Microtus oregoni (creeping vole): 121460003
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Entry
121460003 CDS
T08307
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121460003 (Rbm39)
Spliceosome [BR:
morg03041
]
Common components
Common spliceosomal components
General mRNP proteins
121460003 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
121460003
NCBI-ProteinID:
XP_041526027
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaatggccacgaagaacgtagcaaaaagagaaaaaaaagcaagagc
cgaagtcgtagtcatgagcgaaagagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgggaacgaaagcgaagtagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaaggcgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggagagggatgcaaggacagttttctgcatgcagctg
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcctatgtggaa
tttgttgatgttagctcagtgcctctagcaattggattaactggtcaacgtgttttagga
gtgcccattatagtacaggcatcacaggcagaaaaaaatcgagctgctgcaatggctaac
aatttacaaaagggaagtgctggacctatgaggctttatgtgggatcattacactttaac
ataactgaagatatgcttcgggggatctttgagccttttggaaggattgaaagtattcaa
ctcatgatggatagtgaaacgggtcgatctaagggatatggattcattacattttctgat
tcagaatgtgccaaaaaagctttggaacagcttaatggattcgaactagctgggagacca
atgaaagttggtcacgttactgaacgaactgatgcttctagtgctagttcatttttggac
agtgatgaacttgaaaggactggaattgatttgggaacaactgggcgtctccaattaatg
gctagacttgcagagggtacaggtttgcagattccaccagcagcacagcaagcattacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcctcagctttagctgcagctgcatctgttcaacca
cttgcaacacaatgtttccagctttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattctgctcagggcaatgtgtatgtgaagtgcccatct
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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