Microtus oregoni (creeping vole): 121455779
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Entry
121455779 CDS
T08307
Symbol
Ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121455779 (Ddx39a)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121455779 (Ddx39a)
Spliceosome [BR:
morg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121455779 (Ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121455779
NCBI-ProteinID:
XP_041519395
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVR
SRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaagatgtggaaaatgagcttttggactatgatgaagatgaagagccccaa
gcaccccaggagagcactccagctcccccaaagaaagatgtcaaagggtcttacgtgtcc
attcacagttccggtttccgggactttctgctgaagccggagctcctgagagccatagtt
gactgtggctttgagcatccttcagaggtccagcatgagtgtattccccaggccattctg
ggtatggatgtcctgtgccaggccaagtctgggatgggtaagacagctgtgtttgtgctg
gccaccctgcagcagatcgagcccatcaatggccaggtatcagtactggtcatgtgccat
acaagggagctggccttccagatcagcaaggaatatgagcgcttctctaagtacatgccc
agcgttaaggtatctgtgttctttgggggcctttccattaagaaagatgaagatgtgttg
aagaagaactgtccccatgttgtggtggggacaccaggccggatcctggcactcgtacgg
agcaggagcctcaacctaaggaatgtgaagcactttgtgctagatgagtgtgacaagatg
ctggagcagctggacatgcgccgggacgtgcaagagatctttcgcctgacaccccatgaa
aagcagtgtatgatgttcagcgccaccctgagcaaggagatccggccagtctgcaggaag
ttcatgcaggatcccatggaagtgtttgtggatgacgagaccaagctcacactgcacggc
ctacagcagtactatgtcaagctcaaggacagcgagaagaaccggaaactctttgacctc
cttgacgtcctagagtttaaccaggtggtgatctttgtcaagtctgtgcaacgctgcatg
gccctggcccagctcctagtggaacagaacttcccagccattgccattcaccgaggcatg
ccccaggaggagcgcctgtcccgctaccagcagttcaaagacttccagcggcgcatcctg
gtagctaccaatctgtttggtagaggtatggacattgagcgagtgaacatcgtcttcaac
tatgacatgccagaggactcagacacctaccttcaccgggtggctcgtgctggtcgcttt
ggtactaaaggcctggcggtcacttttgtatctgatgagaatgatgccaaaatcctcaat
gatgttcaggaccggtttgaagtgaatgtggcagagcttccagaagaaatagatatctct
acatacattgaacagagccgataa
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