Microtus oregoni (creeping vole): 121458139
Help
Entry
121458139 CDS
T08307
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
morg04121
]
121458139 (Rbbp6)
Enzymes [BR:
morg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121458139 (Rbbp6)
Ubiquitin system [BR:
morg04121
]
Ubiquitin ligases (E3)
U-box type E3
121458139 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121458139
NCBI-ProteinID:
XP_041523209
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSAHPTPSISSLSSNPSSLTPSVPGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKLLPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANMSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFS
RSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS
PTKRNVPQGETEREYFNRYREVPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYEK
YYKGYAVGAQPRPSANREDFSPERLLPLNIRNSPFTRGRREDYAAGQSHRNRNLAGNYPE
KLSTRDSHNQKDNTKSKEKDSETIPGDNKGNKHKKHRKRRKGEESESFLNPELLETSRKS
RESSGVDDTKTDTLFVLPSRDDATPVRDEPMEAESITFKSVSEKDKREKDKPKVKSDKTK
RKSDGSATAKKESVLKPSKGSQEKIDGEREKSPRSEPPLKKAKEEAAKTDSVKPSSLSQK
DDKVTGTPRKAHSKSAKEHQETKPVKEEKVKRDSSKDIKSEKPASKDEKAKKPEKNKLLD
SKGEKRKRKTEEKNVDKDFESSSMKISKVEGAEIVKPSPKRKMEGDVEKLERTPEKDKIT
SSTAPAKKIKLNRETGKKIGSAENTSTTKEPSEKMESTSSKIKQEKVKGKAKRKVAGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDIKSTQPIQSVGKPSSIIKNVTTRPSAATKYTEKESEQSEKIQKLTKEV
SHEMTQHEVKSSKGSASSEKGRTKDRDHSAVLEKEIPDKRKSSTQPEKESTVDRLSEQGN
CKNLSQSSKETRTSDKHESIRGSSNKDFTPGRDKKVDYDNREYSSSKRRDERNELARRKD
SPPRSKDSSSGQKSKPREERDLPKKGTESKKSSSSPPRDKKPHDHKTPYDTKRSCEETKS
VDKTSGKEREKHAAEARNGKESSCSKLPYIPNPPDPTPAEKELVAGQVDKNTIKPKPQFS
HSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEEAVSSVSKDLKEKAAEKAKESLTI
AVAGQPSADRSQSQSSPSVSPSRSQSPSGSQTRSHSSSASSAGSQDSKKKKKKKEKKKHK
KHKKHKKHKKHAGADGDAEKSQKHKHKKKKAKKSKDKEKDDQKAKSVTV
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatcttcagatcaccaacgcgcagacgaaggaagaatacactgatgat
aatgcgctaattcctaaaaattcatctgtaattgtcagaaggattcctattggaggtgtt
aagtccacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggcccaccacctccatcttatacc
tgtttccgttgtggtaaacctggtcattatattaagaattgcccaacaaacggggataag
aactttgagtctggccctagaatcaaaaagagcactggaattcctcgaagttttatgatg
gaagtgaaagaccctaacatgaaaggtgcaatgcttacgaacaccgggaaatacgcaatc
cccactatagatgcagaggcctatgcaattgggaagaaagagaagccaccctttttacca
gaggaaccatcatcatcttcagaagaagatgatcctatcccagatgagctcttgtgcctc
atctgcaaggacattatgactgatgctgttgtcattccctgctgtggaaacagttactgt
gatgaatgtattaggacagcactcctggaatcagatgaacatacgtgtccaacatgtcat
cagaacgatgtttctcctgatgctttaattgccaacaagtttttacgacaggctgttaat
aacttcaaaaatgaaactggctatacaaaaagactacgaaaacagttacctccaccccct
cccccaataccaccaccaagaccactcattcagcggaacctgcagcctctgatgagatct
ccaatatcaagacagcaggatcctctgatgattccagtgacgtcttcctcagctcaccca
actccctctatatcctcattaagttcaaatccgtcttccttgactccttctgtgcctgga
aatccatcttctgccccagctccagtacctgatataactgcaacagtgtctatatcagtt
cattcagaaaagtcagatggtccttttcgggattctgataataaattattaccagctgct
gccctcgcatcagaacattctaagggagcctcctcaattgcaattactgctcttatggag
gaaaagggttaccaagtgcctgtccttggaactccatctttgttggggcagtcattatta
catggacagttgatccccacaactggtccagtaagaataaatgctgcacgcccaggtggt
ggtcgaccaggttgggaacattccaacaagcttgggtacctggtttctccaccacagcaa
attagaagaggggaaagaagttgttacagaagtataaaccgcgggcgacaccacagcgaa
cgatcacagaggactcaaggcccatcactaccagcaacaccagtctttgtgcctgttcca
ccacctcctttgtatccgccgcctccccatacacttcctcttcctccaggtgttcctccc
ccacagttctctcctcagtttcctcctggccagcccccacctgcaggatatagtgtccct
cctccagggtttccaccagctcctgccaatatgtcaacaccttgggtgtcatcaggagtt
cagactgctcattcaaataccatccctacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcaacggcgattaaaggaagaggaaaagaaaaagtccaagctagatgag
tttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtagg
cgctcattttccaggtctaaatctccctatagtggttcatcatattcaagaagttcatac
acttactcaaagtcaagatctggctccacacggtcccgctcttactctcgatccttcagc
cgctcgcactctcgttcctattcacgatcacctccataccccaggagaggcagaggcaag
agccgtaattaccgttcacggtccagatctcatggatatcaccgatctaggtcaaggtca
cctccatatagacgttatcattcacggtcaagatctcctcaagcatttaggggacagtct
cccactaaacgcaatgtacctcaaggcgaaaccgagcgtgagtattttaatagatacaga
gaagttccacccccttacgacatcaaagcctattatggacggagtgtcgactttagagac
ccatttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtatgaaaag
tactacaaagggtatgctgtgggggcacagcctagaccctcagctaacagagaggacttc
tccccagagagacttttacctcttaatatcagaaattctcccttcacaagagggcgcaga
gaagattatgctgctggacaaagtcatagaaataggaatctagctggcaactatccagaa
aaactttcaacaagagatagtcacaatcagaaagataacacaaaatcaaaagagaaggat
agtgagaccattccaggagacaataaaggaaacaagcataagaaacacagaaaacgaaga
aagggggaggagagtgagagctttctgaaccccgaactgttagaaacatccaggaaatcc
agagagtcatcaggcgttgacgacactaagacagatacactgtttgttctcccaagtaga
gatgatgctacacctgttagggatgaaccaatggaggcagaatcaatcactttcaaatca
gtgtctgaaaaagacaagagagaaaaagataagccaaaagttaaaagtgacaaaaccaaa
cggaaaagtgacggatctgctacagccaagaaggaaagtgttttaaaaccttctaaagga
tcccaagaaaaaatagatggggagcgtgaaaaatctccacggtctgaacctccacttaaa
aaagccaaagaggaggctgcaaagactgactctgtaaaaccttcgtcattgtctcagaag
gatgacaaggtcaccggaacgcccagaaaagcccactctaagtctgcaaaagaacatcag
gagacaaagccagtcaaggaggagaaggtgaaaagggacagttccaaagacatcaagtca
gaaaagccagccagtaaggatgaaaaagccaagaagcctgagaaaaataagctgcttgat
agcaagggagaaaaaagaaagagaaaaactgaagaaaagaatgtagataaagattttgag
tcatcgtcaatgaaaatctctaaagtagaaggagctgaaatagtgaaaccatcaccaaag
cgcaaaatggaaggtgatgttgaaaagctagaaaggaccccagaaaaggacaagatcaca
tcatcaactgccccagccaaaaaaatcaaacttaacagagaaactgggaaaaaaattgga
agtgcagaaaatacatctactacaaaagaaccctctgaaaaaatggagtcaacatctagc
aagattaaacaggaaaaagtcaagggaaaggccaaacgaaaagtagctgggactgaaggc
tccagctccacgcttgtggattataccagtacaagctcaactggaggcagtcctgtgcgg
aaatctgaagaaaagacagatacaaagagaacagtcattaaaactatggaggaatataat
aatgataacacagctcctgctgaagatgttataattatgatccaggttcctcagtccaaa
tgggataaagatgactttgaatctgaagaagaagatattaaatccacacaacctatacag
agtgtggggaaaccatctagtattataaaaaatgttactactaggccctcagctgcaacc
aagtacactgagaaagaaagtgagcagtcagagaaaattcagaagctcaccaaggaggtg
agccatgaaatgacacagcacgaggtcaaaagctcaaagggctctgcgtccagtgaaaag
gggagaaccaaagaccgggaccactcggcggtattagaaaaggaaatccctgacaagagg
aagagcagcacccagccagagaaggagagcactgtggaccgtctgagtgaacagggaaat
tgtaaaaatctgtctcaatcttctaaagagaccaggacttcagataagcatgaatccatt
cgtggttcctcaaataaagacttcactcctggtagagataagaaagtggactatgacaac
agagaatattccagttccaagcgaagagatgagagaaatgagctagcaagaaggaaggac
tctcctcctcggagtaaagattcttcatctggacagaaaagtaagccaagggaggagaga
gatctgcctaaaaaggggacagagtccaaaaaaagcagttctagtcccccaagagacaaa
aagcctcatgatcataaaaccccctacgataccaaacgctcatgtgaagagacaaagtct
gtagataaaacctctggcaaggaacgggaaaagcatgctgctgaggctcgaaatgggaaa
gagtccagctgcagcaagttgccatatataccgaacccgccagaccccactccagctgag
aaagagctggttgccggacaggttgataagaacaccatcaagccaaaacctcagttcagt
cattcctctcgactttcctctgatctaactagagagaccgatgaggctgcttttgaacca
gactataatgagagtgacagtgagagtaatgtgtctgtgaaggaagaggaggctgtctcc
agtgtctccaaggacttgaaagagaaagcagcagagaaagcaaaggagagcttgactatc
gcagtggccggccagccaagtgcagacaggagccagagtcagagtagccccagtgttagt
ccaagtagaagtcagagcccttccggtagccagacccgaagccatagcagcagtgccagc
tcagcaggaagccaagacagcaagaagaagaagaagaagaaagaaaagaagaagcacaag
aagcataaaaagcacaagaagcataagaagcatgcaggtgcggatggggacgccgagaag
agccagaaacacaaacacaagaagaagaaggcaaagaagagcaaggacaaggagaaagat
gaccaaaaagcgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
