Microtus oregoni (creeping vole): 121456975
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Entry
121456975 CDS
T08307
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03440
Homologous recombination
morg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121456975 (Brip1)
03460 Fanconi anemia pathway
121456975 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
morg03400
]
121456975 (Brip1)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121456975 (Brip1)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121456975 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
121456975 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF1866
Motif
Other DBs
NCBI-GeneID:
121456975
NCBI-ProteinID:
XP_041521496
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MSSVSSEYTIGGVKILFPCKAYPAQLAMMNSIVRGLNSEQHCLLESPTGSGKSLALLCSA
LAWQQSFTGKPVDGGLNKKPEMPSSCGCACHSKSFPYSGTDIGTSPHFHSPSTPPERNGP
SSPCQDSPEKTTLAAKLSAKKQASTHRGEDDDFQIEKKRIRPLETAQQMRKRHCLEKDVQ
HLDARAAPEKRVKPGSPVGKTSSSFQNLNGQSCKCCCSTKQGNSEDSADTIKKDHGGQSK
RPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELL
DGKHGKSCYFYHGVHKIGNQQTLQFHQGMSKAWDIEELVGLGRKLKACPYYTARELVDDA
DIVFCPYNYLLDAQIRESMDIKLKEQVVILDEAHNIEECARESASYSVTEVQLRFARDEL
DSLVNSNIRKKNHEPLRDVCYNLINWLETNSEHLVERDYESSCKIWSGNEMLLNLYKMGI
TSATFPILQRHFSTVLQKEEKVTSVHGKEEAVDIPIISASTQIMLKGLFMVLDYLLRENS
RFAGDYKIAIQQTYSWTNQIAVFDKNGVLALPKNKKHSRQKIGVNVLNFWCLNPAVAFSD
INNKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWVGTVGSGPKGRNLCA
TFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWISTGLWHNLESVKT
VIAEPQRGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITV
GIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGAL
ILVDDRFNSNRDRYTSGLSKWVRQQIQHHSTFASALESLTEFSKRHQKVTNRSKKDKECI
KDRESTVKAACLEDSSLTRVSKASPLSPENSRKEEAKVCVQELQHPRMAAKNPSVPSHGV
SRRKKSDPILRKESVQTVKTEKNVISRSSSPTFGKQAEAISWPVFNSLRRHFASKGKNCT
SARVSSESHASGSSTFKTEETEDKTALPPTDKYVSSSETANASLAPCSQSEVMTPSMKVG
ATPAKNHSKQPLCSEKDLHPDSELPPVSEEPGRSGSSKAIETEAEDDCLCYTPELFDPVD
TDEEKTEVDETDRSSNNSAEDLFETVTGCSQK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtgtcatctgaatacaccattggtggggtgaagattctctttccttgcaaa
gcttatcccgcacagcttgctatgatgaattctatcgtcagaggactgaacagtgagcag
cactgtttgttggagagtcccacaggaagtggaaaaagcttagccttactttgttctgcg
ttagcatggcaacagtcttttactggaaagccagtggatgggggcttgaacaaaaagcct
gagatgccgtcgtcatgtggttgtgcatgccactcgaagagttttccttacagtggcacg
gacataggcacttcacctcacttccatagtccaagcacaccgccagagagaaacggcccc
tcatcaccctgccaagactctcctgaaaaaactactctggctgcaaagttatctgccaag
aaacaggcatccacgcaccgaggtgaagatgatgattttcaaatagagaagaaaagaatc
cgccccttagagaccgcacagcagatgagaaaacgtcattgtttggaaaaggacgtccag
catttggatgcacgagcagccccggaaaagagagtaaaacccggatctcctgtaggaaag
acaagctcctctttccaaaatctcaatggccagagttgtaagtgctgctgttctactaaa
caaggaaacagtgaagactctgcagatactattaagaaagatcacgggggacaatccaag
agacccaaaatttattttgggacacgcacacacaagcagattgctcagattactagagag
ctccgaaagacagcttactcaggagtcccaatgactattctttccagcagggaccatact
tgtgttcaccctgaagtggtgggtaacttcaacagaaatgagaagtgcatggaactgctg
gatggaaaacacgggaagtcctgctatttttaccatggtgtccataaaattggtaaccag
cagacattgcagtttcatcaggggatgtccaaagcctgggacatagaagagcttgtcggc
ctcgggaggaaattgaaggcatgtccctactacacagctcgggagctggtagatgatgct
gacatagtattttgtccctacaactacctcttggacgctcaaataagggaaagcatggat
ataaagctgaaagagcaagttgtcattttagatgaagctcataacattgaagagtgtgct
cgggagtcagcaagctacagtgtaacagaggttcagcttcggtttgcccgggatgagctg
gatagtttggtcaacagtaacataaggaagaaaaaccacgagcccctgcgagatgtgtgt
tataacctcattaattggttagaaacaaattctgagcatcttgtggaaagggactatgag
tcgtcttgtaaaatatggagtggaaatgaaatgctcttaaatttgtacaaaatgggcatc
accagtgccacttttcccattttgcagagacatttttcaactgttcttcaaaaagaagaa
aaagtgacatcggtccacggtaaagaagaagcagtagacatacctattattagtgcttca
acccagataatgctcaaagggctcttcatggtgctggactacctcttgagagaaaatagc
agatttgcaggtgattataaaattgctattcagcaaacttactcctggacaaatcagatt
gctgtttttgataaaaatggagtcttggctctaccaaaaaataagaaacattcacgacag
aaaattggagttaatgtgctaaacttttggtgcttaaatccagctgtggccttttcagat
attaataacaaagtacgaaccattgtcctaacatcaggaacactgtcacctctaaaatca
ttttcatccgagcttggtgttacatttaacatccagctagaggctaaccatgtcatcagt
aactcacaggtttgggttggtactgttggctcaggccctaagggccggaatctctgtgct
accttccagcataccgaaacatttgagttccaggacgaagtgggaatgcttttgttatct
gtgtgtcagactgtgagccaaggaattttgtgctttttgccatcttacaagctattagag
aagttaagagaacgttggatttccactggcttatggcataatttggagtcagtgaagaca
gtcattgcagaaccccaaagaggagaaaaaactgattttgatgaattgctgcaggtgtac
tatgatgccatcaagttcaaaggagaaaaagatggagcccttctcattgcggtttgtcgc
ggcaaagtgagcgagggtctggatttctcagatgataatgcccgtgccgtcataacagta
ggaattcctttcccaaatgtgaaagatcttcaggttgaactaaagcgacaatataatgac
caccactcaaaactgagaggccttttgcctggccgtcagtggtatgaaattcaagcatac
agagccttaaaccaggctcttggcaggtgtattcgacacaaaaatgattggggagctctt
attctagtggatgatcgttttaatagcaatcgagatcgctatacatctggactctctaaa
tgggtgaggcagcagatccagcaccactcaacctttgcaagtgccctggagtccctgact
gagttttctaaaaggcaccagaaagttactaaccgatccaaaaaagacaaagaatgtata
aaagacagggagtctaccgtgaaagcggcctgtttggaggatagctctctgacaagagtg
tcaaaagcaagtcctctatcaccagaaaattctaggaaagaagaagcgaaagtgtgtgtc
caggagctgcaacatccccggatggctgctaaaaacccttcagtgccgagtcacggcgtc
tccagaaggaagaaaagtgatccaatactaagaaaagagtctgttcaaacagtgaaaaca
gagaaaaatgtcatttccagatcctcaagcccaactttcgggaagcaagcagaggcaatc
agctggcctgtctttaattctctgagacggcacttcgctagtaaaggaaagaattgcacg
tctgcacgtgtgtcatcagagagccatgcctctggttcttccaccttcaaaacagaagaa
acagaagataaaactgctttgccacccacggataaatatgtgtcctccagcgaaacagca
aacgcatcattagcaccttgctctcagtcagaagtcatgactccgtcaatgaaggttggt
gctactcccgccaagaaccattccaaacaaccgctctgctcagagaaagacctacatcca
gatagtgaattgcctccagtaagtgaagagcccgggcgttccggctcaagtaaagctatt
gaaacagaagcagaagacgactgtctgtgttacacacctgaactttttgatcctgttgat
actgatgaagaaaagactgaagtagatgaaaccgatagatccagtaataattcagcagaa
gacctttttgaaactgtaactggctgcagccagaaatga
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integrated database retrieval system
