Microtus oregoni (creeping vole): 121459898
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Entry
121459898 CDS
T08307
Symbol
Ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
morg03009
]
121459898 (Ddx56)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121459898 (Ddx56)
Ribosome biogenesis [BR:
morg03009
]
Eukaryotic type
Pre-60S particles
Helicases
121459898 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
121459898
NCBI-ProteinID:
XP_041525918
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MEDQEELGFEHMGLDPRLLQAVADLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQLLLHKKATGPVMEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDVRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRILNHLQQDSLKLRDSLELLVIDEADLLFSFGFEDEL
KSLLCHLPRIYQAFLMSATFNDDVQALKELVLHNPVTLKLQESQLPGPEQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKALLFVNTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHI
ISQFNQGFYDCVIATDAEILGPPVKGKRRGRGAKGDNTSDPESGVARGIDFHHVSAVLNF
DLPPTPEAYVHRAGRTARANNPGIVLTFVLPTERSCLGKIEALLSGEGEAPILLPYQFQM
EEIESFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGNVPDYLVPAALRGLVQPRKKRRKLPSSKKTKKVKTRNPLRDFKHRGKKPK
PTAKPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaagaagagctaggttttgaacacatggggctggatccccggctcctgcag
gctgtcgctgacttgggctggtcgcgacctacgctgatccaggaaaaggccatacctctg
gctctggaggggaaggacctcctggcccgcgcccgcacaggctccgggaagacggcagcg
tatgctattccgatgctgcagttgcttctccacaagaaggcgacaggtcctgtaatggaa
caagctgtgagaggccttgtccttgttcctacgaaggagctggcgcggcaggcccagtca
atgattcagcagctggctgcctactgtgctcgggatgtgcgagtggctaatgtctcagct
gctgaagattccgcttctcagagagctgtgttgatggagaagccagatgtggtggtgggg
accccatcccgaatattaaaccacttacagcaagacagcttgaagctccgtgactccctg
gagctgctggtgatagacgaagctgaccttctcttttcctttggctttgaggatgaactc
aagagtcttctctgtcacttgcctcggatttaccaggcctttctcatgtcggccactttc
aatgatgacgtacaagctctgaaggagctggtactacataacccggttaccctcaagtta
caggagtcccagctgccggggccagagcagctgcagcagtttcaggtggtttgtgagacg
gaagaagacaaattcttgctgctgtatgccctgctcaagctctcgctgattcggggcaaa
gccttgctctttgtcaacactctggagaggggttaccgactgcggctcttcctggaacag
ttcagcattccgtcctgcgtgctcaatggagagctcccgctgcgctccaggtgccacatc
atctcacagttcaaccagggcttctatgattgtgtcatagcaacagatgctgaaatcctg
ggaccaccagtcaaaggcaagcggcgaggccgaggagccaaaggagacaacacctctgat
ccagagtcaggtgtggcccggggcatagacttccaccatgtatctgcggtactcaacttt
gatctccctcccactccagaagcctatgttcatcgagctggcaggacagctcgagccaac
aacccaggcatagttctgacctttgtgctgcccacagaacggtcttgcttgggaaagatt
gaggcgcttctcagtggagagggcgaggctcccatcctgcttccctaccagttccagatg
gaggagattgaaagctttcgctatcgctgcagggatgccatgcgctcagtgaccaaacag
gccattcgagaggcgagactgaaggagatcaaggaggaacttctacactcagagaagctc
aagacatactttgaagacaatcccagggatctccagctgctacgccatgatctgcccctg
catcctgcggtggtaaagcctcatctgggcaatgtccctgactacttggttcctgctgct
cttcgtggccttgtacaacctcggaagaaacggagaaagctgccctcctctaagaagact
aagaaggtgaagactcggaacccactgcgtgacttcaagcacagggggaagaaacctaaa
cccacagcgaagccctcttga
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