Microtus oregoni (creeping vole): 121456066
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Entry
121456066 CDS
T08307
Symbol
Lig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121456066 (Lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
morg03400
]
121456066 (Lig3)
Enzymes [BR:
morg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121456066 (Lig3)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
121456066 (Lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
121456066
NCBI-ProteinID:
XP_041519808
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MTLAFKILFPRNLCALGRKELCLFPEQNYWSAIRQFSQWSETDPLRGCRLLQRKKSVLSF
QRGHLRPRATHLVFFPGSYVGLCTSPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKAAGTPKKKAAVQAKLTTTGQVTSPAKGASFVTSTNPRKFSGFSAAKANNSEQ
GPSNPAPKTSLSASKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSTGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDEMARDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKV
AHFKDYIPRAFPGGESMILDSEVLLIDNNTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
DSQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKK
AAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADF
TVVAGDEGSSTTGGSNGESEGTAGSAVPHKAPKTPPSKSSASGRKTEQKLNNSNSRGGNK
VIPKPSPMKPGDKLTTKSSPVKVGVKRKAADETQCPTKVLLDVFTGVRLYLPPSTPDFKR
LKRYFVAFNGDLVQEFDMASATHVLGNRENNTEAQLVSPEWIWSCIRKRRLTAPC
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccgagaaacctttgtgcccttggcagaaaagaa
ctgtgcctgttcccagaacagaattactggtctgccataagacaattcagccagtggtcg
gaaacagatcctcttcgtgggtgccgcctcctccagagaaaaaagtctgtcctatctttc
cagagagggcatctaagaccacgtgccacccaccttgtcttcttcccagggtcgtatgtg
ggactctgtactagcccctgtgagatggcggagcagcggttctgtgtggactatgccaag
cggggtacagctggctgcaagaaatgcaaggagaagattgtaaaaggcgtatgccgcatt
ggcaaagtggtgcccaatcccttctccgagtctgggggcgatatgaaagagtggtaccat
attaagtgcatgtttgaaaaactggagcgggcgcgggctaccacaaaaaaaatcgaagat
ctcacagagctggaaggctgggaagagctggaagataacgaaaaggaacagataagccag
cacattgcagacctatcttctaaggcagctggtacaccaaagaagaaagcggctgtccag
gctaagctgacaaccactggccaggtgacatccccagcaaaaggtgcttcgtttgtcacc
agtaccaatccccgaaaattttctggattttcagcagccaaagccaacaactctgagcaa
ggcccctcaaaccctgctcctaagacaagtttgtctgcaagtaaatgtgaccctaagcac
aaagactgtctactgcgagagttccggaagctgtgcgccatggtggccgaaaaccctagc
tacaatacaaagacccagatcatccaggactttttgcagaaaggctctacaggagatggc
ttccacggtgatgtgtacctaacagtgaagctgttgctgccgggagtcattaagagtgtt
tacaacttgaacgataagcagattgtgaaactttttagccgcatttttaactgcaaccca
gatgagatggcccgggatctggaacagggtgacgtgtctgagacgatcagagtcttcttt
gagcagagcaagtctttccccccagccgccaagagcctcctcaccatccaagaagtggat
gccttcctcttgcacctctccaagctcaccaaagaggatgagcagcagcaagccctgcag
gacattgcctccaggtgtacagccaatgaccttaagtgcatcatccggttgatcaaacat
gatctgaagatgaactcaggtgcaaaacacgtgttagatgctcttgaccccaatgcttat
gaagccttcaaagcctcacgcaacctgcaggatgtggtggagcgagtccttcacaatgag
caggaggtggagaaggacccaggtcggcgacgggctctgagcgtccaggcctcactgatg
actcctgtgcagcccatgctggctgaggcctgcaagtccatcgagtatgcaatgaagaag
tgtcccaatggcatgttctctgagatcaagtacgatggtgagcgagtccaggtgcataag
aagggggaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtg
gcccactttaaggactacatccccagagcttttcctgggggtgagagtatgatcttggac
tccgaggtgctcctgattgacaacaacacaggcaaaccactgccgtttgggactctggga
gtgcacaagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatc
tactttaatgatgtcagcttgatggacaggcctctttgtgagcgacgcaagtttcttcat
gacaacatggttgaaatccgtaaccggattatgttctcagaaatgaagcaagtcacaaaa
gcctcagacctggctgacatgataaaccgggtgatccgagagggcttagaagggctggtg
ctgaaggatgtgaagggtacatacgagcctgggaagcggcactggctaaaagttaagaaa
gattatttgaacgagggggccatggccgatacagctgatctggtggttcttggggccttc
tatgggcaagggagcaaaggcggcatgatgtccatcttcctcatgggctgctatgatcct
gacagccagaaatggtgcactgtcaccaaatgttccggaggccatgatgatgccacactt
gctcgactgcagaaggagctagacatggtgaagatcagcaaggatcccagcaagataccc
agttggctgaagatcaacaagatctactatcctgactttattgttcccgacccaaagaaa
gctgctgtgtgggagatcacgggagcagaattctccaaatctgaggctcacactgctgat
gggatctccatccgatttcctcgctgcacccgaattcgggatgataaggactggaaatct
gcaactaacctccctcaactcaaggaactgtaccagctgtccaaagaaaaggcagacttc
accgtagtggctggagatgaggggagctccactactggaggtagcaatggtgagagtgag
ggcactgctgggtctgctgtaccccacaaggcccccaagacacctcccagtaagtcctct
gccagtggaaggaagaccgaacagaagctgaataactccaatagcagaggtggcaacaag
gtgattccaaagccttcccccatgaaaccaggagacaagctgaccacgaagtcttctcca
gtgaaagtgggggtgaagaggaaagctgctgatgagacccaatgccctacaaaggtgctg
ttggatgtcttcaccggggtgcggctctacttgccaccttccacaccagacttcaagagg
ctcaaacgctactttgtggcattcaacggggatctggtacaggaatttgacatggcctca
gccacacatgtgctgggtaacagagagaacaatactgaggcccagctggtctctccagag
tggatctggtcatgtatccgaaaacggaggctgacagccccctgctag
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