Microtus oregoni (creeping vole): 121456290
Help
Entry
121456290 CDS
T08307
Symbol
Utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
morg03009
]
121456290 (Utp20)
Ribosome biogenesis [BR:
morg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121456290 (Utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
121456290
NCBI-ProteinID:
XP_041520269
LinkDB
All DBs
Position
Unknown
AA seq
2788 aa
AA seq
DB search
MKTKPLSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEALLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQHEIVQSLKTHLQIRNSFAYQPLLDLVVQLARDLQT
DFYPHFEDFFMTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMPKIYSLYSALLAH
KKLHIRNFAAESFTFLMRKVPDKNALFNLMFLDLSEHPEKVEGVGQLLFEMCKGVRNMFH
SCSGQALKLILQKLGPVTETEAQLPWILVGETLRNMARSTVGYIYKEHFGVFFDCLQESL
LELHNKMTEINCCENSEQISRLLETFLILVKHGSGSKITRPADVCRVLCEALQTANLATS
CRKTLLDVVSALLLAESVSLPETLIKDTIEKIFESKFERRLILDFSEVMFAMKQFEQLFL
PSFLCYIETCFLMDDSVVSDEALAILAKLILNKAAPPTAGSMAIEKYPLDFSQQAVGSYL
KQRKTNSKRREQSPVLDHLLSIVQLPPSNDARYLSQSWAALVVLPHIRPLEKEKVLALLS
CFIESLFVAVDKGSFGKGCLFVLCQAVNTLLSLEDSSELLHLVPVEHVKNLVLTFPTEPS
VLLLADLYYQRLALCGCKGPLSEEALMELFPKLQTNISTGVSKIRLLTIRILNHFDIRLP
ASVEDDGLSEPQSAFVILRQAELVPATVSDYREKLLHLRKLRHDVVQDAVPPGPLQEVPL
RYLFAMLYVNFSALWDPVIELISSHAHGMENKQFWSVCYEHLEKAASHAEKELQKDVGDE
EQSTGDGGEPTQEGDVGSLYQQQLTLRTSCRERLDHTNFRFLLWRALAKFPERVEPRSRE
LSPLFLRFITNEYYPADLQVAPTQDLRRKSRGAVAEEVEEEPAVGEEEEVEEEAVPTDEA
PQRRKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQTVQKITLDCIM
TYKHPHILPYRENLQRLLDDRSFKEEIVHFSLSEESAVVKAAHRVDLCPVLMRILYGRMK
NKTGSKTQGKSASGTRMAIVLRFLAGTQPEEIQFFLDLLSEPVKHFKNGECCSAVLRAVE
DLDLSKVLPVGRQHGILNSLEVVLKNVSHLISAYLPKILQILLCMTAAISHILDQREKIQ
LRFINPLKNLRRLGIKMISDIFLDWESYQFRAEEIDAVFHGAVWPQVCRLGSESQYSPTP
LLKLISIWSRNARYFPLLAKQRPGHPECDVLTNVFAVLSAKNLSDATASIVMDIVDDLLN
LPDFEPTETVPSLPVTGCVYAEVADDTEPLTVGGRLILPHVPAILQYLSKTTISAEKVKK
KKNRAQVSKELGILSKISKFMKDREQSSLLITLLLPFLLHGNVAQDTELDILVTVQNLLQ
HCLNPTSFLKPLAKLFSVIQNKLSRQLLCTVFQSLSDFESGLKYVTDIVKLNAFDKRHLD
DINFDVRFSAFQTITSTVKEMQTVDADYLVPVMHNCFYNMEVGDMSLSDNASMCLTSIIQ
RLAALNITEKEYKEIIHRTLLERLRKGLKSQTESVRHDYTVILSCLIQTFPNQLEFKDLV
QLTHRHDPEMDFFENMKHIQVHRRARALKKLAKQLLDGQVVLSSKSLQNYIMPYAMTPIF
DEKMLKHENITIAATEVIGAVCRHLSWPAYVYYLKHFIHVLQSGQVNQKLGVSLLVIVLE
AFHFDYKSFEEQMGNVTSEENTVEMAEVLEHEDTELEPMDEEEKEQACKSSSSDGKEPLE
APEAADSGGTTATEQECIPKSLSFLPRNKEELERTIKTIQGAITGDILPRLHKCLASATK
REEEHKLVKSKVVNEEEVVRVPLAFAMVKLMRSLPQEVMEANLPSVLLKVCVLLKNRAQE
VRDIARSTLTKIIEDLGVHFLQYVLKELQTTLVRGYQVHVLTFTVYTLLQGLTSKLQVGD
LDPCLPIMTEIFNHELFGALAEEKEVKQILSKVMEARRSKSYDSYEILGTFVGKDQLTKL
ILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNPDMTAESLLLLSYGLVSENLPLLTEK
EKKPAAPAPDTRLPPQSCLLLPPVPVRGGPKAAVSKRTNMHIFIESGLRLLHLSLKTSKV
KSSSEHVLEMLDPFVEVLINCLDAKDVKVITGALQCLIWVLRFPLPSIETKAEQLTKHLF
LLLKNYARLGAARGQNFHLVVNCFKCVTIVVKKVKSCQISEKQLQVLLAYAEEDIYDTTR
QATAFGLLKAILSRKLLVPEIDDIMRKVSSLAISAQNEPARVQCRQVFLKYILDYPLGDK
LRPNLEFLLAQLNYEHETGRESALEMIAYLFDTFPQGLLHDNCGMFFIPLCLMMVNDGSA
MCKRMASMAIKSLLGKVSLEKRDWLFGLVTSWFEAKKRLNRQLAALACGLFVESEGVDFE
RRLGTLLPVIEKEVDPENFKDIIEETEEKAADRLLFGFLTLISKLVKECNIIHFTKPSET
LNKIWSHIHAHLRHPHNWVWLTAAQIFGLLFASCQPEELVQKWKSKKAKKKPTEPVAVRF
LTSDLDQKMKSISLASCHQLHSKFLDETLGEQVVKNLLFIAKVLYLLEPDSGNKQRELKD
LEEQDTLGDALATEVAEDEAGADGRTELDGEEKEEPSKPATLLWLIQKLARTAKLEAAYT
PRNPLKRTCIFKFLGAVAVDLGVDRVQPYLPEVIAPLFRELNSTYSEQDPLLKNLSQEII
ELLRKLVGLESFSLAFASVQKQASEKRALRKKRKAVEFVTNPDIAAKKKLKKHKNKSEAK
KRKIEFLRPGYKAKRQKSHSLRDLAIME
NT seq
8367 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaagccgctttcccacaagacggagaacacctaccggtttcttacgtttgcc
gaaagactggggaatgtgaacattgacatcattcaccggattgatagaaccgcaagctat
gatgaggaggttgaaacctacttcttcgaggcgctgctgaagtggagagagctgaacctc
acagagcacttcgggaagttttacaaagaagtcattgacaaatgccagtcttttaaccag
ctggtctatcatcagcacgaaatagtgcagagcctgaagactcacctgcagatcaggaac
agttttgcctaccaacctctcttggatttagtagtacagttggcacgagatctgcagact
gacttctatccacacttcgaagacttcttcatgaccatcacctccatcctggagacgcag
gacacggaactgctagaatgggctttcacctcgctgtcgtacctgtacaagtacctgtgg
aggctgatggtgaaggacatgcccaagatatacagcttgtacagtgccctcttggcccac
aaaaaactacacataagaaattttgctgccgaaagttttacttttttgatgagaaaggtc
cctgataaaaatgctcttttcaatttaatgtttctcgatctcagtgagcatccagaaaaa
gtggaaggagttggacagttgctctttgaaatgtgcaaaggagtcagaaatatgtttcat
tcctgttcaggccaggcgctgaagctcattttgcaaaagctaggaccagttaccgaaaca
gaagctcagctaccatggattttagttggggaaaccctgagaaacatggccagatccact
gtaggctatatctataaggaacactttggtgtgttttttgactgtttgcaggaatccctc
ctggagctgcacaacaaaatgacggaaataaactgctgtgagaactctgaacagatcagt
cggctgctggaaaccttcctgatccttgtgaaacatggaagtggctcaaaaataacacgg
cctgctgacgtttgcagggtgctgtgtgaagcattacagacagccaatcttgccacttct
tgccggaagactctcttggacgtagtttctgctttgctcctagctgaaagtgtttccttg
ccagagaccctcatcaaagacaccatagaaaaaatatttgaaagcaaattcgagagacgt
ttgattttggatttttccgaagtcatgtttgctatgaagcagtttgaacagctgtttcta
ccaagctttctctgctacattgagacttgttttttgatggacgactctgtggtctccgac
gaagcactggccattttagccaagcttattctgaataaagctgctcctcccactgctggc
tccatggccattgagaaataccctctggatttctcacagcaggctgtggggtcctactta
aagcagaggaagactaactccaagagaagggaacagtctccagtgctagaccatctcttg
tccatagttcagttacccccaagtaacgacgccagatacctttcacagtcttgggcagcc
ctggtggtattacctcatatcaggcctcttgagaaggagaaagtgctggctctcctgtcg
tgcttcatagagtcgctcttcgtggctgttgacaaggggagctttgggaaaggatgctta
tttgttctttgtcaagctgtaaacactctgctgagtttggaggactcttctgaacttctg
cacctggttcctgtggagcacgtgaagaatttagtgttaacatttccgacggagccatct
gtgttgctgttggctgatctctattatcagaggctagcgttatgtggatgcaaagggcca
ctttctgaggaggccttaatggaattatttcccaagttacaaacaaacatttcaactggt
gtctccaagatccggctcttgacaattaggatcctaaatcattttgacatccgacttcca
gcttcagtggaggacgatgggctctcggagccgcagtcagccttcgtcatcctgcgccag
gcagagctggtgccagcaactgtgagcgactacagagagaagctgctccacttgagaaag
ctgcggcacgacgtggtgcaggatgcagtccctccgggaccactgcaggaggtaccactc
cgttatctgttcgccatgctctatgtcaacttcagtgccctctgggaccctgtgattgag
ctcataagttctcatgcccatggaatggaaaacaaacagttctggagtgtctgctatgaa
catcttgaaaaggcagcctcgcatgctgagaaagaactgcagaaggatgtgggagacgag
gagcagtccactggagatggaggggagccaacccaagaaggggatgttggctctctctac
cagcaacagttaacactgagaaccagctgtcgggagcgactagatcataccaactttcga
ttcttgctctggcgagctctggccaaatttccagagagagtagagccaaggtccagggaa
ctctccccactgttcttgaggtttatcaccaatgagtattatccagcagatctgcaggtt
gctccaacccaggatctacgcaggaaaagtagaggagcagtagctgaggaagtggaagag
gaacccgctgtgggagaagaggaagaagtggaggaagaggcagtgccgaccgatgaagca
ccccagaggagaaagacaagacgggcagcagcaaagcagttaattgctcatctgcaagtc
ttctctaagttttcaaacccacgggccttatatctagagtccaaattatatgaattgtat
cttcagttattgctacaccaagatcaaactgtgcaaaaaataaccttggattgcataatg
acctacaaacatcctcatatcctcccttacagggaaaacctgcagaggctgctagacgac
cgcagctttaaggaggagatcgtgcatttcagcctttccgaagagagcgccgtggtcaaa
gccgcccaccgggtggacttgtgtccagtcctcatgagaattttatatgggcggatgaag
aataagaccgggagtaaaacccaggggaagtctgcctcgggcacccgcatggccattgtt
ctgcgcttcctcgctggaacccaacctgaagagatccagttcttcttagatctgctgtct
gaacctgtgaagcatttcaagaatggggagtgctgctctgcagttcttcgggcggtggag
gatctggatctgtctaaggtccttcccgtgggccgtcagcatggcatcttaaacagcctg
gaggtggttctgaagaacgtcagccacctgatcagcgcgtacctgccaaagatcctgcag
atcctgctgtgtatgacggccgccatctcgcacatcctcgaccagcgggagaagatacaa
ctaaggtttattaacccactgaaaaacttaagacgtctgggaatcaagatgatcagcgat
atctttttggattgggaatcctatcagttcagagcggaagaaattgatgccgtgtttcat
ggtgcagtttggcctcaggtctgcaggcttggatctgagagtcagtattcgcctactcct
ctgctgaagctaattagtatctggagcagaaatgcaagatacttccctcttctggctaaa
cagagacccggacacccagaatgcgatgtcctgaccaacgtctttgccgttctctcagcg
aagaatctgtcggatgccacagcgagcatcgtaatggacatagtcgatgaccttctcaac
cttccagatttcgagcccacagaaacagtaccgagcttgccggtgactggctgtgtgtat
gcggaggtggctgacgacacagagcctctcactgtgggagggagattgattctgccccat
gtgcctgcaattcttcagtacctcagcaaaaccacaatcagtgcagagaaggtgaagaag
aaaaagaacagggcacaagtcagtaaggagctcggcattctttccaagatcagcaagttc
atgaaggacagagagcagagctctctcctcatcactcttctccttcccttcctcctccac
ggcaatgtcgcacaggacacagagcttgatatcctggtgacagtgcagaacttgttacag
cattgtctgaaccccaccagcttcctcaaacctctggccaaactcttctcagttattcag
aacaagttgtcaagacagttgctgtgcactgttttccagagtctgtctgattttgaaagt
ggactaaaatatgttacagacattgtaaagcttaatgcctttgataaaaggcatctcgat
gacatcaactttgacgtgcgattctcagcgttccagaccatcacctctaccgtaaaggaa
atgcagacggtggatgccgactacctagtccctgtgatgcataactgtttctataacatg
gaggtaggagacatgtctctcagtgacaatgccagcatgtgcctgacaagcatcatccag
aggctggctgctttgaacatcacagagaaagagtataaggagatcattcaccggaccctc
ctggagagactgaggaaagggttgaagagccagacagagagtgttcggcatgattatact
gtgatcctctcctgtttgattcaaactttccccaatcaactggaattcaaggacctggtg
cagctcactcatcgccacgacccggaaatggacttcttcgagaacatgaagcacattcag
gtccacagacgagcaagagccttgaagaaactggccaaacagctgctggacgggcaggtt
gtgctgtcgtccaagtcgcttcagaattacatcatgccttatgccatgacgccaatattt
gatgagaaaatgctcaagcacgagaacataaccattgccgccacggaagtcatcggcgct
gtctgcagacacctgtcgtggccggcgtacgtgtattacctgaaacacttcattcacgtc
ctgcagtcaggccaggtcaaccagaagctgggcgtcagcttgctggtgatagtgttggaa
gccttccattttgactacaaatcttttgaagagcaaatgggaaatgttaccagtgaagaa
aacacagttgagatggctgaggtactggaacatgaagacacggaattggagcctatggat
gaggaagagaaggaacaagcctgtaagagttcgtcgtcggatggcaaggagccgctggaa
gcccccgaggcagctgattctggtggaacaacagctacggaacaagaatgcatcccaaag
tctctttctttccttcctcggaataaggaagagttggaaagaacaattaaaaccatccaa
ggagccataactggggatatcctccccaggctgcacaagtgcctggcatctgcgaccaaa
agagaggaagagcacaagctggtcaagtcgaaggtcgtgaatgaggaggaagtggtccgg
gtccccctggcctttgccatggttaagctgatgcggtccctcccccaggaggtcatggag
gcaaatctgcccagtgttttgctgaaagtgtgcgtcctgctcaagaacagagcccaggaa
gtcagggacattgcacgcagtactctcaccaaaataatcgaagatctgggcgtgcacttc
ctgcagtatgttctcaaagagttacagacgacccttgtccgtgggtaccaggtccacgtg
ctcactttcactgtttacacattgctgcaaggcctcaccagcaagctgcaagttggggac
ttagacccctgtctaccaataatgactgagatttttaaccacgaattgttcggtgccctg
gcggaagagaaggaggtaaagcagattctgtccaaagtcatggaggcgcgtaggagcaag
agttacgattcttacgaaatcctgggcacgtttgtcggaaaagatcagctcacaaagctt
attctcccattaaaagagatcctgcaaaacaccacaagtttaaaacttgcccggaaagtt
cacgaaaccttacgccggattatagcaggattaattgtgaatccagacatgacagcagag
tctcttctcctgctcagctacggtctggtcagtgaaaacctgccgctgctaacagaaaag
gaaaagaagccagcagcccctgcgcctgacacacggctgccaccccagagctgcctcctg
ctccccccagttccagtccgaggtgggccaaaggctgctgtaagcaagagaaccaacatg
cacatattcatcgagtctggtcttcggctgctgcatctgagtctgaagacttccaaggtc
aagtctagtagtgagcatgtgctggaaatgttggacccttttgtggaagtcctcattaac
tgcctggacgccaaggatgtgaaggtgatcacgggcgctttgcagtgcctcatctgggtc
ttgcggttccctctgccttccatagaaacaaaagcagaacagctgaccaagcaccttttc
ctcttgctgaagaactatgcaagactgggggctgcccggggccagaacttccacttggta
gtgaattgtttcaagtgtgtgaccatcgtggtcaagaaagtcaagtcctgccagataagt
gagaaacagcttcaggttctcctggcgtatgctgaggaagacatttatgacaccacaaga
caggccactgcctttggtcttctcaaggctattttatcaagaaaattactggtcccagaa
attgatgacatcatgcggaaagtatccagcttggcaatttctgcgcagaatgagcctgcc
agggtccagtgtagacaggtttttctgaaatacattcttgactatcccctcggtgataaa
ttgagaccaaacttggaattcctgcttgctcaactgaattatgaacatgaaactggaaga
gaatctgccttggaaatgattgcctatctctttgacaccttccctcagggcctgctccat
gacaactgcgggatgttcttcatccctctttgcctgatgatggtgaacgatggctctgcc
atgtgcaagaggatggcttccatggccatcaaatccctgctcggcaaggtcagcctcgag
aagagggactggctcttcggtctggtcacctcctggtttgaagcgaaaaagcggttaaac
cgacagctagctgccctggcctgtggcttattcgtggagagtgaaggagttgatttcgag
agaaggcttggaactcttcttcctgtgattgaaaaggaggttgatcctgagaacttcaaa
gacatcatagaggagacggaggaaaaagctgcagatcgcctgctgtttggttttctcacg
ctgataagcaaactcgtcaaggaatgtaacattattcacttcaccaagccctccgagaca
ttgaataaaatctggagtcacatacacgcgcacctcagacatccgcacaactgggtgtgg
ctcacggctgcccagatttttgggttgctctttgcatcttgtcaaccggaagagctcgtt
caaaaatggaagagcaaaaaggccaaaaagaagcccacggagcctgtagcagtcaggttc
ctaacaagtgaccttgaccaaaagatgaagagtatctctctggcttcctgccatcagctg
cattccaaattcttagacgagaccctaggagaacaggttgttaagaacttactgttcata
gcaaaagtcttgtatttactggaacctgattctgggaacaagcaaagagagttgaaagac
ttggaagaacaggacacgctaggagatgctctggccacagaggtggcagaagacgaggct
ggtgcagacggaaggacggagttggacggggaagagaaggaagagcccagcaagccggcc
acgctgctgtggctgatccagaagctggcccggacagctaagctggaagctgcttatact
cccagaaaccccttaaagagaacctgcatctttaagtttcttggtgcagtagctgtggac
cttggagtagaccgggtccagccctaccttccagaggtcatcgcacctctgtttcgggaa
ctcaacagcacctactcggagcaagatcctctgctgaagaatctatcccaggaaatcata
gaattactcagaaagctggttgggctcgagagcttctcgctggcctttgcctctgtccag
aagcaggctagtgagaagagggcactccggaagaagaggaaggccgtggaatttgtaacc
aatcctgatattgctgccaagaaaaagttgaagaaacataaaaataaaagtgaagcaaag
aaaagaaagatcgagttcctgcgcccaggctataaggccaagagacagaaatcccacagc
ctgagagatttggcgatcatggagtga
DBGET
integrated database retrieval system
