Microtus oregoni (creeping vole): 121457032
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Entry
121457032 CDS
T08307
Symbol
Rad50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03440
Homologous recombination
morg03450
Non-homologous end-joining
morg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121457032 (Rad50)
03450 Non-homologous end-joining
121457032 (Rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121457032 (Rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
morg03032
]
121457032 (Rad50)
03400 DNA repair and recombination proteins [BR:
morg03400
]
121457032 (Rad50)
DNA replication proteins [BR:
morg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
121457032 (Rad50)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
121457032 (Rad50)
BRCA1-C complex
121457032 (Rad50)
NHEJ (non-homologous end-joining)
MRX complex
121457032 (Rad50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
DUF2703
ABC_tran
SBP_bac_3
AAA_29
Motif
Other DBs
NCBI-GeneID:
121457032
NCBI-ProteinID:
XP_041521594
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDLNGEVVAVQRSMLCSQKSKKTEFKTLEGVITR
RKHGENVSLSSKCAEIDREMISCLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLRSSQEI
VKSYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLSQEREELLVEQGRLQQQADRH
QEHIRARDSLIQSLATHLELDGFEHGPFSERQITNFHELVREKQEREAKTASQLLNDLTE
KETLKQKQIDEIRDKKSGLGRVIELKTELLTKKQSELRNVKNELQRLEGSSDRILELDQE
LTKAERELSKTEKNCNVEALKAEVISLQNEKADLDRSLRKLDQEMEQLNHHTTTLTQMEM
LTKNKTDKDEQIRKIKSRHSSELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLANLNKE
LASAEQNKNHTNNELKKKEEQLSSYEYKLFDVCGSQDFESDLDRLKEDIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKERRRDEMLRLVPMRESIIDLKEKEIPGLRNKLQSVSGDIQNLKTGIEEQETLLGTIMP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKVD
TVSSKIELNRKLIQDQQEQIQCLKSKTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQS
LYREIKDAKEQINPLETALEKFQQEKEELIHRKHTSNKMAQDKINDIREKVKNINGYMKD
IENYIQDGKDDYKKQKETELNEVVAQLNDCDKQKEKINKEMGTMRQDIDTQKIQERWLQD
NLTLRKRREELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKG
YEEEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRVRKNMDQCSEIVTCSINSLVH
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggatcgaaaagatgagcattctgggcgtgcggagttttgggatagaggataaa
gataagcaaattatcactttcttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaagtatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgtgcgagcc
cagattcgcctgcagtttcgagatctcaacggagaggtggtggctgtgcagaggtctatg
ctttgtagccagaaaagcaaaaaaacagaatttaaaaccctggaaggagtcattactaga
aggaagcatggtgaaaatgtcagtctgagctcaaaatgtgcagaaatcgaccgagaaatg
ataagctgccttggggtttccaaggctgtcctaaataatgtcattttctgtcatcaagaa
gactccaactggcccttaagtgaaggaaaggccctgaagcaaaagtttgatgagattttt
tctgcaacaaggtacattaaagccttagaaacacttcgacaggtacgtcagacacaaggt
cagaaggtaaaagagtgtcaaacagaattgaaatatctgaagcaaaataaggagaaagct
tgtgagattcgcgatcagatcactagtaaggaagcccagttaaggtcttcacaggaaatt
gtcaagtcctatgagaatgaacttgagccactgaagaatcgtctgaaagaaattgaacac
aacctttctaaaatcatgagacttgacaatgaaattaaagccttggatagccgaaagaaa
caaatggagaaagataacagtgaattagaacagaaaatggaaaaggtttttcaagggaca
gacgagcaactgaatgacttgtatcacaaccatcagagaacagtgagggagaaagaaagg
cgcttggtagactgtcagcgcgaactggagaagctgaataaagaagcccggctcctcagc
caggaaagagaggagctgctggtggagcagggtcgtctacaacaacaggcagatcgccat
caagagcatattcgagccagagattcattaatccagtctttagcaacacatctcgaattg
gatggttttgagcatggaccctttagtgaaagacagattacaaattttcatgaacttgtg
agagagaaacaggaaagagaagcaaaaactgccagccagctcttgaatgaccttacagag
aaagaaactttgaagcagaagcagattgatgagataagggacaagaagagtggattggga
agagtgattgagctgaaaacagaactcctcaccaagaaacagagcgagctgaggaacgtg
aagaatgagcttcagcggctggagggctcatcggacaggattctggagctggaccaggag
ctcacaaaagcagaacgtgaactaagcaagactgagaaaaattgcaatgtagaagcccta
aaagcagaggtaataagcctccaaaatgagaaagctgacctggacagaagcttgcggaaa
ctggaccaggagatggagcagttaaatcaccatacaacaacacttacgcagatggagatg
ctgaccaaaaacaaaactgacaaagatgaacaaatcagaaaaataaagtctaggcacagc
agtgaactgacttcactgttggggtattttcctaacaagaaacagcttgaagactggctt
cattctaaatccaaagaaatcaatcagaccagggacagacttgccaacctgaacaaagaa
ctagcttcagctgagcagaataaaaaccatacaaataatgagctgaagaaaaaagaagaa
cagttgtccagttatgaatataagttgtttgatgtttgtggtagccaggattttgaaagt
gatttagaccggcttaaagaagacattgaaaagtcctcaaaacagcgagccatgctggct
ggagccacagccgtttactcccagttcattactcagctgacagatgaaaaccagtcctgt
tgcccagtctgtcagagagtgtttcagacagaggctgagttacaagaagtcatcagtgac
ttgcagtccaagctgaggcttgctccagataagctcaagtcaacagaatcagaactaaaa
aagaaagagcggcgccgtgatgaaatgcttaggcttgtgcccatgagggaaagcataatt
gatttgaaggagaaggaaataccaggattaagaaacaaactgcagagtgtcagcggagac
atacagaacctgaagactggcatagaagaacaggaaacactcttgggaacaataatgcct
gaagaagaaagtgctaaagtttgcctgacagatgttacaattatggagaggctccagatg
gagctgaaggatgttgaaaggaaaattgcacagcaggcagctaagctgcaaggggtagac
ttggatcgaactgtccagcaggttaaccaggaaaaacaggaaaaacaacataaagtggat
acagtttccagtaagattgaattgaaccgtaagcttatacaggaccagcaggagcaaatt
cagtgcctgaaaagtaaaacaaatgagctgaaatcagagaaactgcagatatccacgaat
ttgcaacgtcgtcagcaaatggaggagcagactgtggaattgtccacagaagttcagtct
ttatacagagagataaaggatgctaaagagcaaataaaccctttggagacagcactggaa
aagttccagcaggaaaaagaagaattaatccacagaaaacatacaagtaacaaaatggct
caggataaaatcaatgatatcagagagaaggttaaaaatattaatggttacatgaaagac
atagagaattatattcaagatggaaaagatgactataaaaagcaaaaggaaaccgaactt
aatgaagttgtagctcaactaaatgactgtgacaaacaaaaagaaaagataaataaagaa
atgggaaccatgaggcaagatattgacacacagaagatacaagaaaggtggctgcaggat
aaccttacactaaggaaaagaagagaggaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggagatgggacaaatgcaagttttacaaatgaaaaatgagcatcagaagttg
gaagagaacatagacactataaaacgaaaccacagtttggcattggggcggcagaagggc
tatgaagaagaaattcttcactttaagaaggagctccgagaacctcagtttcgggatgcc
gaggagaagtatagagaaatgatgattgtcatgagaaccacagagctggtgaacaaggac
ctggacatctactacaagactctcgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgatctttggcggagtacttatcgtggacaagatatt
gaatacatagaaattcgatcagatgctgatgaaaacgtgtctgcttctgacaaaaggcgg
aattacaactaccgagtggtgatgctgaagggggacacagccttggacatgcggggacga
tgtagtgctggacagaaggtgctagcctctctcattatccgcttggcgctggctgaaacc
ttctgtctgaactgtggcatccttgccttggatgagccgacgacaaatcttgaccgagag
aacattgaatctcttgcacatgctttggttgagatcataaaaagtcgctcgcagcagcgt
aacttccagcttctggtaatcactcatgatgaagattttgtggagctcttagggcgatct
gaatacgtggagaaattctacagggtgaggaagaacatggaccagtgctcggagattgtg
acatgcagcattaactccctggttcactaa
DBGET
integrated database retrieval system
