Microtus oregoni (creeping vole): 121456447
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Entry
121456447 CDS
T08307
Symbol
Fdft1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg00100
Steroid biosynthesis
morg01100
Metabolic pathways
Module
morg_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121456447 (Fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
morg01006
]
121456447 (Fdft1)
Enzymes [BR:
morg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121456447 (Fdft1)
Prenyltransferases [BR:
morg01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121456447 (Fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
Motif
Other DBs
NCBI-GeneID:
121456447
NCBI-ProteinID:
XP_041520532
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MEFVKCLGHPEEFYNLLRFRMGGQRKFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRHAVCVFYLVLRALDTVEDDMTISVEKKIPMLRNFHTFLYEPEWRFMESKEKHRQ
VLEDFPTISLEFRNLAEKYQTVIADICQKMGCGMAEFVDKHVTSKQDWDKYCHYVAGLVG
IGLSRLFSASEFEDPLVGEDTECANSMGLFLQKTNIIRDYLEDQQEGREFWPREVWGRYV
KKLEDFAKPENIDVAVQCLNELITNTLHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIQQYIEEIYHRIPNSDPSSSKTK
QVISTIRTQSLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYMQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgtctcggccacccggaggagttctacaacctgctgcgattccgc
atgggaggccagcggaagttcataccaaagatggaccaggactcgctcagcagcagcttg
aagacctgctacaagtatctgaatcagaccagtcgcagcttcgccgcggttatccaggcg
ctggatggggaaatgcgccacgcagtgtgtgtgttttatctggttctccgcgctctggac
accgtggaagatgacatgaccatcagtgtggagaagaagatcccgatgctgcgcaacttt
cacactttcctctatgaaccagagtggcgcttcatggagagcaaggagaagcaccgccaa
gtgctggaggacttccccacgatctccctggagtttagaaatttggcggagaaataccaa
acagtgattgctgacatctgccaaaaaatgggatgtgggatggcagaatttgtggacaag
catgtgacctccaaacaggactgggacaagtattgtcactacgttgctgggctggtagga
attggcctttctcgtctgttctcggcctcagagtttgaagaccccttagttggtgaagac
acagaatgtgccaactcaatgggtctcttcctgcagaaaacaaatatcattcgtgattac
ctggaagaccaacaagaaggaagagagttttggcctcgagaggtgtggggcagatacgtt
aagaagctggaagactttgctaagccagaaaacatagatgtggccgtgcagtgcttaaat
gaactcataaccaacaccctgcaccatatccccgacgtcatcacctacctgtcaaggctc
cggaaccaaagtgtgtttaacttctgtgctattccacaggtaatggccatcgctacactg
gctgcctgttacaacaatcagcaggttttcaaaggggtagtgaagattcggaaggggcaa
gcagttaccctcatgatggatgctaccaacatgccagccgtcaaagctatcatacaacag
tatatagaagagatttatcaccggatccccaactcagacccatcttccagcaaaaccaaa
caggtcatctccaccatcaggacacagagccttcccaactgtcagctcatctcccgaagc
cactactcccccatttacctgtcgtttgtcatgctcttggctgccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaagactatatgcagacaggagaacactga
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