Microtus oregoni (creeping vole): 121454342
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Entry
121454342 CDS
T08307
Symbol
Smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
morg03400
]
121454342 (Smc5)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121454342 (Smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
CEP135_TSGA10_CC
AAA_29
AAA_25
SMC_hinge
FlgK_D1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
121454342
NCBI-ProteinID:
XP_041517565
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MATPSGKTMIPNPQASKRTLSSEASSEVPSKRKNSNPTSTLPRPSGPFVEGSIVRIAMEN
FLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSK
GVVEIELFRTSGNLIITREIDVIKNQSFWFINKKPVSQKIVEEQVAALNIQVGNLCQFLP
QDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREREKQLETSCKEKSEYLEKMV
QRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGVKLVRDRVKEEVRKLK
EGQVPMTRRIEEIERQRRTLETRIKEKATDIKEASQKCKQRQDLIERKDRYIKELQQALT
VKQNEEQDRQKRISNTRKMIEDLQNELRTVENCENLQPQIDAITNDLRRVQEEKGSCEGE
IIDKQREKEMLEKQKRSVGDHIIRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDRFKQR
VCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRVNAVIA
PKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERI
ERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLK
EINRKLEAVESGLVTLRDTNKHLELKDNELRLKKKELLERKTKKRQLEQKISSKLGSIRL
MEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSLHIQKVDLILQNTTVISE
KNKLEADYMSSSSQLRLIEQQFIELDENRQRLLQKCKELMKRARQVCNLSADQAVPQEFQ
TQVPTIPNGHNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYSRREIEI
QQLTEELKGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHT
ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE
INQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEP
NRWNLKAFQRRRRRITFTQPSQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagcgggaagactatgatcccgaatccccaggcttccaagaggactctc
tccagtgaggcttcctctgaggtcccgagcaagagaaagaactcgaacccgacgtcgacc
ctgccgcgtccatccgggcctttcgtggagggctcaatcgtccgcatcgccatggagaac
ttcttaacatacgatatctgtgaagtgtctcctgggccccatctcaatatgattatcgga
gctaacggaacggggaagtcaagtatagtgtgtgccatttgccttggactagcaggcaaa
cccgcgttcatgggacgtgcagataaggttgggtttttcgtgaagagaggatgttccaaa
ggtgtggttgaaattgaactgttcaggacttcgggaaatcttataatcacccgtgagatt
gatgtgataaaaaatcagtcattttggtttatcaacaaaaaacctgtgtcccagaaaatc
gtggaagaacaagttgcagccttaaacatccaagtgggcaatctgtgccagttcctgcct
caggacaaagttggggaatttgctaaactcagcaaaattgagctgcttgaagctactgag
aagtcaattggtcctccagagatgcacagataccactgtgagctcaaaaacttcagagag
agggagaagcaactagagacctcttgcaaagagaaaagtgaatacctagagaaaatggtt
cagagaaatgaaagatacaaacaagatgtggaaagattctatgaacgaaagcgacattta
gatttaattgagatgcttgaggcaaaaagaccatgggtggaatatgagaatgtacgtcag
gaatatgaaggtgtgaaactagttcgtgatcgagtgaaggaagaggtcaggaaacttaaa
gaggggcaagttcctatgacacgtcgaattgaggaaattgaaaggcagcgtcgtactttg
gaaactcgaatcaaagaaaaggcaactgatattaaggaagcatctcagaaatgcaagcaa
aggcaagaccttatagaacggaaggatagatatattaaggaacttcagcaggccttaaca
gtcaaacagaatgaagaacaagaccggcagaagagaataagcaacacgcgcaagatgata
gaggacttgcagaatgaactcaggactgtggagaactgcgagaaccttcagcctcagatt
gatgccatcacaaatgatctgaggcgagttcaggaggaaaagggatcgtgtgaaggagag
atcattgacaagcaaagggaaaaggagatgctagagaagcagaaacggagtgtgggtgat
catatcatacgttttgacaatctaatgaatcaaaaggaagataaactgagacagcggtac
cgggacacatacgatgctgtcttgtggctcagaaataacagagataggtttaaacaaaga
gtctgtgagcccataatgctcacgattaatatgaaagataataaaaatgcaaaatatgtt
gaaaatcatatttcatcaaatgacttaagagcctttgtgtttgaaagtcaagaggatatg
gagattttcctcagagaggttcgtgacaataagaagttaagagtaaatgctgttattgct
cccaagatttcttacgcagacaaagcgccttcaagatctctgaatgagttaaaacagtat
ggctttttttcatatttgcgagagctatttgatgcacctgaccctgtgatgagttatctt
tgctgccagtatcatattcatgaagttcctgtgggaaccgaaaggactcgagaaagaatt
gaacgggtaatacaagaaactcgattaaaacaaatttatacagcagaagaaaagtatgtg
ttaaaaacttctttctattcaaataaagttatttctagtaacacatccctgaaagtagcc
cagttcctcactgtcactgtggatctagaacaaagaagacacttggaagaacagctaaag
gaaattaatagaaaattggaagcagtggaatcaggattggtgaccttacgtgatacgaac
aagcatctcgagctcaaagacaatgagctgagactgaaaaagaaggaacttcttgaaaga
aaaaccaaaaaaagacaactggagcagaaaatcagctccaagctgggaagtataagactg
atggaacaggatacttgcaatctggaagaagaagaacgaaaagcgagtaccaaaattaaa
gaaataaacgttcagaaagcaaaacttgttactgaattaacaggcctagtaaagatttgc
acttctttgcacatacaaaaagtcgatttgattcttcagaatactacagtgatctctgag
aagaacaaattagaagcagattacatgtcatcatcttcacagctgcgtctcatagagcaa
caattcattgaattggatgaaaatagacagagattgttacagaaatgcaaggaacttatg
aagagagctaggcaagtatgtaacctgagtgcagaccaagccgttccccaagaatttcag
acacaagtacccaccattccaaatggacacaactcctcaccccccatggcttttcaagat
cttccaaatacattggatgaaattgatgcattattaactgaagaaagatcaagagcttct
tgcttcacaggactgaatcctacagtggttgaagaatactcaagaagagaaattgaaata
cagcaattaactgaagaactaaaagggaagaaagtcgaactagatgaatatagggaaaat
atttcacaggtgaaagaaaggtggctgaaccccttaaaggagctagtggaaaaaatcaat
gagaagttcagcaacttttttagttctatgcagtgtgctggtgaagttgatcttcataca
gaaaatgaggaagattatgataaatatggaatccgaattagagtaaaatttcgcagtagt
actcagctgcatgaattaactcctcaccatcaaagtggaggggaaagaagtgtttctacc
atgttgtacttgatggcacttcaggagcttaatagatgtccattcagagtagttgatgaa
atcaatcagggtatggacccaatcaatgaacgaagagtgtttgaaatggttgtgaacact
gcctgtaaagaaaacacatcccagtacttcttcatcacaccaaagcttctacaaaatctt
ccttattctgagaaaatgacagtattgtttgtctacaatggtcctcatatgttggaacca
aaccgatggaatttaaaggcttttcaaaggcggcggcgaaggattaccttcactcaacca
tctcagtga
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