Microtus oregoni (creeping vole): 121458865
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Entry
121458865 CDS
T08307
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121458865 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121458865 (Sf3b1)
03036 Chromosome and associated proteins [BR:
morg03036
]
121458865 (Sf3b1)
Spliceosome [BR:
morg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
121458865 (Sf3b1)
Complex B
121458865 (Sf3b1)
Complex C
U2 SnRNP specific factors
121458865 (Sf3b1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121458865 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
121458865
NCBI-ProteinID:
XP_041524123
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MHLAVLSRWQSAYVPECGARSGARTSSAQLLRRRAGRGGERKCLGAPVPSVCVRVDKMAK
IAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATEL
EDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHR
RTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKV
VNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSE
TPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVSDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgcggttctatctaggtggcagtcggcttacgtgccagagtgcggcgcgcgt
tccggagcgcgcacgtcgagcgcgcagctcctccgtcggcgggcgggccgcggcggcgag
cggaagtgcctgggagcgccagttccgtctgtgtgtgttcgagtggacaagatggcgaag
atcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggcaagaaggca
gctcttgatgaagcccaaggagtgggccttgattccacaggttattatgaccaagaaatt
tatggtggaagtgatagcagatttgctggatatgtgacatcaattgctgcaactgaactt
gaagatgatgacgatgactactcatcctcgaccagtctgctcggtcagaagaagcctggg
taccatgcccccgtggcactgcttaacgacataccgcagtcgacagagcagtacgatcca
tttgctgagcaccgtcctccgaagatcgcagaccgggaggatgagtacaagaagcacagg
cggaccatgataatctccccagagcgtcttgatccctttgcagatggagggaagacccct
gaccctaaaatgaatgccagaacttacatggatgttatgcgggaacagcatttgactaag
gaagagagagaaattaggcaacaactagcagaaaaagctaaagctggggagcttaaagtc
gtgaatggagcagcagcatcccagcccccctcaaaacgaaaacggcgctgggatcaaacc
gctgaccagactcctggtgccactcccaaaaagctgtcaagttgggatcaggcagagacc
cctggacataccccttctttaagatgggatgagacaccaggtcgtgcaaaaggaagtgaa
actcctggagcaaccccaggttcaaaaatatgggaccctacacctagtcacacacctgcg
ggagctgctactcctggacgaggcgataccccaggccatgcaaccccaggccacggtggt
gcaacttccagtgctcgtaagaacagatgggatgagacccccaaaacagaaagagatact
cctgggcatggaagtggatgggctgagacgcctcgaacagaccgaggtggagactccatc
ggtgagacacccactcctggagcaagcaaaagaaagtctcgttgggatgaaacgccagct
agtcagatgggtggaagcactcctgttctgactccaggaaagacaccaattggcacgcca
gccatgaacatggctacccccacgccaggtcacataatgagcatgactcctgagcagctt
caggcatggcggtgggagagagaaattgatgagcggaaccgcccactttctgatgaagaa
ttagatgctatgtttccagaaggatacaaggtccttccccctccagccggttatgtccct
atccggaccccagctcgtaaactgaccgcaacccccacgcctttgggcggcatgactggg
ttccacatgcagacggaagataggactatgaagagtgtgagcgaccagccgtccgggaac
cttccgtttctgaaacccgacgacatccagtactttgataagctgttggtcgatgtggac
gaatccacacttagtccagaggagcagaaggagaggaaaataatgaagttgcttttgaaa
attaagaatggtacacctccaatgagaaaggctgccttacgtcagattactgataaagct
cgagaatttggggctggacctttgtttaaccagattcttcctttgttgatgtctcctaca
cttgaggatcaagagcgtcatttacttgtgaaagttattgatagaatattgtataaactt
gatgacttagtgcggccgtatgtgcacaagattctcgtggttattgaaccactgctgatt
gatgaagattactatgctagagtggaaggcagagaaattatttctaatttggcaaaggcc
gctggtctggctactatgatttccaccatgagacctgacatagataacatggatgagtat
gtccgaaacacaacggctagagcttttgctgttgtagcctctgccctgggcattccttct
ctattgcccttcttaaaagctgtgtgcaaaagcaagaagtcttggcaagcgaggcacact
ggcattaagattgtacagcagatagctattcttatgggctgcgctatcttgccacatctc
agaagcttagttgaaatcatcgaacatgggcttgtggatgagcagcagaaagtccggacc
atcagtgctttggccattgctgctttggctgaagcagcaactccttacggtatcgaatct
tttgattctgtactcaaacctctatggaagggtatccgtcaacacagaggaaagggtttg
gccgctttcttaaaggctattgggtatcttattcctcttatggatgcagaatatgccaac
tactatactagagaagtgatgttgatccttattcgagagttccagtctccagatgaagag
atgaagaaaattgtattgaaggtggtgaagcagtgctgcgggacggacggggtggaagcc
aactacattaagacagagatcctccctcctttcttcaaacacttctggcagcacagaatg
gctctggatagaagaaattaccgacagttagttgatacgactgtggagttggcaaacaaa
gtgggagccgcagagatcatatctaggattgtggatgatctgaaagatgaagctgagcag
tacaggaagatggtgatggagacaattgagaaaattatgggcaacctgggtgcagcagat
attgatcacaaactcgaagagcagctgattgatggcattctctatgcgttccaggaacag
accacagaggattcggtaatgttgaacggctttggcacagtagttaatgctcttggcaaa
cgagtcaaaccgtacttgcctcagatctgtggtactgttttgtggcgtttaaataacaaa
tcagcaaaggttcggcaacaggcagctgacttgatttcccgcactgctgttgtaatgaag
acttgtcaagaggaaaaactgatggggcacttgggtgtggtgctgtatgaatacttgggt
gaagaataccctgaagtattggggagcattctcggagcgctgaaggctattgttaacgtt
ataggtatgcacaagatgacaccaccaattaaagatctgctgcctagactcacccccatc
ttaaagaacaggcatgaaaaagtacaggagaattgtatcgatctcgttggacgcattgct
gacaggggagcagaatatgtatctgcaagagagtggatgaggatttgctttgaactttta
gagctcctaaaagcacacaaaaaggccattcgaagagctactgtcaacactttcgggtac
attgcgaaggccatcggccctcatgacgtattggctacgcttttaaacaacctcaaagtt
caggaaaggcagaacagagtttgcaccactgtggccatcgccattgttgctgagacatgc
tcccccttcacagtgctccccgccttaatgaatgagtacagagttcctgaacttaacgtc
caaaacggagtgctgaaatccctgtccttcttgtttgagtacatcggcgaaatggggaaa
gactacatctacgcggtaacgcctttactcgaggacgcgttaatggacagggaccttgtg
cacaggcagacagctagcgcagtggtacaacacatgtcacttggtgtctatggctttggc
tgtgaagactctctgaatcacttactgaactatgtatggccgaatgtgtttgagacatca
ccccacgtgatccaggccgtcatgggagctctggagggcctgagagttgctattggaccc
tgcagaatgttgcagtactgcttacagggtctgtttcacccagctcggaaagtcagagat
gtgtactggaagatttacaactccatctacattggctcccaggacgctctcatagcacat
tacccgaggatctacaacgatgataagaacacctatattcgttacgaacttgactatatc
ttgtaa
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integrated database retrieval system
