Microtus oregoni (creeping vole): 121456678
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Entry
121456678 CDS
T08307
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04082
Neuroactive ligand signaling
morg04721
Synaptic vesicle cycle
morg04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121456678 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
121456678 (Slc6a4)
04721 Synaptic vesicle cycle
121456678 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
morg02000
]
121456678 (Slc6a4)
Transporters [BR:
morg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121456678 (Slc6a4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
121456678
NCBI-ProteinID:
XP_041520993
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All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
METTPLNSQKVLSACKDREDCQGNGVLQKGVPTPGDRPEPGQMSNGHSADPSTSADEATH
SIPTATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLPY
TIMAIFGGIPLFYMELALGQYHRNGCISVWRKICPIFKGIGYAICIIAFYIASYYNTIIA
WALYYLISSFTDQLPWTSCKNSWNTGNCTDYFSQDNVTWTLHSTSPAEEFYLRHVLQIHQ
SKGLQDLGTISWQLALCILLIFTVIYFSIWKGVKSSGKVVWVTATFPYIVLSVLLVRGAT
LPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFSNNCYQDA
LVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEEVSEVAKDAGPSLLFITYAEAIANMPAAT
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVIICVLGSLLTL
TSGGAYVVTLLEEYATGPAVLTVALIEAIAVSWFYGISQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFILCSFLMSPPQLRLFQYNYPHWSIVLGYCLGTSSIICIPTYIIYRLVSTP
GTLKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagtcctgtcagcatgcaaagacagagaggac
tgccaaggaaacggtgttctccaaaagggtgtccccaccccgggggacaggccagagcct
ggccaaatgtccaatgggcactctgcagatcccagcaccagtgcagatgaagctacacac
tctatcccaacagccaccaccaccctggtggcggagattcgccaaggggaacgggagacc
tggggcaagaagatggattttctcctgtctgtcatcggctatgctgtagacctgggcaac
atctggcgttttccctacatatgctaccagaatggcggaggggccttcctccttccttac
accatcatggccatctttggggggatcccactcttttacatggagcttgcgctgggccag
taccaccgaaacgggtgcatttctgtatggaggaaaatctgccccattttcaaagggatt
ggctatgccatctgcatcatagccttctatatcgcctcctactacaacaccatcatcgcc
tgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgcaag
aactcctggaacactggcaactgcaccgactacttctcccaggacaatgtcacctggaca
ctccattccacgtcacctgctgaggagttttacctgcgccacgtcctgcagatccaccag
tctaagggcctccaggacctggggaccatcagctggcagcttgctctctgcatcctactc
atcttcactgttatctactttagcatctggaaaggagtcaaatcatctggcaaggtggtg
tgggtgacagccaccttcccttacatcgtcctgtctgtcctgctggtgaggggggccacc
cttcctggagcctggagaggggtcgtcttctacctgaaacccaactggcagaaactcttg
gagacgggggtatgggtggatgctgctgctcaaatcttcttctctctcggcccgggcttt
ggggttctcctggcttttgctagctacaacaagttcagtaacaactgctaccaagacgcc
ctggtgaccagtgtggtaaactgcatgacaagcttcgtctctggttttgtcatcttcacg
gtgcttggctacatggccgaaatgaggaatgaagaggtgtccgaggtggccaaagatgca
ggccccagcctcctcttcatcacgtacgcggaggccatagccaacatgccagcagccacc
ttcttcgccatcatcttcttcctcatgctgatcacactgggtttggacagcacgtttgca
ggcctggaaggcgtgataacagcggtgctggatgagtttccacacatctgggccaagcgc
cgggagtggtttgtgctcatcgtggtcattatttgtgtcttgggatccctgctcacgcta
acttctggaggggcatacgtggtgaccctgttggaggagtacgccaccgggcccgccgtg
ctcactgtggcactcatagaagccattgccgtgtcttggttctacggtatcagtcagttc
tgcagcgacgtgaaggaaatgcttggcttcagcccgggatggttctggaggatctgctgg
gtagccatcagtcctctgtttctcctgttcatcctttgcagctttttgatgagtccaccc
cagctgcggcttttccaatacaattaccctcattggagcatcgtcttgggctactgctta
gggacgtcttctattatctgcatccctacgtacatcatttatcggctggtcagcactccg
gggacgctgaaggagcgcattattaaaagtatcactcctgagacaccaacggaaattccc
tgtggggacatccgcttgaatgctgtgtaa
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