Microtus oregoni (creeping vole): 121457343
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Entry
121457343 CDS
T08307
Symbol
Atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin-2
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg05014
Amyotrophic lateral sclerosis
morg05017
Spinocerebellar ataxia
morg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121457343 (Atxn2l)
05017 Spinocerebellar ataxia
121457343 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
121457343 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121457343 (Atxn2l)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121457343 (Atxn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
121457343
NCBI-ProteinID:
XP_041521944
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLPATTAPPGPPAAVSPCLG
PAAAAGSGLRRGAESILAAPPPPQPGAVAIGSVRGQSTGKGPPQSPVFEGVYNNSRMLHF
LTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFK
PSDVLLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESD
MSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESS
PQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLVSREGKYIPLPQRVREGPRGGVRC
SGSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPN
NRPSGEASVPPAPAALPFIPVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVVSSASIPVT
SSVVDPGAGSISPASPKISLAPTDVKELPTKEPGRTLEAQELARIAGKVPGLQNEQKRFQ
LEELRKFGAQFKLQPSSSPETGLDPFPSRILKEEAKGKEKEVDGLLTSDPMGSPVSSKTE
SILDKEDKPPLAAVGGTEGPEQLPPSCPSQTGSPPVGLIKGDDKEEGPVTEQVKKSTLNP
NAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGP
AVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVA
ATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTP
QYPSAEQPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQ
APHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTN
MAHVTQAHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPS
PYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPA
APLPTASPALSDPDCLLT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggcctcccggcgggaccagccctcctaacggcggcctcccgggg
ccgctgcccgccaccacggctcccccggggcctcctgcggccgtctctccctgcctgggg
cctgcagccgctgccgggagcgggcttcgccgcggagccgaaagcatcttggcggcgccg
ccgccaccgcagccaggggcagtggctattggcagcgtcaggggacagagcaccggaaag
ggacccccacagtcgcctgtgtttgaaggtgtttacaataactccaggatgctgcatttc
ctgactgctgtggtgggttctacttgtgatgtaaaggtgaaaaatggcaccacttatgag
ggcattttcaaaaccctgagttcaaagtttgagctggcagtagacgcagtacaccggaaa
gcatctgaaccagcaggtgggcctcggcgggaagacattgtggacaccatggtgtttaaa
ccaagtgatgttctgcttgttcacttccggaatgttgacttcaattatgctacgaaagac
aagttcaccgactcagccatcgccatgaactccaaggtgaatggagaacacaaggagaag
gtgctacaacgttgggagggcggcgacagcaacagcgatgactacgatctggaatctgat
atgtccaatggatgggatcccaatgagatgttcaaatttaacgaagagaactatggcgta
aagaccacctatgatagcagtttatcttcttacacggttcccttggaaaaggacaactca
gaagagtttcggcagcgagagctgcgtgcagcccagttagctcgagagattgagtcaagt
ccccagtaccgcctacggattgccatggaaaatgatgatgggcgaacggaggaggagaag
cacagcgcagttcagcggcaggggtctgggcgggaaagccccagcttggtgtccagggaa
gggaagtatatccctctgcctcaacgagttcgggaaggtccccggggaggagttcgatgc
agcggctctcgaggagggcgacctggtcttagctctttgccacctcgtggacctcaccat
cttgacaatagcagccctggccctgggtctgaggcacgtggtatcaatggaggcccttcc
cgcatgtcccccaaggcacagcgccctttgagaggtgccaagacgttatcttcgcccaac
aataggccttctggagaagcttctgttcctccagcacctgcagctctcccttttattcca
gtgggccggatgtaccctccacggtctcccaagtctgctgcccccgccccagtctcagct
tcctgtcctgagcctcccattggttcagcagtagtatcctctgcctccatccctgtgaca
tcatcagttgtggatcctggagcaggctctatttccccagcatctcccaaaatctccctg
gcccccacagatgttaaagaactcccaacaaaggagcccggtaggactttggaggcccaa
gagctggcccggatagctgggaaagtccctgggcttcagaatgaacagaaacgatttcag
ttggaagaactgaggaagtttggggcccagtttaagctgcaacctagtagctcccctgag
accggcctggatccatttccttcccggatcttaaaagaagaggccaaaggaaaggagaag
gaggtggatggcctattgacttcagatcccatgggatccccagtctcctccaagacagaa
tccatattggataaggaagacaaaccacccctggcagcagtagggggtactgaggggcca
gagcagctcccaccatcttgccccagccaaactggcagtcccccagtaggcctcatcaag
ggagatgacaaagaggagggccctgttactgaacaagtaaagaagtctactttgaacccc
aatgccaaggagttcaatccaacaaagcctctgctgtctgtgaacaaatctaccagtact
ccaacttcaccagggccccgtactcactcaacaccttccataccggtgctgacagcaggc
cagagtgggctctacagtccccagtacatctcatatatacctcagatccacatgggacca
gctgtgcaggcacctcagatgtatccatatcctgtttccaattcggtgcctgggcagcag
ggcaagtaccggggtgcaaaaggctcacttcccccccagcgctcagaccaacaccagcca
gcctcagcccctccgatgatgcaggctgctgctgctgctgctggcccacccctagtggct
gccacaccttattcctcctacatcccctacaacccacagcagttcccaggccagcctgcc
atgatgcagcccatggcacactacccttcacagccggtctttgcccctatgcttcaaagt
aacccacgaatgttgacatctggaagccacccccaggccattgtatcatcctccactcct
cagtacccctctgcagagcagcctaccccccaagccctctatgccactgttcaccaatcc
tatccacaccatgccacacagctccatggccatcagccacagccggctaccacacctact
gggagccagccacaatcccagcatgcggcccccagtcctgttcagcaccaggcggggcag
gccccacacctgggcagtggacagccacagcagaatctgtaccatccaggggccctaaca
ggcacacctccttctctaccaccgggaccttctgcccagtcccctcagagcagctttccc
cagccagctgctgtgtatgccatccatccccaccagcagctgccccacggcttcaccaac
atggcccatgttacccaggcccatgtccaaactggagtcacagcagccccgcccccacac
cctggggcaccccacccgccccaggtgatgctgctgcaccccccccagggccatgggggc
cccccccaaggcgcggtgcccccgagtggggtgcctgcactctcagcttccacaccctca
ccctacccctacatcggacacccccaaggtgagcagcctggccaggcgcctggatttcca
ggaggagccgatgacaggattctatgtagggtgggcagaagccacagtcgccgccgccag
gggcttgctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgatccagca
gcccccctccccactgcctccccagctctcagtgaccccgactgtctcctgacttag
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