KEGG   Microtus oregoni (creeping vole): 121458950
Entry
121458950         CDS       T08307                                 
Name
(RefSeq) collagen alpha-1(III) chain
  KO
K19720  collagen type III alpha
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg04611  Platelet activation
morg04820  Cytoskeleton in muscle cells
morg04926  Relaxin signaling pathway
morg04933  AGE-RAGE signaling pathway in diabetic complications
morg04974  Protein digestion and absorption
morg05146  Amoebiasis
morg05415  Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:morg00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121458950
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    121458950
  09152 Endocrine system
   04926 Relaxin signaling pathway
    121458950
  09154 Digestive system
   04974 Protein digestion and absorption
    121458950
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    121458950
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    121458950
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    121458950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:morg00536]
    121458950
Glycosaminoglycan binding proteins [BR:morg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121458950
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 121458950
NCBI-ProteinID: XP_041524320
LinkDB
Position
Unknown
AA seq 1464 aa
MMSFVQSGAWLLLALLHPTCIWAQQGSVDESGCTHLGQTYESRDVWKPEPCQICVCDAGS
VLCDDIICDDAPLDCPNVEIPFGECCPICPQPTTPAPALPDGHGPRGPKGDPGPPGIPGR
NGDPGNPGLPGPPGSPGSPGICPSCPNGGQNYSPQYDSYDVKSGVGGGMSGYPGPPGPPG
PAGPPGSSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG
ERGLPGPPGAKGPSGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPPGPAG
TNGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGTNGQPG
AAGERGAPGFRGPAGPNGIPGEKGPAGERGGPGPAGPRGVAGEPGRDGAPGGPGMRGVPG
SPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGLPGPAGKNGETGPQGPPGPTGPSGDKGDSGPPGPQGLQGIPGTSGPPGENGKPGEPG
PKGEVGAPGVPGGKGDSGAPGERGPPGVAGSPGPRGGAGPPGPEGGKGPAGPPGLAGATG
PPGLQGMPGERGGPGSPGPKGEKGEPGGAGADGAPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG
AAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGAPG
KDGPPGPAGNSGSPGNPGIAGPKGDAGQPGEKGPPGAQGPPGSPGPLGLAGLTGARGLAG
PPGMPGPRGSPGPQGIKGESGKPGASGHNGERGPPGPQGLPGQPGTAGEPGRDGNPGSDG
QPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGEAGPAGPSGAPGPAG
ARGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGPRG
PVGPHGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGG
GVASLGGGEKSAGFAPYYGDEPMDFKINTEEIMSSLKSVNGQIESLISPDGSRKNPARNC
RDLKFCHPELTSGEYWVDPNQGCKMDAIKVFCNMETGETCINANPMTVPRKNWWTDSAAE
KKHVWFGESMDGGFQFSYGNPDLPEDVLDVQLAYLRLLSSRASQNITYHCKNSIAYMDQA
TGNVKKSLKLMGSNEGEFKAEGNSKFTYTVLEDGCAKHTGEWSKTVFEYRTRKALRLPII
DIAPYDIGGPDQEFGVDVGPVCFL
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgatgagctttgtgcaaagtggggcctggcttctccttgccctgctccatcccacttgc
atttgggcacaacagggcagtgttgatgaatcgggatgcacccaccttggtcagacctat
gagtctagagatgtttggaaaccagagccatgccaaatatgtgtctgcgacgccggatct
gtcctctgcgatgacatcatatgcgatgatgctccgctagactgccccaacgtagagatc
ccgtttggagaatgttgtccaatatgcccacagcctaccacacctgctcctgcccttcct
gatggccatggaccacgaggccccaagggagatccaggccctcctggaattcctgggaga
aatggtgaccccggcaatccagggctaccaggtccccctggctctcctggctctcctgga
atctgtccatcatgtccaaatggcggtcagaattattctccccagtatgactcctacgat
gtcaagtctggagttggaggaggaatgagtggctatcccggaccacctggtcccccaggc
cctgcaggcccccctggctcttctggacatcctggctcccctggttctcctggataccaa
ggtccccctggtgaacctggtcaagctggtcctgccggccctccaggacctcctggtgct
attggtccatctggccctgctggaaaggatggagagtcagggagacctggtcgacctgga
gagcgtggactacctggccctccgggtgctaaaggcccaagcggcatgcctggattccct
gggatgaaagggcacagaggttttgatggacgaaacggagagaagggtgaaacgggtgct
cctggactgaagggtgaaaacggtcttcctggagacaatggagctcctggccccatgggt
cccagaggggctcccggtgagcgaggacgtccaggccttcctggagctgcaggtgctcga
ggcaatgacggtgctcggggcagtgatggacaaccaggtccccctggtcctcctggaacg
gcagggttccctgggtcccccggtgctaagggtgaagttggacctgcagggtcccctggt
tcaaatggctccccaggacaacgaggtgaacctggaccacagggacacgctggtgctcaa
gggcctcctggccctcctgggaataatggcagtcctggcggcaaaggtgaaatgggtccc
gctggcattcctggagctcctggactaatgggagctaggggcccccctggaccagctggg
actaacggcgcacccggacagcgaggtccttcaggtgaacccggcaagaatggtgcaaaa
ggagagccaggtgcccgtggtgaacggggggaagctggatccccaggaatcccagggcct
aagggtgaagatggtaaagatggatcacctggagaacccggtacaaatgggcagccagga
gctgctggagaaaggggagctcctggcttcagaggacctgcagggccaaatggcatccca
ggagaaaagggtcctgctggggaacgtggtggcccaggtcctgcagggccccgaggagta
gctggagaacctggccgagatggagccccaggaggcccaggaatgaggggtgttcccgga
agcccaggaggaccaggcaatgatgggaaaccaggacctcccggaagtcaaggagaaagt
ggccgccctggtcctcctggcccatctggaccccggggtcagcctggtgtcatgggtttt
cctggtcctaaaggaaatgacggtgctcctggcaagaatggagaacggggtggccctgga
ggacccggccttcccggtcctgctggaaagaacggtgaaactggacctcagggcccccca
ggccctactggcccatctggtgacaagggcgattccggaccccctggtccacaaggatta
caaggaatacctggtaccagtggtcctccaggagaaaatggaaagcctggcgaaccaggt
ccaaagggtgaagttggtgcacctggagttcctggaggcaagggtgactccggtgcccct
ggagagcgtggaccacccggagttgcaggaagccctggtcctagaggcggagctggaccc
cctggccccgagggaggaaagggccctgctggtccccctggtctcgctggtgctactggt
ccccctggtctacaagggatgcctggagagagaggaggtcctgggagtcctggtccaaag
ggtgaaaagggtgaacccgggggtgcaggtgctgatggggctccaggaaaggatgggcca
aggggtcctactggtcctattggcccccctggcccagctggtcagcccggagataagggt
gaaggtggtgcccctggacttccgggtatagctggacctcgaggtggccctggcgagaga
ggtgaacatggacctcctggacctgctggcttcccgggagctcctggacagaatggtgaa
ccaggtgctaaaggagaaagaggcgcccctggagagaaaggtgaaggaggccctcctgga
gccgcaggaccccctggaggttccggacccgctggtcctcctggtcctcagggtgtcaag
ggtgaacgtggcagtcctggtggtcctggtgctgctggctttcctggtggtcgtggtctt
cctggtccccctggcaacaatggtaacccaggccccccagggccaagtggagctcctggc
aaggatggccctccagggcctgctgggaacagtggttctcctggcaaccctggaatagcg
ggaccaaaaggtgatgctggccaacctggagagaagggaccacctggtgctcagggacct
ccgggatccccaggcccactcggacttgcgggacttactggagcaagaggtcttgctggg
ccgccaggcatgccgggtcctaggggcagccctgggcctcaaggtatcaagggtgaaagt
ggaaaaccgggagccagtggccataatggggaacgtggtcctcctggaccccaaggtctt
cctggccaacctggtacagctggtgaacctgggagggatggaaacccaggatcagatggt
caaccaggacgagatggatcccctggtggcaagggtgatcgtggtgaaaatggttctcct
ggtgccccaggtgctcctggtcatccaggaccacctggtcctgttggtccagctgggaag
agtggtgaccgaggagaagcgggtcctgctggtccttctggtgctcctggtcctgctgga
gctcggggtgctcctggtccccaaggtccacgaggtgacaaaggtgaaaccggcgagcgt
ggctccaatggcatcaaaggacaccgaggattcccaggcaatccaggtcccccaggttcc
cctggtgctgccggtcaccagggtgcagttggtagtcccggacctgccggtcccagagga
ccagttggaccacatgggcctcctggaaaagatggtacaagcggacatccaggtcccatt
gggccgccaggacctcgaggcaacagaggtgaaagaggatctgagggctcaccaggccac
cctgggcagccagggccccctggacctcctggtgcacctggtccttgctgtggtggagga
ggtgttgcctcccttggaggcggtgaaaagtctgctggatttgcaccctactatggtgat
gaaccaatggatttcaagatcaacaccgaggagattatgtcttccctcaagtctgttaat
ggacaaatagaaagtcttattagtcccgatggttctcgtaaaaacccagcgcggaactgc
agagacctgaaattttgccatcctgaactcacgagcggcgaatattgggtcgatcctaac
cagggttgcaagatggatgctatcaaagtgttctgtaacatggaaaccggggagacgtgc
ataaacgccaacccaatgactgttccacggaagaactggtggacagattctgctgctgag
aagaaacatgtttggtttggagaatctatggatggtggctttcagttcagctatggcaat
cctgaccttcctgaagatgtccttgatgtacaactggcatacctcaggctcctctctagc
agggcctcccagaacattacataccactgcaagaacagtattgcctacatggaccaggcc
actggcaatgtcaagaagtctctaaagctcatgggatcgaatgaaggggaattcaaggcg
gaaggaaacagcaaattcacctacacagtcctggaggatggctgtgcaaaacacaccggg
gaatggagcaaaaccgtctttgaatatcgaacacgcaaggctctgagattacccatcata
gatattgcaccctatgacatcggtggtcctgatcaagaatttggtgtggacgttggccct
gtttgctttttgtaa

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