Microtus oregoni (creeping vole): 121454210
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Entry
121454210 CDS
T08307
Symbol
Trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
morg03016
]
121454210 (Trub1)
Enzymes [BR:
morg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121454210 (Trub1)
Transfer RNA biogenesis [BR:
morg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121454210 (Trub1)
Prokaryotic type
121454210 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
121454210
NCBI-ProteinID:
XP_041517384
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MAAAEAEVASPPIADAASDAAETAAVVAARTSSPAQVSKAALAAKLLSLSGVFAVHKPKG
PTSAELLNRLKEKLLAEAGMPSPEWHKRQKQTLKIGHGGTLDSAAQGVLVVGIGRGTKML
TSMLSGSKRYIATGELGKATDTLDSTGKVTDEKPYDKITQEDIEGVLQKFTGNIMQVPPL
YSALKKDGQRLSTLMKRGEAVEARPARLVTVYSISLLRFQPPLFTLDVECGGGFYIRSLV
NDIGKELSSCANVLELTRTKQGPFTLEEHALPEDRWTIDDITQALQHCPSLLPEESAFKK
PKSEKSNDQVLSYEYITLSETKREEDAIKTL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcagaggtggcgtcccctccgattgccgacgcagcctctgatgct
gcagaaacagccgccgtggtagcggcccggaccagttcgccagcccaggtctccaaggca
gccctggctgctaagctgctgtcgctcagcggcgtgttcgccgtgcacaagcccaaaggg
cccacttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatg
ccttccccggaatggcacaagaggcaaaagcagacattgaaaattgggcacggagggacg
ctggacagtgctgcacaaggggtgctggtggttgggattggaagaggaacaaaaatgttg
accagcatgctgtcggggtccaagaggtatattgccactggagaactggggaaagctacc
gacacactggattctactgggaaggtaacggacgagaagccatatgataaaataacacaa
gaagatattgaaggcgttctgcagaagttcactgggaatataatgcaagtccccccactc
tattctgcgctgaagaaggatggccaaaggctttcgacgttaatgaagagaggcgaagcg
gttgaggccagacctgccagactagtgactgtctacagcatctccctcctgaggttccag
ccaccgctcttcacattagatgttgagtgcggaggaggcttttacatcagaagcttggtc
aatgacattggcaaagagctttcttcctgtgccaacgtgctggagctgacccgcaccaaa
caggggccatttacccttgaggagcacgccctccctgaagacagatggaccatcgatgac
atcacacaggcccttcagcactgcccatcccttctgccagaggagtcggcgtttaaaaag
ccaaaatctgagaaatccaatgaccaggttttaagctatgaatatataactctaagcgag
acaaagagagaagaggatgcaattaagaccctctga
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