacctacacccggataggctttgccccgtcg
tcctggattgacgattactttgactgggtcgctccgcagtcctcctgctgtagactctac
aatgcctctcaccagttttgcaacgcttctgtgattgatccaacctgtgtccgttgcaga
cctctgacttcagagggcaaacagaggcctcaggggaaagagttcatgaaattcctgccc
atgttcctttccgataaccccaaccccaaatgtggcaaagggggacatgctgcctatggt
tctgctgttaacatcatcggagatgacacttatgttggggccacttacttcatgacttac
cacactgtacttaagacctctgctgactacattgacgccatgaaaaaagcccagcttgta
gctaaaaacatcacagaaaccatgaattctaaggggagtaactaccgcgtgttcccatat
agtgtgttctacgtcttctatgagcagtacctgaccattatcgatgataccatctttaac
ctcagcgtgtctctgggctccatatttctggtgactttggtgattctgggctgtgagttg
tggtcagcagtcatcatgtgtgtcaccatagctatgatcctggtcaacatgttcggtgtc
atgtggctgtggggtatcagtctaaacgctgtttccttggtcaacttggtgatgagctgt
ggcatttccgtggagttctgcagccatataacaagagcattcaccatgagtaccaaagga
agccgagtgagccgagcggaagaggcgctggcccacatgggtagttctgtattcagtgga
atcacacttacaaaatttggagggattgtggtgttggcctttgccaaatctcagattttt
gagatattttacttcaggatgtacttagccatggtcttactcggagccactcacgggctg
atatttcttcctgtcttactcagctacgtaggaccgtcggtaactaaagctaaaagacag
accactcaagatcgatacaaagggacagagcgagaacggctcctcaatttttag
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