Microtus oregoni (creeping vole): 121458461
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Entry
121458461 CDS
T08307
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
121458461 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
morg04040
]
121458461 (Trpa1)
Ion channels [BR:
morg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121458461 (Trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Acetate_kinase
Motif
Other DBs
NCBI-GeneID:
121458461
NCBI-ProteinID:
XP_041523707
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MKCSLRRMLRPEERKEIQGVAYCGVKEDTDCFKDSFKVDMEGNTYRLEDFIKNRRKLSKF
EDENISPLHHAAAEGQIELMKMIIHGSSCEVLNIMDSCGNTPLHWAAEKNQVESVKFLLS
QGANPNLRNSTMMAPLHIAVQSSYNEMIKVLTEHSTTNINLEGENGNTALMSTCAKDNSE
ALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKKCMELILKYGEKHGFSRGTHINFVNHKK
VSPLHLAVQSGDLDMIQMCLDNGAHVDMIENGKCMALHFAATQGATDIVKLMISSYTGSR
DIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGAKVDIKDHLGRNFLHLTVQQPYGLKNLRPEFMQMQHIKELVMDEDNDGCTPLHY
ACRQGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLK
CTDRLDEEGNTALHFAAREGHAKAVAMLLNYNAEILLNKQHASFLHIALHNKRKEVVLTT
IRSKRWDECFQVFSHYSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLALTKKLTTTQDVRYEPLATLNVMVQHNRIELLNHPVCKEYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTFLVVKIKPGMAFNSTGIINETTNHLETVDTLNSFPIKICMILVF
LSSLFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSIIFVLPLFLNIPAYMQWECGAIA
IFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLSFQDAF
STPLLSLIQTFSMMLGDINYRDAFLEPFLKKELAYPVLTFGQLIAFTMFVPIVLMNLLIG
LAVGDIAEVQKHAALKRIAMQVELHTNLEKKLPLWFLRKVDQQYTVVYPNRPRHGRMLRF
FHYFLCTQETRQEAPNTDMCLEIEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETE
DEDNHCSFQDKFKKERLEQMQSKWNFVLNAVKNKPH
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcagcctgaggagaatgctgcgcccagaggagaggaaggagatccagggcgtt
gcctattgcggcgtgaaggaagacacggactgctttaaagactcctttaaggtggacatg
gaaggaaatacgtatagactagaagacttcataaagaaccgaagaaaactaagcaaattt
gaagatgaaaatatctcccctttacatcatgcagcagcagaagggcaaattgagctcatg
aagatgatcatccatgggtcttcttgtgaagtactgaatataatggatagttgtggaaat
actccactacactgggctgcagaaaaaaaccaagtcgaaagtgtgaagtttcttcttagc
caaggggcaaatccgaacctccggaacagcactatgatggcaccccttcacatagccgta
cagtcctcatacaatgaaatgatcaaggtcttgacggagcacagcaccactaacatcaac
ttagaaggagagaacggaaacacagctttgatgtccacatgtgccaaagacaacagtgaa
gctttgcagattctgttagaaaaaggagctaaactgtgtaaatcaaataaatggggagac
taccccgttcaccaggctgcattttcaggtgccaaaaaatgcatggaattaatactgaaa
tatggcgaaaagcatggctttagcagggggactcatatcaacttcgtgaatcataagaaa
gtcagcccgctccacctcgcagttcaaagtggtgatctggacatgattcagatgtgccta
gacaacggtgcacacgtcgacatgatagagaatggcaaatgcatggccctccattttgct
gccacccaaggggccactgacatcgttaaactcatgatctcatcttacactggaagccgt
gatattgtgaatgcagtcgatggcaaccaggagaccttgcttcacagagcctcattgttt
gatcaccatgacctggcagactacttaatttcagtgggagcagacatcaacagcaccgat
tctgaaggacgctctccacttattttagcaactgcatctgcatcttggaatattgtgaat
ttgctcctctctaaaggtgccaaagtagacataaaagaccatctggggcgtaacttttta
catttgactgtacaacagccttatggactaaaaaacttgcggccagagtttatgcagatg
caacatattaaggagctggtgatggacgaagacaacgatgggtgtacgcctctccactat
gcgtgcaggcagggagtcccagtctctgtaaataaccttctcgggttcaacgtgtccatt
cactccaaaagcaaagataagaaatcgcccctgcattttgcagccagctatggacgcatc
aacacatgtcagaggcttctacaagacataagcgacacaaggcttttgaatgaaggggat
ctccatgggatgacccctcttcacctggcagcgaagaacggacacgataaagtcgttcag
cttcttctgaagaaaggcgcattgttcctcagtgaccacaatggctggacggctttgcat
catgcctccatgggtgggtacactcagaccatgaaggtcatccttgacactaacctgaag
tgtactgatcgactagatgaagaagggaacacagcgctccactttgcagcacgggaaggc
cacgccaaggctgttgccatgctcctgaactacaacgctgaaatcctcctgaacaagcag
cacgcctcctttcttcatatcgcactgcacaataagcggaaggaagtggttctcacaacc
atcaggagtaaaagatgggatgagtgttttcaggttttcagccattattctccaagcaat
cgatgtccaatcatggaaatggtggaatacctacctgagtgcatgaaagttcttttagac
ttctgcatgataccttccacagaggacaaatcctgtcaggactaccatattgaatataat
ttcaaatatcttcagtgcccactagcattgaccaaaaaattaacaactacccaggatgtg
agatatgagcctcttgcaaccctcaatgtcatggtacaacataaccgcatagagctcctc
aaccaccctgtgtgtaaggagtacttactcatgaaatggtgtgcctatggattcagagct
catatgatgaacttaggatcttactgtcttggtctcatacctatgacctttcttgttgtc
aaaataaagcctggaatggccttcaactcaacgggaataatcaacgaaactactaatcat
ttggaaacagtagacactctgaattcatttccaataaaaatatgtatgattctagtgttt
ttatcaagtttatttggatattgcaaagaagtggtccaaatcttccaacagaaaaggaac
tacttcctggattacaacaatgctctggagtgggtcatctacacaaccagtatcatcttc
gtgctgcccttgtttctcaacatcccggcctatatgcagtgggaatgtggagcaatagcg
atattcttctactggatgaacttcctgttatatcttcagaggtttgagaactgtggcatt
ttcattgttatgttggaggtgatttttaaaactctgttgagatcgacaggagtgttcatc
ttcctcctattggcttttggcctcagcttttacgtcctcctgagtttccaagacgccttc
agcactccgttgctttccttaatccagactttcagtatgatgctgggtgacatcaactat
cgagatgccttcctagaaccattcttaaaaaaggaattggcatatccagtcctgaccttt
gggcaacttattgccttcacaatgtttgtcccaattgttctcatgaatttactaataggt
ttggcagttggggacattgctgaggtccagaagcatgccgcattgaagaggattgctatg
caggtggaacttcataccaacttggagaaaaagctgccactgtggttcctacgcaaagta
gatcagcagtacaccgtcgtgtatccaaacagacctcggcatggcaggatgttaagattt
tttcattactttctttgtacacaagaaacacggcaagaagcaccaaacactgacatgtgt
ttggaaatagaaatattgaagcagaaatacaggctgaaggacctcacttctctcttggaa
aagcagcatgaactcatcaaactcatcatccagaagatggaaatcatctcagagacagag
gacgaagataaccattgctctttccaggacaagttcaaaaaggagcggctagaacagatg
cagagcaaatggaattttgtgttgaatgcagttaagaacaaaccacactaa
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