Microtus oregoni (creeping vole): 121454118
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Entry
121454118 CDS
T08307
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121454118 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121454118 (Taf5)
03036 Chromosome and associated proteins [BR:
morg03036
]
121454118 (Taf5)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121454118 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
121454118 (Taf5)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121454118 (Taf5)
STAGA complex
121454118 (Taf5)
TFTC complex
121454118 (Taf5)
SAGA complex
121454118 (Taf5)
SLIK complex
121454118 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
121454118
NCBI-ProteinID:
XP_041517255
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQTGDGAGEGSGGTPNNGPNGGGGNVAAVAATAAP
GGDGGTPNPVVAVSAAAPAGAAPVSAAPTEAGAPHDRQTLLAVLQFLRQSNLREAEEALR
REARLLEEAVAGSGAPGELDGAGAEAASALLSRVTASVPGSAAPDPPGSGASGATVFSGS
ASGPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPAMYEEYYSGLKHFIECSLDCHRAELS
QLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETM
LDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVG
SLAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSAGSKSKKQ
DPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVD
VTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELK
ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG
YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL
NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL
RFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKS
TPVVHLHFTRRNLVLAAGAYSPQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccgcagactggcgacggcgcaggcgagggtagcggtggcactccc
aacaacggccccaacggcggcggcgggaatgtggcggccgtggcggcgacggcggcgccc
ggcggggatggcgggacccccaatcccgtggtggccgtctctgccgctgccccggcgggg
gcggccccggtgtccgccgctcccacagaggccggcgctccccacgaccggcagaccctt
ctggcagtgctgcagttcctccggcagagcaacctccgcgaggccgaagaggcgctgcgc
cgtgaggccaggctgctggaggaggctgtggcgggctccggagctccgggagagctggac
ggggccggcgcggaggcggctagcgcgcttctcagccgggtcaccgcttcagtccccggc
tctgcggcccctgaccctcctggcagcggcgcttcgggggccacggtattctcgggttca
gcctcaggtcctgcggctccaggaaaagttggaagtgtagctgtggaagaccagccagat
gtcagtgctgtcttgtcggcctacaaccaacaaggagaccctgcaatgtatgaagaatac
tacagcggactgaaacacttcattgaatgttctctggactgccatcgagcagaattatcc
caactcttttatcctctgtttgtacacatgtacttggagctagtttataatcaacatgaa
aatgaagcaaaatcgttctttgagaagttccatggagatcaggaatgttattaccaggat
gacctacgagtattatctagtcttaccaaaaaggagcatatgaaagggaatgaaaccatg
ctggactttcgaacaagtaaatttgttctccgtatttcccgtgactcttaccaactcttg
aagcggcatcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctc
tacattgacatctttgatgggatgcctcgtagtaagcaacagatagatgccatggtggga
agtctcgctggagaggctaagcgagaagcaaacaaatcaaaggtattttttggtttatta
aaagagccagaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaa
ggaaaacctaaaaagaagaagcctaagaaggatagtgctgggtctaaaagcaagaaacaa
gatcccaatgcccctcctcaaaacagaatccctctccctgagttgaaagattcagacaaa
ctggacaaaataatgaatatgaaagaaacgaccaaacgagtgcgccttgggcccgactgc
ttgccctccatttgtttttacacattcctcaatgcttaccagggcctcactgcggtggat
gtcactgatgattccagtctgattgctggaggttttgcagattcaactgtcagagtgtgg
tctgtgacacctaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagac
aaagaatcagatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaag
attttgtatggtcacagtgggcctgtctatggagccagcttcagtccggataggaactat
ctgctctcctcttcagaggatggaactgttagactctggagccttcagacgtttacttgc
ttggtgggatataaaggacacaactacccagtatgggacacacagttttctccatatgga
tattattttgtgtcaggaggccatgaccgagtagctcggctttgggctacagatcactat
cagcctttaaggatatttgctggacatcttgctgatgtgaactgcactagatttcatcca
aattcgaactatgttgctacgggctctgcagacagaactgtgcggctctgggatgtgctc
aatggtaactgtgtcaggatcttcactggacacaagggaccaattcattccttgacattt
tctcccaatgggagattcctggctacaggagcaacagatggcagagtacttctttgggat
attggacatggcttgatggttggagaattaaaaggccacaccgatacagtgtgttcactt
aggtttagtagagatggtgaaattttggcatcaggttcaatggataatacagtccggtta
tgggatgccattaaagcatttgaagatttagagactgatgactttactaccgccactggg
catataaacctacctgagaattcccaggagttattattgggtacatatatgaccaaatca
acaccagttgtacacctacattttactcgaagaaacttggttctagctgcaggagcttac
agtccgcaataa
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integrated database retrieval system
