KEGG   Microtus oregoni (creeping vole): 121455755
Entry
121455755         CDS       T08307                                 
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03420  Nucleotide excision repair
morg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121455755 (Ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121455755 (Ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:morg04121]
    121455755 (Ercc8)
   03400 DNA repair and recombination proteins [BR:morg03400]
    121455755 (Ercc8)
Ubiquitin system [BR:morg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121455755 (Ercc8)
DNA repair and recombination proteins [BR:morg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121455755 (Ercc8)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD_LRWD1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_RIG_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_WDR11_1st Beta-prop_HPS5 Cytochrom_D1
Other DBs
NCBI-GeneID: 121455755
NCBI-ProteinID: XP_041519361
LinkDB
Position
Unknown
AA seq 397 aa
MLSFLSARQTGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQVADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLLTLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLSVGTDNRMRLWNSSSGENTLVNYGKVCIDSRKGLKFTVS
WGCSSEFVFVPYGSTIAVYAVHSGEQLTVLRGHYKSVDCCVFQPHFQELYSGSRDCNILA
WVPSLYEPIPDDDDEATTKSQLNPAFVDAWSSSDEEG
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgttgagttttctgtccgctcgacagacgggtttggaggaccctcttcgtttgcggaga
gcgcagtccacacggagggtcctgggactggagttaaacaaagacagagatgttgaaaga
atccattgcagtggagttaacactcttgacattgagcctgttgaaggaagatacatgtta
tcgggtggttcagatggtgtgattgtactctatgaccttgagaacgccagcagacaaccc
tattacacatgtaaagcagtgtgttccgttggcagaagccatcctgatgttcacaaatac
agcgtagagactgttcagtggtaccctcatgacacaggcatgttcacttccagctcattc
gataaaactctgaaagtgtgggatacaaatacattgcaggttgcagatgtgtttaacttt
gaggaaacggtttatagccatcacatgtctccagcagccaccaagcactgtctggtagca
gttggtactagaggacccaaggtacaactttgtgacttaaagtctggatcctgttctcac
attctacaaggtcacagacaagaaatattggcagtttcctggtcaccacgctacgactat
atcttggcaacagccagtgctgacagtagagtgaaattatgggatgtgagaagagcatca
ggatgtttgctcactctagatcagcataatgggaagaagtcacaagctgttgaatcagca
aacactgctcacaatgggaaagttaatggcttatgttttacaagtgatggacttcacctg
ctcagtgttggcacagacaaccgaatgaggctctggaatagctccagtggggagaacaca
ctggtgaactatgggaaggtctgtattgacagcaggaaaggactaaagttcactgtctcc
tggggctgcagctcagagtttgtttttgttccatatggcagcaccattgctgtctatgcc
gttcactcaggagagcagctgactgtgcttaggggacattataagagtgtcgactgctgt
gtgttccagcctcatttccaggaactgtacagtggtagcagggattgcaatattcttgct
tgggtaccatctttatatgaaccaatacctgacgacgatgatgaagctacgactaaatcc
cagttgaatccagcgtttgtggatgcatggagcagcagtgacgaagaagggtga

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