Microtus oregoni (creeping vole): 121460174
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Entry
121460174 CDS
T08307
Symbol
Vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04140
Autophagy - animal
morg04148
Efferocytosis
morg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121460174 (Vps16)
04148 Efferocytosis
121460174 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121460174 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
morg04131
]
121460174 (Vps16)
Membrane trafficking [BR:
morg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121460174 (Vps16)
Hops complex
121460174 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121460174
NCBI-ProteinID:
XP_041526331
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELKDCLVAAAPYGGPIALLRNCWRKEKAA
SMRPVLEIYSASGMSLATLLWKSGPVVALGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAYRFTLSANVGDLKLRRMPEVPSLQSAPSCW
TTLCHDRVAHILLAVGPDLYLLDHATCSTVTPAGLAPGVSSFLQMAVSFTYRYLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLIQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVATLIRGGHNKRAEQLARDFR
IPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNETELSLVLSHCTGAADGATADKIQRARAQVQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacagcgaattggaacccactcggggactctgccttttaccggaaatat
gaactgtacagcatggactgggacctgaaggaggaactcaaggattgcttggtggctgct
gctccctatggaggtcccattgctctgctacggaactgttggagaaaagagaaagctgcc
agcatgcgaccagtactggagatctactctgcctctggcatgtcactggccaccctgctg
tggaagagcgggcctgtggtggccctcggctggtcagcggaggaggagctgctctgtgta
caagaagatggtgcagtgttagtttacgggcttcatggagacttccggaggcacttcagc
atgggcaatgaggtgcttcagaaccgagtcctggatgcccggatctttcatactgagttt
ggttctggggtggccatcctcacaggggcctatcgctttaccctgagtgccaatgtgggt
gacctcaaactccgtcggatgccagaggtgccaagtctacaaagtgcaccctcatgttgg
accacactgtgccacgaccgagtggcacacattcttctggctgtagggcctgatctttac
ctcctggatcatgccacctgctccacagtgacacctgctggcttagccccaggagtgagc
agcttcctacagatggctgtatccttcacatatcgttacctggcactcttcacagacaca
ggctacatctggatggggacagcgtcactcaaggagaagctgtgcgagttcaactgcaac
atccgggcacccccaaagcagatggtctggtgtagccgtcctcgaagcaaggaaagagct
gttgtggtggcctgggagagacggctaatggtggtgggcaatgcgcctgaaagcattcag
tttgtgctagatgaggactcctacttagtgccggaacttgatggggtccgcatcttctcc
cgcagcacccatgaattcctacatgaagtcccagtggccagcgaagagatcttcaaaatt
gcctcaatggcccctggagcactactgttggaggcccagaaggaatatgagaaagagagc
cagaaagcagatgagtacctacgggagatccaggagctggggcaactcatccaggctgtg
cagcagtgcattgaagctgcaggacatgagcaccagccggacatgcaaaagagtctgctc
agggcagcttcctttggaaagtgtttccttgacagatttccgcctgacagttttgtgcgc
atgtgtcaggacctgcgagtgctcaatgctattagggactaccacattgggatccctctg
acctatagccaatataagcagctcaccatccaggtgctgttggacaggcttgtattgcgg
aggctttaccccctagctattcagatatgcgagtacctgcgccttcctgaagtacagggt
gtcagcaggatcctagcccactgggcctgctacaaggtgcagcagaaagatgtctcagat
gaggatgtagcacgggcaattaatcagaagctgggtgacacgcctggtgtttcatattct
gacattgctgcacgagcctatggctgtggtcgcactgaactagccatcaagctactggag
tatgagccacgatcaggggagcaggtacctcttctcctaaagatgaagaggagcaaacta
gcactgagcaaggccattgagagtggggacactgacctggtgtttacagtgttgctgcac
ctaaagaatgaactaaatcgaggagactttttcatgactctccggaaccaacccatggcc
ctgagtttgtatcgacagttctgtaagcatcaggagctagacactctgaaggacctttac
aatcaagacgacaatcaccaggagttgggcagcttccacatccgagccagctatgctgct
gaagagagaattgaggggcgagtagcagctctgcagacagcagctgatgccttctacaag
gccaagaatgaatttgcagccaaggccacagaggatcaaatgaggctcctccgactacag
cggcgtctagaagatgagctggggggccagttcctagacctgtctctgcatgacacagtt
gccactcttatccgtggaggccacaacaagcgtgcagagcagctggctcgtgattttcga
atccctgacaagaggctctggtggctaaagctggctgccctggcagatctggaagattgg
gaggagctggagaagttttccaagagcaagaaatcaccgattggctacctgccctttgta
gagatctgcatgaaacagcataacaagtatgaggccaagaagtacgcgtcccgtgtgggc
cctgagcagaaggtcaaggctctgctccttgtcggggatgtggctcaggctgcagatgtg
gccattgagcaccggaatgaaacggagctgagcctggttttgtcccactgcaccggagct
gcagatggggccacagctgacaagattcagcgggccagagcacaagtccagaagaagtga
DBGET
integrated database retrieval system
