Microtus oregoni (creeping vole): 121453628
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Entry
121453628 CDS
T08307
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03015
mRNA surveillance pathway
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121453628
09123 Folding, sorting and degradation
03018 RNA degradation
121453628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121453628
03041 Spliceosome [BR:
morg03041
]
121453628
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121453628
mRNA cycle factors
Stress granule specific factors
121453628
Spliceosome [BR:
morg03041
]
Complex C
Other components
Complex C specific factors
121453628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RRM_occluded
RBD_RDR6
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
121453628
NCBI-ProteinID:
XP_041516454
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNPSAPGCPMASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFE
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFS
AFGNILSCKVVCDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
TELGARAKEFTNVYIKNFGDHMDDETLSDLFGRFGQVLSVKVMTDEGGKSKGFGFVSFEK
HEDAQKAVEEMNGKELNGKHIYVGRAQKKVDRHTELKRKFEQVTQDRNIRYQGINLYVKN
LDDGIDDERLQKEFSPFGTITSTKVMMEGGRSKGFGFVCFSSPEEATKAVSGMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMAGVRAVMNPYQPAPSGYSMATLPQTQNCVPGCPS
QMTQPRPSARWTAAGARPHPFPNVPAVIHPAAPRSSLSTVRPGPSHIPQAASAHRVTNTS
AQTVGQHPAAAAAAAVSAATTSARSVPKYKFAAGVRNPQQLLTAQLVQQPAVRAQAQEPW
TASMLVTAPQEQKQMLDERLFPFIQAVHPSLAGKITGMLLEMDNSEPLQMLKSPESLCSN
DDEAVALLQAHQAKEAVQKAVSSVSGVLPI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgccccaggctgccccatggcttcgctctacgtaggggacctgcacccg
gatgtgaccgaggcgatgctctatgagaaattcagctcggccgggcccatcctttccatc
cgggtgtacagggacgtaatcacccgtcgctccctaggctatgcttccgtgaacttcgag
cagcctgcagacgcagagcgcgctttggacaccatgaattttgatgtcatcaagggcaag
ccggtccgcatcatgtggtctcagcgtgatccgtcactacgcagaagtggagtaggcaac
gtgttcattaaaaatttgaacaaaaccattgataacaaagcgctatatgatacattttct
gcttttgggaacatcctttcctgcaaggtggtttgcgatgagaatggctccaaggggcac
ggatttgtacattttgaaacagaggaggcagcagaaagagccattgagaaaatgaacggg
atgcttctgaatgaccgtaaagtgtttgttggacggtttaagtctcgaaaagaacgggaa
acggagcttggagcaagggccaaggagttcaccaatgtttacatcaagaactttggggac
cacatggatgatgagaccctgagtgacctctttggcaggtttggacaggtcttaagtgtg
aaagtcatgaccgatgaaggtggaaaatccaaaggattcgggtttgtcagctttgaaaag
catgaagatgcgcagaaagcggtggaggagatgaatggaaaggaactcaatggcaaacac
atttatgttggtcgagctcagaaaaaagtggaccggcacacagagcttaagcgcaaattt
gagcaagtgacccaagacaggaacatcagataccaaggtattaacctttacgtgaaaaat
cttgacgatggcatagatgacgagcgtctacagaaagaattttctccgtttggaacgatc
accagtacaaaggttatgatggaggggggtcgcagtaaagggttcggttttgtgtgtttc
tcctcccccgaagaagctaccaaagcagtttcgggaatgaatggtcgaattgtggccacg
aagccactgtatgtagctttagcccagcgcaaagaagagcgtcaagctcacctcactaac
cagtatatgcagagaatggcaggtgtgagagctgtgatgaacccctaccaacccgcgcct
tcaggttactccatggccactctcccacagactcagaactgtgtgccaggctgccctagc
cagatgactcaaccaaggccaagtgctcgctggactgctgcgggtgccaggcctcatcca
tttccaaatgtgcctgctgttatccacccagctgctcctagatcatcacttagtactgta
agaccaggtccttcccatattcctcaagcagcgtccgcacatcgcgtaactaacacatca
gcacagacagtgggtcaacatcctgcagcagcagctgcagctgcagtttctgcagcaact
acttctgctcgctcggttccaaagtataaattcgccgcgggagtccgcaacccccagcaa
cttcttaccgcacagctggtgcagcagcctgctgttagggcacaggctcaggaaccttgg
actgcttccatgttggtcaccgctcctcaagagcaaaagcaaatgctggatgaaaggcta
tttcctttcattcaagccgtgcacccgagtcttgctggtaagatcacgggcatgttgctg
gagatggataactcagaaccacttcagatgctgaagtctccagaatctctgtgctctaac
gatgatgaagctgtagccttactccaagcccaccaagctaaagaggctgtccagaaagct
gttagcagtgtttctggtgtcttgcctatttaa
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