Microtus oregoni (creeping vole): 121457004
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Entry
121457004 CDS
T08307
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03030
DNA replication
morg03420
Nucleotide excision repair
morg03430
Mismatch repair
morg03440
Homologous recombination
morg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121457004 (Rpa1)
03420 Nucleotide excision repair
121457004 (Rpa1)
03430 Mismatch repair
121457004 (Rpa1)
03440 Homologous recombination
121457004 (Rpa1)
03460 Fanconi anemia pathway
121457004 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
morg03000
]
121457004 (Rpa1)
03032 DNA replication proteins [BR:
morg03032
]
121457004 (Rpa1)
03400 DNA repair and recombination proteins [BR:
morg03400
]
121457004 (Rpa1)
Transcription factors [BR:
morg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121457004 (Rpa1)
DNA replication proteins [BR:
morg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121457004 (Rpa1)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121457004 (Rpa1)
MMR (mismatch excision repair)
121457004 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
121457004 (Rpa1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
DUF8448
IBR
Ubiquitin_At1g33420
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
121457004
NCBI-ProteinID:
XP_041521548
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MAGHLSEGAIATIMQKGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEGQLASNCICQVNRFIVNTLKDGRRVVILMDVEVVKSAEAVGVKIGNPVPYNE
GHGQQQVVPSPASATTPPASKPQPQSGSLGMGSTVAKAYGASKPFGKPGGTGLLQPSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDETGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLLCEDDRNLPTVQF
DFTGIGDLESKAKDSLVDIIGICKSYEDSTKITVKSNNREVAKRNIYLMDVSGKVVTTTL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLRSGGTGGSNTNWKTLYEAKSENLGQGDKADYFSTVATVMFLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANVADFQENQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
DYAKRLIMNIKRNI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctgagcgagggggccattgcgaccataatgcaaaagggagatacatcc
ataaagcctgtccttcaagtcattaacatccgtcccattactacagggaatagtccaccc
cggtatcgactgcttatgagtgatggattgaacacgctctcctcattcatgttggccaca
cagctgaaccctcttgtcgaggaggggcagctggccagcaactgtatctgccaggtcaac
cgattcatcgttaacaccctgaaagacggaaggagagtagttattttgatggacgtggaa
gttgtgaagtcagctgaagcagttggagtaaaaattgggaacccagtgccctataatgaa
ggccatgggcagcagcaagttgttccttccccagcctcagcaaccacaccaccagccagc
aagccccagccacaaagtggaagcttgggaatgggttccactgtggctaaggcttatggt
gcctcaaagccatttggaaaacctggtggaactggcctgctgcagccttcaggaggaaca
cagtccaaagtggtacccatcgccagcctcaccccttaccaatccaagtggactatttgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
ctcttctctatagaacttgtggatgaaactggtgaaatcagagcaactgctttcaatgaa
caggtggacaagttctttccccttattgaagtgaacaaggtgtattatttctcaaaaggc
actctgaagatcgctaacaagcaattctcggctgttaaaaatgactatgagatgaccttc
aataatgagacttcggtccttctctgtgaagatgaccgtaacttacccacagttcagttt
gatttcacagggatcggtgacctagagagcaaggctaaagactcacttgtagacataatc
gggatctgcaagagctacgaagattcaactaaaatcacagtgaagtctaacaacagagaa
gtggctaagagaaatatctatttgatggacgtgtcagggaaagtggtgactacaactctg
tggggagaagacgctgacaagtttgatggttctagacagcctgtgatggctatcaaagga
gcccgggtttctgactttggcggacgaagcctctctgtcctttcatctagcactgtcatt
atgaatcctgacatcccagaggcctataagcttcgtggatggttcgactccgaaggacaa
gccttagatggtgtttccatctctgacctcaggagcggaggcactggagggagcaacaca
aactggaaaactttgtatgaggctaaatctgagaacctgggccagggtgacaaggctgac
tatttcagcaccgtggcaacggtgatgtttcttcgcaaagagaactgtatgtaccaggcc
tgcccaacccaggactgcaataagaaagtgattgaccagcagaatgggttgtaccgctgt
gagaagtgtgaccgggaatttcccaacttcaaataccgcatgatcttatcggcaaatgtt
gcggattttcaagagaaccagtgggtgacgtgtttccaggagtctgcggaggctatcctt
ggacagaatactgcgtaccttggggagctgaaagaaaagaacgagcaggcgtttgaagag
gtttttcagaatgccaacttccgatcatttacattcagaatcagggtcaagctggagacc
tacaatgacgaatctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gactatgccaagaggctgatcatgaacatcaagaggaacatatga
DBGET
integrated database retrieval system
