Microtus oregoni (creeping vole): 121456437
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Entry
121456437 CDS
T08307
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121456437 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121456437 (Prpf8)
Spliceosome [BR:
morg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121456437 (Prpf8)
Complex C
U5 SnRNP specific factors
121456437 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
121456437
NCBI-ProteinID:
XP_041520516
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttatcgagggccgggtaacccggttcccggccctctagccccg
ctgccggactacatgtcagaggagaagctgcaggaaaaagctcgaaaatggcagcagttg
caggccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgcccccagaacacgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgccatgacaaaagggtctatttgggagccctcaagtacatgcctcatgccgttctc
aagctcctggagaacatgcccatgccttgggagcagattcgggacgtgcctgttctctat
cacatcactggcgccatttcctttgtcaatgagattccctgggttatcgagcctgtttat
atctcccagtggggatcgatgtggatcatgatgcgtcgagagaaaagagacaggaggcat
ttcaagaggatgcggttccccccatttgatgacgaggaaccgcccctggattatgctgac
aacatcttagatgttgagccactggaagccattcagctagagttggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagcctttgagagacagtaggaagtatgtt
aatggttccacttaccaacgctggcagtttacactgcctatgatgtccactctctaccga
ttggccaatcagcttctgactgacttggtggatgacaactacttctatttgtttgatctg
aaggccttctttacctctaaggcactcaatatggccattcctggaggacccaaatttgaa
cctcttgttcgagacatcaacctacaggatgaagactggaatgagttcaatgatattaat
aagatcatcatccgtcagcctattcgcactgagtacaagattgcttttccttacctgtat
aacaaccttccacaccatgtccacctgacctggtaccacactcctaacgttgtgttcatc
aagactgaggaccccgatttgcctgctttctactttgatcctctcatcaaccccatctct
cacagacactcagtcaagagccaggaaccactgcccgatgatgatgaggaatttgaactc
ccagagtttgtggagcccttcctgaaggacacacccctctatacagacaacacagccaat
ggcattgccctgctctgggcaccgcggccctttaacttacgctctggtcgtacccgccgg
gctctggacataccccttgtcaagaactggtatcgggaacactgtcctgctgggcagcct
gtgaaggtgcgagtctcctatcagaagctgcttaagtactatgtgctgaatgccctcaag
catcggcctcccaaagcccaaaagaagaggtatctcttccgctccttcaaagccaccaaa
ttctttcaatccacaaaactagactgggttgaggtagggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccggaagaacctcaactacctgcacttggactat
aacttcaacctgaagcctgtcaagacactcaccactaaggaaagaaagaaatctcgtttt
gggaatgcctttcatctatgtcgggaagtgctgcgtctaaccaagctggtcgtggatagt
catgtgcagtatcgcttgggcaatgtagatgccttccagctggcggatgggttgcagtat
atatttgcccacgtggggcagttgaccggcatgtatcggtacaagtacaaactgatgcgg
cagatccgcatgtgcaaggacttgaagcatctcatctattaccgcttcaacacgggtcct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgagtctggctgtttttt
atgcgtggaattacccctttgctagagcgctggctgggcaacctcctggcccggcagttt
gaaggtcgtcactcaaagggggtggcaaagacagtaacgaagcagcgagtggagtcccat
ttcgacctggagctcagggcagctgtgatgcatgatatcctggacatgatgcctgagggc
atcaaacagaacaaggcccgaacaattctgcagcacctcagtgaggcctggcgctgctgg
aaggccaacattccctggaaggtcccagggttgccaacacctatagagaatatgattctt
cggtatgttaaggccaaggctgattggtggaccaatactgcccactacaaccgtgaacga
atccgccgtggggccactgtagataagactgtttgcaaaaagaacctgggccgcctcacc
cgcctgtacttgaaggcagaacaggagcggcagcacaattacctgaaggatgggccttac
attacagcagaagaagcggtggcagtgtatactaccaccgtgcattggttggaaagccgc
agattctctcccatcccattccctccgctctcctacaagcatgatactaagttgctcatc
ttggctctggagcgcctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaggagctgggtctgatcgagcaagcctacgacaacccccatgaggctttgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagtttatggat
ctctatagccacctggtgccagtgtatgatgtggaacccctggagaaaataactgatgct
tacctggaccagtatctgtggtatgaagccgataaacgccgtcttttcccgccctggatc
aagcctgccgacacggaaccacctccactgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagaccagtgagggcgagtgcaatgtcatgttggagtcccgc
tttgagaagatgtatgaaaagattgacttgaccctgcttaacaggctgctgcggctcatt
gtggaccacaacatagctgactacatgacagccaagaacaacgtcgtcattaactataag
gacatgaaccatacaaattcatacgggatcatcagaggcctgcagtttgcctcgttcatt
gtgcagtactatggcttggtgatggatttgcttgtattgggattgcaccgggccagtgag
atggctgggcctcctcagatgccaaatgactttctcagtttccaggacatagccactgaa
gctgcgcacccaatccgactcttctgtagatacattgatcgcattcatattttcttcagg
ttcacagcagatgaggctcgggatctgatccagcgttacctgacagagcatccagacccc
aacaatgaaaacattgttggctacaataacaagaaatgctggccccgggatgcccgcatg
cgcctcatgaaacatgatgtcaacttgggtcgggcagtgttctgggacattaaaaaccgg
ctgccacgatcagtgactacagtgcagtgggagaacagctttgtgtctgtgtacagtaaa
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaagtgt
cgtaccagctatgaagagttcacccacaaggacggggtctggaacctgcagaatgaggtt
accaaggagaggacagcgcagtgtttcctgcgtgtggatgatgagtcgatgcaacgcttc
cataaccgagtgcgtcagattctaatggcctctggctccaccacctttaccaagattgtg
aataagtggaatacagctctcatcggccttatgacatattttcgagaggctgtggtgaac
acgcaggaactcctagacttattggtaaagtgtgaaaacaagatccagacacgtatcaag
attggattgaactccaagatgccaagtcggttcccccctgttgtgttctacacccctaag
gagctgggtgggcttggcatgctctccatgggccacgtgctcatccctcagtctgatctc
aggtggtctaagcaaacagatgtgggtatcacacacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaacttgtaccgctacatacaaccctgggagagtgagttcatt
gactctcagcgcgtctgggctgagtatgcactcaagagacaggaggctattgctcagaac
agacggctgactttagaagatttagaagattcatgggatcgaggcattccacggatcaat
accctcttccagaaggaccggcacacattggcttatgataagggctggcgtgtccgaact
gactttaagcagtaccaggttctgaagcagaaccccttctggtggacacaccagcggcat
gacggcaagctctggaacctcaacaactaccgcacagacatgatccaggccctgggtggt
gtggagggcatcctggaacacactctcttcaagggcacgtacttccctacctgggaaggt
ctgttctgggagaaagccagtggctttgaggagtccatgaagtggaagaagctgaccaat
gctcagcgatctggattaaaccagattcctaatcgtagattcaccctctggtggtcccca
acaatcaatcgagccaatgtatatgtaggctttcaggtgcagctagacttgacaggaatc
ttcatgcatggcaagatccccacactgaagatctccctcatccagatattccgagctcac
ctgtggcagaagatccatgaaagcatcgtgatggacttatgtcaggtctttgaccaggaa
ttggatgcactggaaatcgagacagtacagaaagagacaatccatccccgaaagtcctat
aagatgaactcttcctgtgcggacatcctactcttcgcttcctataagtggaatgtctcc
cggccctcgctgctggcagactccaaggatgtgatggacagtacaactacacagaagtat
tggattgacatccagctacgttggggcgactatgattcccacgatattgagcgctatgcc
cgggccaaattcctggattataccacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccattgacctggcctacaatctacacagtgcctatggaaactggtttcca
ggcagcaagcctctgatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgagcggatacgcaaaggactgcagctgtattcatcagagcccactgag
ccttatctgtcctcccagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgacaccaatgtctatagagtgactatccacaagacctttgaggggaacttgacaacc
aaacctatcaatggggccatcttcatctttaacccacgcacggggcagcttttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtttgggtcagttggccaagtggaag
acagctgaggaagtggctgccctgatccgatctctgcctgtggaggaacagcctaaacag
atcattgtcaccaggaagggcatgctggatccattggaggtacacttgctggacttcccc
aacattgtgatcaaaggatcggagctccagctccccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccacagaaccccagatggttcttttcaacctctac
gatgactggctcaaaactatctcatcttacacggctttctctcgtctcatcctgattctg
cgtgctttgcacgtgaacaacgatcgggcaaaggtgatcctgaagccagacaaaaccact
atcacagagccacaccacatctggcccacgctgactgatgaggagtggatcaaggtggag
gtgcagctcaaggacctgatcttggcggactatggcaagaagaacaacgtgaacgtggca
tccctgacacaatcagaaatccgagacatcatcctaggaatggagatctcagctccatca
cagcagcgccagcagatagctgagattgagaagcagaccaaggaacagtcacagctcact
gccacgcagactcgaactgtcaacaaacatggcgatgagattatcacctccaccactagc
aactatgaaacccagaccttctcgtcaaagactgaatggagggtcagggccatctctgct
gccaacctgcatctacggaccaatcacatttatgtttcatctgatgacatcaaggagact
gggtatacttacattcttcccaagaatgtgcttaagaagttcatctgcatatctgatctc
cgtgcccaaattgcaggatacctatatggggtgagtcctccagataaccctcaggtgaag
gagatccgctgcattgtgatggtgccgcagtggggcactcaccagactgtgcacctgccc
agccagctgccccagcacgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtctccccagttatcaccccaagatgtcaccactcatgccaagatcatg
gctgacaacccatcctgggatggcgagaagacaattatcatcacctgtagcttcacccca
ggctcctgcacactgacagcctacaagctgacccccagtggctatgagtggggccggcag
aacactgacaaaggcaacaatcccaaaggctacctgccctcgcactacgagagggtgcag
atgctcctgtcagaccgattcctcggcttctttatggttcctgcccagtcctcctggaac
tacaactttatgggtgttcggcatgatcccaacatgaaatatgagctgcagctggcaaac
cccaaggaattctaccatgaggtccataggccctcccacttcctcaactttgccctcctg
caggagggtgaggtctattctgcagacagagaggatctctacgcctag
DBGET
integrated database retrieval system
