Microtus oregoni (creeping vole): 121454618
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Entry
121454618 CDS
T08307
Symbol
Patl1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121454618 (Patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121454618 (Patl1)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121454618 (Patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
121454618 (Patl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
121454618
NCBI-ProteinID:
XP_041517965
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAADEQAGSRERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPRS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAIPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPTTPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQSRNQHRNLNGAGDRGSHRTSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALVDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSATAPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPAIESTQNNQWTEVMFM
ATRELLQIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctagatgaagatgaagatgcatttcaa
ggcctgggagaagaagatgaagaaatcgatcaattcaatgatgatacgtttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgagctggaagagaagcta
cctgcggcagctgatgaacaagcaggcagtagagagagggatgagatggacctgttgggt
gaccatgaggagaatctcgcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagctatcatgagagcagtgcagacgaggccagttttacaacctcaacccagaagt
ctgaattccagcatctgggatggatctgaagttctgaggcgaatccgtggaccacttctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagcggcccccacag
ggcccagaagatgatcgggacctttctgagcgagctttaccaaggcggtcaacatcacct
gtcattggaagtcctcctgttcgagctgttcctataggcaccccacctaagcagatggcc
attcccagcttcaaccaacagattctgtgtccgaagcctgttcatgtacggcccccaatg
ccaccacgttatcctgctccctatggtgagaggatgtcaccaaaccagctctgcagtgtc
ccgaactcctcccttctgggccacccttttccgcctagtgttcctcctgtacttagtccc
ctgcagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagccccctggctgccatgaatcctaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccccccactacaccacccccccagcagcatcctcctggcccaggacctcacctg
caaaacctaagatctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccggcgcctgttgcatcagaggcagcagcagagcagaaatcagcatcggaatctcaat
ggtgcgggagacagaggaagtcaccggaccagtcatcaagatcatctccggaaggatccc
tatgctaatctcatgttgcagcgggagaaggactgggtctctaaaatccagatgatgcag
ctgcagagcactgatccctacctggatgatttctattaccagaattactttgaaaaactg
gagaaattgtcagctgctgaagaaatacaaggtgatggtcctaagaaggagcgtaccaag
ctcatcaccccccaggtggccaaactggagcatgcttataagcctgtgcagttcgagggc
tctttgggtaagcttactgtctctagtgtgaataatcctcggaagatgatcgatgctgtt
gtgacgtctcggagtgaggatgatgaaacaaaagaaaaacaagttcgggacaagagaagg
aaaacccttgtcataattgagaaaacctatagtttactccttgatgtggaagattatgaa
aggcgctatctcctaagtttagaagaagagcggcctgccctggtggatgaaagaaagcac
aaaatctgtagcatgtatgacaacctgaggggcaaattgcctggacaagagaggccaagc
gatgaccacttcgtacagatcatgtgtatccgaaaaggaaagagaatggttgcccgcatt
ctccctttcctctccacagagcaagcagctgacattctcatggcaactgccaggaacctc
cctttccttatcaagaaggacgcacaagatgaggtgctgccatgcttactgagtcccttc
tctcttctcctctatcatcttccttcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcaaagtgcaactgcaccagcaccctccaatcctcacctcactgctgtgcta
cagaacaagtttggcttgtcactgctcctaatcctcctaagccgcggggaagacctacag
agttcggaccctgctatagagtcaacacaaaataaccagtggacagaggtgatgttcatg
gcaaccagagaacttctacagataccccaagcagccttggccaagccaatttctataccc
acaaatctagtgtcccttttttctcgctatgttgaccggcagaaactgaacttgctggag
acaaaactacagctggttcaggggatacgataa
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