KEGG   Microtus oregoni (creeping vole): 121456724
Entry
121456724         CDS       T08307                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03013  Nucleocytoplasmic transport
morg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121456724
   03015 mRNA surveillance pathway
    121456724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:morg03019]
    121456724
Messenger RNA biogenesis [BR:morg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121456724
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 121456724
NCBI-ProteinID: XP_041521073
LinkDB
Position
Unknown
AA seq 701 aa
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSAGGGGSGSLPSQRGGRGGGLHL
RRVESGGAKSAEQSECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAND
AADSSAKEKGEEKPDNKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRVRKPRFGSPPQRDPNWIGDRSNKSHRHQGPGGALPPRTFINRNAA
GTGRMSASRNYSRSGGFKEGRTSFRPVEVGGQHGGRSGETHKHEANYRSRRLEQTPMRDP
SPEPDAPLLGSPEKEETASETPAAVPDTVPPAPDRPIEKKSYSRARRTRTKVGDAVKASE
EVPPPSEGLTSATTIPETTPPPAAKTGNWETPVDSTTGGLEQDVAQLNIAEQNWSPGQPS
FLQPRELRGMPNHIHMGAGPPPPFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcggaccggcgtcggcagcgcgcttcccaggacaccgaggacgaagagtctggtgct
tcgggttccgacagcggctctccggcgcggggcggcggcagctgcagcgggagcgccgga
ggcggcggtagtggctcgctgccttctcagcgcggcggccgcggcgggggcctgcatctg
cggcgggtggagagcgggggcgccaagagcgcagagcagtcggagtgtgagagtgaagat
ggcatggaaggcgatgctgtcctttccgattatgaaagtgcagaagattcagaaggtgaa
gaaggagaatacagtgaagaggagaactccaaggtggagctgaaatcagaagcaaatgat
gctgctgattcctcagcaaaagagaagggagaagaaaagcctgataataaaggcactgtg
actggagagaggcaaagtggggatggacaggagagcacagagcctgtagagaacaaagtg
ggtaaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcctatata
cccaggaaagggctcttctttgagcatgatcttcgaggacagactcaggaagaagaagtc
cgacccaagggacgtcagcgaaagctatggaaggatgagggccgctgggagcatgataag
ttccgtgaagatgaacaggccccaaagtcccgacaggagctcattgctctttatggctat
gatattcgatccgctcacaatcctgatgacatcaaaccccgaagagtccgaaaacctcga
tttggaagtcccccacaaagagatccaaactggattggtgatcgatcaaacaagtcccat
cgccaccagggtcctgggggcgccctaccaccaagaacatttattaacaggaatgcagca
ggtactggccgcatgtctgcatccaggaattattcccgatctgggggcttcaaggaaggt
cgtactagttttaggcctgtggaggttggtgggcagcatggtggccggtctggtgagact
cataagcatgaagctaattaccggtcgcggcgtctggagcagactcctatgagggatcca
tctccagaaccagatgctccattgcttggcagtcctgagaaagaagagacggcctcggag
acaccagctgctgttcctgacactgtaccaccagctcctgacaggcccattgagaagaaa
tcctattcccgggcaagaaggacccggaccaaagttggggatgcagtcaaagcttctgag
gaggttcctcctccatctgaagggctcacttcagcaaccacaatcccagaaacaactcct
cctccagctgctaagactgggaactgggagactccggtagattctaccacaggtggactg
gagcaagacgtggcacagctaaatatagcagaacaaaactggagtccaggacagccttca
ttcctgcaaccacgggagcttcgaggtatgcccaaccacatccatatgggagcaggacct
ccacctccatttaaccggatggaagaaatgggtgtccagggtggtcgagctaaacgttat
tcgtcccagcggcagagacctgtgccagagccccctgctcctcctgtgcatatcagcatc
atggagggccattactatgatccattgcagttccagggaccaatttatacccatggtgac
agccctgccccactgcctccacagggcatgattgtacagccagaaatgcaccttcctcac
ccaggtttacatccccatcagtcaccagcacctctgcccaatccgggtctttacccgcca
ccagtgtccatgtctccaggacaacctccaccccagcagttgcttgctcctacttacttc
tctgctccaggtgtcatgaattttggtaaccccagttacccttatgctccaggagcatta
cctcctcctcctcctcctcatctgtatcctaacacacaggctccatcacaggtatatgga
ggagtgacttactataaccctgcccagcagcaggtgcagcccaaaccctccccaccccgg
aggactccccagccagtctccatcaagccccctccacctgaggttgtaagcaggggttcc
agttaa

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