Microtus oregoni (creeping vole): 121457462
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Entry
121457462 CDS
T08307
Symbol
Tnrc6a
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121457462 (Tnrc6a)
03036 Chromosome and associated proteins [BR:
morg03036
]
121457462 (Tnrc6a)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121457462 (Tnrc6a)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121457462 (Tnrc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
M_domain
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121457462
NCBI-ProteinID:
XP_041522070
LinkDB
All DBs
Position
Unknown
AA seq
1948 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSDNGTSTATSTNNNAKRATASNQQPPPQQQQQQQQQQQEQQQQPQALPRY
PREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNNQSESSAVTNQQPPNNGEVQNS
KTQSDINHNTSGSHYENCQRGPVSSTSDCSTSCKNAVKDLLEKEAWPSAPGSDPELASEC
MDADSASSSESERNITVMASGNTGGEKDGLRNSTGLGSQSKFVVGSSSNNVGHGSSSGPW
GFPHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVL
ENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVSGSSTHGTWGNLQETCEPEVSG
TQKVLFSGQPQNITTETTGPNNTTNFMTSSLPNSGSVQNNELPTSNPGAWRVSTMNHPQI
QAPSVMNGTSLSHLSNGESKTGGSYGTTWGAYGSNYSGDKCAGPNGQANGDTVNATLMQP
GVNGPMGTNFQVTTNKGGGMWESGTTNSQSSPWGSGNGANSGGSRRGWGSPAQNTGTSLP
SVEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQNSVWAKTGGTVESD
GSTESTGRLEEKVTGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTA
WDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPNSNDTSSVSGWGDPKPTLRWG
DSKGSNCQGGWEDDSAATGMVKSNQWGNCKEEKSAWNDSQKNKQGWGDGQKSNQGWSISA
SDNWGETSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPNNSSGWDES
SKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKPPGTGWLGG
PIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNIPDGSSRS
DQQAQMHRLLPSASAVSSKEASSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGE
PITATSSTSTWGSTSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEEDVEIGMWN
SNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEDAWINPFVKQFSNISF
SRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMER
NPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGTQNLNSVRQNGNPS
MFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLF
GPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRVQNQRSVPSANRQQQDQQGRPLSVQQQM
MQQSRQLDPSLLVKQQTPPSQQPLHQPAMKSFLDNVMPHTTPELQKGPSPVNAFSNFPIG
LNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPY
DFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTP
GSVINSLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSA
RNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRV
GGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNL
QHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPGWQS
LGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSS
SDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagagagaaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctgataacggcacttccacagcaaccagc
actaataataatgccaagcgagctacagccagcaatcagcagccgccgccgcagcagcaa
cagcagcagcagcagcagcagcaagagcagcaacagcagccacaggccttgcctcggtat
cctcgtgaagtacctccacgatttcgccaccaggaacacaaacagcttctaaagaggggt
cagcattttcctgtcatagcagcaaacctgggatctgctgttaaggtgttaaacaaccaa
tcagaaagcagtgctgtaacaaatcaacagccaccaaataacggagaggtgcagaacagc
aaaacccagtcagatataaatcataatacttcaggatcccattatgaaaattgccagcgg
ggacctgtgtcttctacaagtgactgtagcacaagctgtaagaatgctgtaaaggacttg
ttggaaaaagaagcatggccctcagcccctggcagtgatcctgagttggcctcagaatgt
atggatgctgattctgcctccagttctgagtcagagagaaacatcactgtcatggcttca
gggaatacaggtggtgaaaaagatggccttcggaacagcactggactcggttctcaaagc
aagtttgtggttggtagcagcagcaataatgtgggtcatggaagtagttctgggccatgg
ggcttcccccatggagccataataagcacatgtcaggtctctgtggatgctcctgaaagc
aaatcagaaagtagtaacaatagaatgaatgcttggggcactgtaagttcttcatcaaat
ggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctggccagtatta
gaaaacaatggacttgccctaaaagggcctgtagggagtgggagttctggcatcaatatt
cagtgtagtaccataggccagatgcctaacaatcagagtatcaactctaaagtcagtggc
tcttctacccatggtacctggggcaaccttcaggaaacttgtgagcctgaagtaagtggt
acacagaaggttttattcagtggtcaacctcagaatatcaccactgaaacaactggacca
aataacactactaactttatgacctctagtttaccaaactccggttcagtacagaataat
gaactgcctaccagtaatccaggggcctggcgtgtgagcacaatgaatcatcctcagata
caggctccgtcagttatgaatggcacttccctttctcaccttagcaatggagagtcaaaa
actggaggctcctacggtactacatggggtgcctatggttctaattactctggtgacaaa
tgtgcaggccctaacggccaagccaatggtgacactgtgaatgcaacgctaatgcagcct
ggcgtcaatgggcctatgggcactaactttcaagttaccacaaataaagggggaggtatg
tgggagtctgggacaacaaattcccagagttcaccatggggaagtggaaatggtgcgaat
tctggaggaagtcgaagaggatggggaagtcctgcacagaacactggcactagtctaccc
agtgttgagtggaacaaactgcctagcaatcagcattccaatgacagtgcaaatggcaat
ggtaagaagtttacaaatggatggaaatctactgaggaagaggatcagggttccgccaca
tctcagacaaatgagcaaaacagtgtgtgggccaaaacaggaggcacagtggagagcgat
ggtagtacagagagcactggacgccttgaagaaaaagtaacgggggaaagtcagagtaga
gatagaagaaaaattgatcagcacacattactccaaagcattgtaaacagaactgactta
gatccacgtgtcctatccaactctggttggggacagactcctattaagcagaatactgcc
tgggatacagagacatcaccaagaggggaaagaaaaactgacaatgggacagaggcctgg
ggaagctctgcaacacagacttttaactcaggggcatgtatagataagactagccctaat
agtaatgatacctcatctgtatcagggtggggcgatcccaaacctactctgaggtgggga
gattccaaaggctcaaactgccagggggggtgggaagatgattctgctgctacaggaatg
gttaaaagcaatcagtgggggaattgcaaagaagagaagtctgcatggaatgattcgcaa
aagaacaaacaggggtggggtgatggacaaaagtcaaaccaaggttggtccatttctgcc
agtgataactggggagaaacttccaggagtaaccattggggtgaggctaataagaaatcc
agctcaggaggtagtgacagtgacaggtccatttctggttggaatgaacttggtaaaact
agttcttttacatggggaaataatataaatccaaataattcatcaggatgggatgaatct
tctaaacctaattcttcccagggatggggagaccctccaaagtgtaatcagtctctaggt
tggggagattcatcaaaaccagttagttctccagattggaacaagcaacaagacattgtt
ggatcatgggggattccaccagccaccggcaagcctcctggtacaggctggctgggagga
cctattccagctccaacaaaggaggaagaacccacaggctgggaggagccatccccagaa
tctatacgacgtaaaatggagattgacgacggaacttcagcttggggagatccgagcaaa
tacaactacaaaaatgtgaacatgtggaataaaaacatcccagatggcagcagccgctca
gaccagcaagcacagatgcatcgtttgctgccatctgcaagtgctgtctcaagcaaggag
gcaagcagtggctctggctggggtgagccctggggggagccttctactccagccacgact
gtggataatggaacttcagcctggggtaagcccatagacagtggtcccagctggggagaa
cccattactgcgacatccagcacatccacgtggggctccacctctgttggtccacaatca
ttaagcaaatctgggcccaaatctatgcaagatggctggtgtggtgatgatatgccatta
cctggaagtcgccccactggctgggaagaggaggaagatgtagagattgggatgtggaac
agtaactcatctcaagagcttaactcatctttaaattggccaccatataccaagaaaatg
tcatcaaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaaaggtgga
aacaaacaagaagacgcatggataaatccatttgttaaacagttttcaaatatcagtttt
tcgagagactcaccagaagaaaatgtacagagcaataagatggatctttctggaggaatg
ttacaagacaagcgaatggagatagataaacatagcctaaatattggtgattacaatcga
acggtcgggaaaggtcctggctctcggcctcagatttccaaagagtcttccatggagcgc
aatccttattttgataaggatggcattgtagcagatgaatcccaaaacatgcagtttatg
tccagtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccaggcccttggc
tccatagcagggctgggtacgcaaaacttgaattctgttagacagaatggcaatcccagt
atgtttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctccagcacaa
cctctcagttcatctcagcctaatctccgtgctcaagtgcctcctccattactctcccct
caggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaacccgctattt
ggccctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttctcagatc
tcccagttacagcgattgttagcgcagcagcagagggtgcagaatcagagaagcgtgcct
tctgctaaccgacagcagcaagaccagcagggtcgacctcttagtgtacagcagcagatg
atgcaacagtctcgtcaacttgatccaagcctgctggtgaagcagcagactccgccttct
cagcagccgctccatcagccagccatgaagtccttccttgacaatgtcatgccccacact
acacccgagctgcagaaagggccatcgccagtaaatgctttcagcaactttcctataggc
ttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagaaccacagtcaaga
ctaaggaagtggactacagtggacagcatttctgtgaacacatctttggatcaaaactcc
agcaaacatggtgctatttcaagtggttttaggctggaagaatctccatttgttccctat
gactttatgaatagcagtacttcaccagccagtcctccaggttcaataggagatggctgg
ccacgtgccaaatcgcctaacggctctagcagtgttaactggccaccagaatttcgccct
ggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcct
ggcagtgtcataaacagtctttcgattaatactgtgcgggaagttgatcacctcagggac
aggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagtgcctggtca
tccattcgtgcctccaactacaatgttcccctcagcagtacagcacaaagcacttcagcc
agaaatagtgattccaaattgacgtggtctcctggttcagttacaaacacctctctggct
catgagctgtggaaagtccctttgccacctaaaaacatcactgctccgtcccgcccacct
ccggggctgactggtcagaagccacccttgtctacgtgggataattccccccttcgtgta
ggtggaggatggggaaattctgatgccagatataccccaggttccagctggggtgagagc
agctcagggagaataacgaattggcttgttttgaaaaacctcacacctcagattgatggc
tcaactctgcgcaccctgtgcatgcagcatggtccactgattacattccatctgaacctt
caacatggaaatgctctggtccgttacagttcaaaagaagaggtagtgaaggcacaaaag
tctctgcacatgtgtgtgctggggaacactactattctcgctgagtttgccagtgaagag
gagatcagtcgcttctttgcacaaagtcagtctctgaccccttctcctggctggcagtct
ctcgggtccagccagagccggctgggctccctcgactgttcccactcattctccagccgg
accgatctcaatcactggaatggtgctgggctgtcgggaactaactgtggagaccttcac
ggcacttccctctgggggaccccacattattccacaagcctgtggggtcccccaagcagc
agcgacccccggggaattagcagcccatcccccattaatgcttttctttctgttgaccac
ctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
