Microtus oregoni (creeping vole): 121460310
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Entry
121460310 CDS
T08307
Symbol
Xrn2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03008
Ribosome biogenesis in eukaryotes
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121460310 (Xrn2)
09123 Folding, sorting and degradation
03018 RNA degradation
121460310 (Xrn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121460310 (Xrn2)
03019 Messenger RNA biogenesis [BR:
morg03019
]
121460310 (Xrn2)
03009 Ribosome biogenesis [BR:
morg03009
]
121460310 (Xrn2)
03016 Transfer RNA biogenesis [BR:
morg03016
]
121460310 (Xrn2)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121460310 (Xrn2)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
121460310 (Xrn2)
Ribosome biogenesis [BR:
morg03009
]
Eukaryotic type
Pre-60S particles
RNases
121460310 (Xrn2)
Transfer RNA biogenesis [BR:
morg03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
121460310 (Xrn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
121460310
NCBI-ProteinID:
XP_041526578
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAIEKQRVREEILAKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPGGILTPHALGSRNSPGCQVASNPRHAAYEMRMHSNSSPSVSPNTSF
ASDGSPSPLAGIKRKAEDSDSEPEPEDNIRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEENRRNSLGSDVLFVGKLHPLRDFILELYQTGSTEPVDVPPELCHGIQG
KFSLDEEAILPDQTVCSPVPMLRDLTQNTSVSINFKDPQFAEDYVFKAVMLPGARKPAAV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGVYNNNAPPPAA
YQGSLHRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRSVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPRDGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttcttccgctggctcagccgcaagtatccgtccatcattgtcaac
tgcgtggaggagaagccaaaagaatgcaatggtgtaaagattccagttgacgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagaagacttctctatatg
gcaatagatggagtggcaccacgtgccaaaatgaaccaacagcgttcaaggaggtttaga
gcatcaaaggaaggaatggaagcagcaattgagaaacagcgagtcagagaagaaatactt
gcaaaaggtggctttcttcctccagaagaagtaaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttatattatctgatgctagtgca
cctggtgaaggagaacacaaaatcatggattacattagaagacaaagagctcagcctaac
catgacccaaatacgcatcattgtttgtgtggtgctgatgctgatcttattatgcttggt
cttgctacacatgaacctaacttcaccataatcagagaagaattcaagccaaacaaaccc
aaaccatgtgctctttgtaatcagtttggacatgaggtcaaggattgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggggag
tttatcttccttcggctgaatgttcttcgagagtatctggaaagagaactcaccatggcc
agcttaccattcccatttgatgtggagaggagcattgatgactgggtgttcatgtgcttc
tttgtgggcaatgatttccttcctcacttgccgtcactagagattagggaaggtgctatt
gatcgtttggttaacatatacaaaaacgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctacaaagagtacagatgatcatgttagcagttggtgaagttgaa
gatagcatttttaaaaagagaaaagatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagaggatgaagagagatcaaccagcttttactcctggtggaatattaacacct
catgccttgggttcaagaaattccccaggttgtcaagtagccagtaatccaagacacgcg
gcctatgagatgaggatgcatagtaactctagtccctcagtatctcctaatacaagtttt
gcatctgatggctccccatctccactagcaggaattaagagaaaagcagaagacagtgac
agtgagccagagccagaggataacatcaggttatgggaggctggttggaagcagcgatac
tacaagaacaaatttgatgtagatgcagctgatgagaaattccggcgtaaggttgttcag
tcttatgttgaaggactgtgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcctcagactttgaaggtattgcagac
atgtcttctgaatttgagaagggcacaaaaccgtttaaaccattggagcaactcatggga
gtctttccagctgcgagtggtaactttctacccccatcatggcggaagctcatgagtgac
cctgattctagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctattgccatttgtggatgaacgaaggctgcgagct
gccctagaagaagtgtacccagacctcactccagaagagaacaggagaaatagtcttgga
agtgatgttttgtttgtggggaaacttcatccactacgtgacttcattttagagctgtat
cagacaggttccacagagccagtagatgtgccacctgaattgtgtcacgggattcaagga
aagttttctttggatgaagaagccattcttccagatcaaacagtatgttcccctgtgccc
atgttacgggacctgacacagaacacttcagtcagtattaattttaaagatccacagttt
gctgaagattatgtttttaaagctgtaatgcttccaggagcgaggaagccagcagcagtt
ttgaaacctggtgactgggaaaaatccagcaatgggcggcagtggaaaccccagcttggc
tttaatcgggaccggcggcctgttcacctggaccaggcagcttttagaactttaggacat
gttatgccaagaggctcggggactggtgtttacaacaacaatgcaccaccacctgcagct
taccagggcagcttacacaggccactgttgagagggcaagctcagattccaaaacttatg
tcaaatatgaggccccaagattcctggcgaggtcctcctcctcttttccagcagcagaga
tttgacagaagtgtcggagctgaacctctgctgccgtggaaccggatgctccaaacccaa
aatgcagcttttcagccaaaccagtaccagatgctggctgggcctggaggatatccaccc
agacgtgatgatcgaggagggagacagggatatcccagagatggaaggaaataccctttg
ccaccaccctcaggaagatacagttggaattag
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