Microtus oregoni (creeping vole): 121456724
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Entry
121456724 CDS
T08307
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03013
Nucleocytoplasmic transport
morg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121456724
03015 mRNA surveillance pathway
121456724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121456724
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121456724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121456724
NCBI-ProteinID:
XP_041521073
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSAGGGGSGSLPSQRGGRGGGLHL
RRVESGGAKSAEQSECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAND
AADSSAKEKGEEKPDNKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRVRKPRFGSPPQRDPNWIGDRSNKSHRHQGPGGALPPRTFINRNAA
GTGRMSASRNYSRSGGFKEGRTSFRPVEVGGQHGGRSGETHKHEANYRSRRLEQTPMRDP
SPEPDAPLLGSPEKEETASETPAAVPDTVPPAPDRPIEKKSYSRARRTRTKVGDAVKASE
EVPPPSEGLTSATTIPETTPPPAAKTGNWETPVDSTTGGLEQDVAQLNIAEQNWSPGQPS
FLQPRELRGMPNHIHMGAGPPPPFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgtcggcagcgcgcttcccaggacaccgaggacgaagagtctggtgct
tcgggttccgacagcggctctccggcgcggggcggcggcagctgcagcgggagcgccgga
ggcggcggtagtggctcgctgccttctcagcgcggcggccgcggcgggggcctgcatctg
cggcgggtggagagcgggggcgccaagagcgcagagcagtcggagtgtgagagtgaagat
ggcatggaaggcgatgctgtcctttccgattatgaaagtgcagaagattcagaaggtgaa
gaaggagaatacagtgaagaggagaactccaaggtggagctgaaatcagaagcaaatgat
gctgctgattcctcagcaaaagagaagggagaagaaaagcctgataataaaggcactgtg
actggagagaggcaaagtggggatggacaggagagcacagagcctgtagagaacaaagtg
ggtaaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcctatata
cccaggaaagggctcttctttgagcatgatcttcgaggacagactcaggaagaagaagtc
cgacccaagggacgtcagcgaaagctatggaaggatgagggccgctgggagcatgataag
ttccgtgaagatgaacaggccccaaagtcccgacaggagctcattgctctttatggctat
gatattcgatccgctcacaatcctgatgacatcaaaccccgaagagtccgaaaacctcga
tttggaagtcccccacaaagagatccaaactggattggtgatcgatcaaacaagtcccat
cgccaccagggtcctgggggcgccctaccaccaagaacatttattaacaggaatgcagca
ggtactggccgcatgtctgcatccaggaattattcccgatctgggggcttcaaggaaggt
cgtactagttttaggcctgtggaggttggtgggcagcatggtggccggtctggtgagact
cataagcatgaagctaattaccggtcgcggcgtctggagcagactcctatgagggatcca
tctccagaaccagatgctccattgcttggcagtcctgagaaagaagagacggcctcggag
acaccagctgctgttcctgacactgtaccaccagctcctgacaggcccattgagaagaaa
tcctattcccgggcaagaaggacccggaccaaagttggggatgcagtcaaagcttctgag
gaggttcctcctccatctgaagggctcacttcagcaaccacaatcccagaaacaactcct
cctccagctgctaagactgggaactgggagactccggtagattctaccacaggtggactg
gagcaagacgtggcacagctaaatatagcagaacaaaactggagtccaggacagccttca
ttcctgcaaccacgggagcttcgaggtatgcccaaccacatccatatgggagcaggacct
ccacctccatttaaccggatggaagaaatgggtgtccagggtggtcgagctaaacgttat
tcgtcccagcggcagagacctgtgccagagccccctgctcctcctgtgcatatcagcatc
atggagggccattactatgatccattgcagttccagggaccaatttatacccatggtgac
agccctgccccactgcctccacagggcatgattgtacagccagaaatgcaccttcctcac
ccaggtttacatccccatcagtcaccagcacctctgcccaatccgggtctttacccgcca
ccagtgtccatgtctccaggacaacctccaccccagcagttgcttgctcctacttacttc
tctgctccaggtgtcatgaattttggtaaccccagttacccttatgctccaggagcatta
cctcctcctcctcctcctcatctgtatcctaacacacaggctccatcacaggtatatgga
ggagtgacttactataaccctgcccagcagcaggtgcagcccaaaccctccccaccccgg
aggactccccagccagtctccatcaagccccctccacctgaggttgtaagcaggggttcc
agttaa
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