Microtus oregoni (creeping vole): 121459339
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Entry
121459339 CDS
T08307
Symbol
Zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121459339 (Zc3h13)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
121459339 (Zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Plasmodium_HRP
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
121459339
NCBI-ProteinID:
XP_041524912
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MSKIRRKVTVENTKTISESTSRRPSVFERLGPSTGSTTETQCRNWLKTGSCLYGNTCRFI
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTETQKRSTEESSSPVRKESSRGR
HRDKEDIKIVKERTPESEEEHVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMDKREEIIIQKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKASSAGKKERKAAVV
ASPLLDQQRTSKSNQSKKKGPRTPSPPPPILEDIILGKKYKEKYKVKDRIEEKPRDGKDR
GRDFERQREKRDKPRSSSPGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQR
TLTPSLRRSASPYPTHCLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREETR
GKRDREKETREDRESEHDHRDDREPRDSRDRRDTRDRRELRDSRDIRDSREMRDYGRDTK
ESRDPRDSRSARDVHDYRDREARDTREIRDVRDAREVRDVRDARDARDARDARDVRDVRD
ARDVRDARDVRDARDVREIRDVRETRDARDVRDARDGHRKEDVYQEEARSYGRNHLREES
SRVELRNDSRNESRSEIRNDRMGRSRGRGPELPEKGSRGTRSSQMDSHSSSSNYHDSWET
RSSYPERDRYPERDTRDQARDASFERRHGERDRRDNRERDQRPSSPIRHQGRSEELERDD
RREERRVDRVDERRDERVRDRDRDRERERERERERERDREREKERERELERERARERERE
REKERERERERERDQRDRDHDREREREREREREKEREREREERERERERERERERERERE
RERERAREREKERERQREWEDKDRGRDDRREKREDVREDRSLREGHEERKAKKRYRNEGS
PSPRQSPKRRREHSPDSDTYHSGDDKNEKHRLLSQVVRPQDSRSLSPSHLPEDRQGRWKE
EDRKSERRESSRRYEEQELREKVSSGDRQREPAESVDSSRARAQDLSSHRQPEDRDRDGS
DRAHDEKKKAKAPKKPIKKKKEDDAGLERSNLETSEDAQVFSPKKGQKKKNVEKKRKRSK
GDSDVSDEEAAPQNKKKRGPRTPPLAIKEELLEISTDKDGLLEDSLKKEDTAFSDWSDED
VPDRAEGMEPEHTAATATPGSTPSPLSSLLPPPPPVTAASTAATALASSAVVATSSAIIS
SSASTSSANASEDSHRKCHRTRVEKVEASHVTLEDTPHRKLVDQKRSSSLGSNRSHRSHT
SGRLRSPSNDSAHRSGDDQGSRKRVLHSGSRDREKTKSLEIPGERKSRIDQLKRGEPSRS
TSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERERYEHDRERERDRRDPRQRE
WDREADKEWPRTRDRDRLRERERERDKRRDLDRERERLTTDPVDRDRDRDRTFETSQSES
VKRSEAKLESEHERDLDGSSRDSATMDKERMDRDLGSVQGFEDLSKAERTESLEAGDDES
KLDDAHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQEEEKMPDPLDVIDVDWSGLMP
KHPKEPREPGAALLQFTPGAALLRVGISKKLAGSELFTKVKETCQRLLEKPKDADGLFEH
ELGALNMAALLRKEERASLLSDLGPCCKALCFRRDSAIRKQLVKNEKGTVKQAYTNTPLV
DNELLRLSLRLFKRKTTCQTPGQDKMEDSKLAPSSVQQELCVS
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaggaggaaggtcacagtggaaaacaccaagaccatatctgagagtaca
tccagaagacctagtgtatttgagagacttggacccagcactggcagcacaacagagaca
cagtgccggaactggctgaagactggcagctgcctctatggaaatacttgtaggttcata
catggcccttcacctcgtgggaaaggttacagcagcaattacagaaggtcaccggaaaga
cctacaggtgacctcagggaaagaatgaagaataagcgtcaggatgtggacactgagacc
cagaaacggagcacagaggaatcatcctcacctgttaggaaagaatcttcaagagggaga
cacagagacaaggaagacataaaaattgttaaggagagaactccagaaagcgaagaagaa
catgtggaatgggagactaacagagatgattctgacaatggagatattaattatgattat
gtgcatgagttgtcattggaaatgaagcgtcagaaaatacagagagaattaatgaaattg
gaacaagaaaacatggataaaagagaagaaattatcattcaaaaggaggtttccccagaa
gtggttagatcgaaattgtctccatcgccttctctgagaaaatccagtaaatcgccaaag
cgaaagtcaagccccaaggcatcttcagctggcaagaaagagcggaaggctgctgtggtg
gcttctccactgttggaccagcagaggacttcaaagagcaaccaaagtaaaaagaaaggg
ccacgtactcctagtccacctcctcctatactggaagatatcattctagggaaaaaatac
aaagaaaagtataaagtgaaagacaggatagaagaaaaaccaagagatggaaaggacaga
ggacgggattttgaaaggcaaagagaaaaaagagacaagccaaggtcctcctccccagga
cagcaccattctcctctgtcttctagacatcactcctcctcctcgcagtcaggatcgtct
attcagagacattcaccttctcctcgtcggaaaaggactccctccccatcctaccagcgg
actttaactccttctttacggcgttccgcctctccttacccaacacattgtctgtcttct
cctcagaggaagcagagtcccccaagacatcgctctccaatgagagagaaagggaggcat
gatcatgagcgcacttcacagtcacatgatcggcgtcatgagaggagggaagaaactcga
ggcaaaagggatagagaaaaggaaaccagagaagaccgagagtcagaacatgaccatagg
gatgacagagaacctcgagacagccgggaccggagagatactagagaccgccgggaactg
agagactccagagacatccgggactccagagagatgagggactatggcagagataccaag
gagagccgtgatcccagagattcacggtcagctcgggatgtacatgactacagagaccgt
gaagctcgggatactcgggaaattcgagatgttcgggatgcacgggaagttcgggatgtt
cgggatgctcgtgatgctcgtgatgcccgtgatgctcgcgatgtgcgggatgttcgagat
gctcgggatgttcgagatgctcgggatgttcgagatgctcgggatgttcgggaaatccgg
gatgttcgggaaacccgggatgcacgagatgttcgagatgcacgcgatggtcaccggaag
gaggatgtgtaccaggaagaagcccgcagttatggcagaaaccacctgagagaagagagt
tctcgagttgagctaaggaatgactctagaaatgagtctcgaagtgaaattagaaatgac
aggatgggcagaagtagggggagaggtccagaattgcctgaaaagggaagtcgaggcaca
agaagttcccaaatggatagccacagtagcagcagcaactaccatgacagctgggaaact
cggagcagctatcccgagagagacaggtaccctgagagagacactcgcgatcaagccagg
gatgcttcctttgagagaaggcatggagaaagagaccgtcgggacaaccgggagcgagat
caaagaccaagctcacctattcgacatcagggaaggagtgaggagcttgagcgtgatgac
agaagagaggagcggagagtagacagagtggatgagagaagagatgagcgggttcgagac
agagacagggaccgagagcgagaaagggagcgcgagagagagcgggaacgagatcgggag
cgagaaaaagaaagagaaagagaactagaaagagagcgagctagagagcgggagagagag
agagagaaagagagggagagggagcgagaacgagagcgagatcagagagatcgtgaccat
gatcgagagcgagaaagagagagggaacgggagagggaaaaagaacgggagcgagaaaga
gaagagagagagagggaaagagaacgggaacgggagcgtgagagagaacgagaacgagag
agggagcgagaaagggcaagagaaagagaaaaagagcgagaacggcaaagagaatgggaa
gacaaagacaggggacgcgatgaccgccgggagaagcgcgaggacgtccgggaggaccgg
agcctcagagaaggccacgaggagagaaaagccaagaaacgttacagaaacgaagggagt
cccagcccccggcagtcccccaagcgcaggcgggagcattctcccgacagtgatacctac
cacagtggggatgacaaaaatgaaaaacatagactcttgagccaggtcgtacgaccacaa
gattctcgttctctcagcccatcccacctcccagaagacaggcagggtagatggaaagag
gaggatcgtaaatcagaaaggagggagagttcaaggcgctatgaggagcaagaactcaga
gagaaggtttcttctggtgataggcagagggagccagcagagagcgtggacagctcaaga
gctcgtgcacaagacctcagtagccaccgccagcctgaagaccgcgaccgcgatggatct
gatcgagcccacgatgaaaagaaaaaagcaaaagctccaaagaaacctattaagaagaaa
aaggaggatgatgccggactagagaggagcaaccttgagacatctgaagatgcgcaagta
ttttcacccaaaaaaggacagaagaagaaaaacgttgagaaaaagcgtaaaagatccaaa
ggtgattctgatgtctctgatgaagaggcagccccacagaacaagaagaagagaggcccg
cgcacgccccctctggccatcaaggaggaactgcttgagatttccaccgacaaggatggt
ctgctcgaggactcgctgaagaaagaagatacagcctttagtgactggtcggatgaggat
gtgcctgaccgtgcagagggcatggaacctgaacacactgcagccactgctactcctggc
agtaccccttccccactctcgtctcttctccctcccccacctcccgtgactgctgccagt
actgcagccactgctcttgcctcctcggctgttgttgctacctcctctgccattatttcc
agctctgcctccacctccagtgccaatgccagtgaagactcacatagaaagtgccatagg
acacgagtggagaaagtggaagcatctcatgtgaccctagaagatacaccacatcgcaag
ctggtggatcagaagaggagcagcagccttgggagcaaccgaagtcaccgtagccacacc
tctggtcgcctgcgctccccatctaatgattctgcccatcgaagtggggatgaccagggc
agtcggaaaagagtgctgcacagtggctccagagacagagaaaaaacaaaaagcctggaa
atcccgggagaaagaaaatctaggattgatcagttaaagcgtggagaacccagccgaagt
acttcttcagatcgccaggattccagaagccacagctcaagaagaagctcccctgagtca
gatcgccaggttcattcaaggtctgggtcatttgacagccgagacaggcttcaagagcga
gagaggtatgagcatgaccgagaacgggagagggaccggagagacccgaggcagagggaa
tgggaccgggaagctgataaagagtggccacgaacccgagaccgagatcgactgcgggaa
cgagaaagagagcgagacaaaaggagagatttggacagagaaagagagagactgaccact
gaccctgtggacagggacagagaccgagatagaacttttgagacttctcagtcagaatct
gttaagcgcagtgaagccaaactggagagcgagcacgaaagagaccttgacggcagttcc
cgggactcagcaaccatggataaagaaaggatggatagagacctggggtctgtgcagggg
tttgaagacttgagtaaagctgagcggacagagagtctggaagcaggagatgacgagtcc
aagttagatgatgcacattcgttaggctctggtgctggggaaggatatgaacccatcagt
gatgatgaactagatgaaattctcgccggggatgcagaaaagagagaggaccaacaggaa
gaggagaagatgccagatcctttagatgtgatagacgtggattggtctggacttatgcca
aagcatcccaaagaaccgagagagccgggggctgcgctcttacagttcacacctggagct
gctctgctgcgagttgggatctctaagaagttggcaggttctgagctatttactaaagtt
aaggaaacatgtcaacgacttctagaaaaaccaaaagatgcagacggccttttcgagcat
gaactaggggctctcaacatggctgccttactgcgaaaagaagagcgagcgagtctcctt
agtgacctgggaccgtgctgtaaagcattatgtttcagacgggattctgcgatccggaag
cagcttgtgaagaacgaaaagggaactgtgaagcaggcgtacacaaacactccgctggta
gacaacgagctgcttcggctgagtcttcggttatttaagaggaagaccacttgtcaaacc
cctggacaagacaagatggaagacagtaaattagcaccgtccagtgtccagcaggagctg
tgcgtgtcctag
DBGET
integrated database retrieval system
