Microtus oregoni (creeping vole): 121460780
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Entry
121460780 CDS
T08307
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03013
Nucleocytoplasmic transport
morg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121460780 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121460780 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121460780 (Nup54)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121460780 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
121460780
NCBI-ProteinID:
XP_041527286
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MAFNFGAPSGTSGTSAATAAPAGFGGLETANSTAGGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLTSAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTG
FGTATGTGTGLGTGLGTGLGFGGFNTQPQQQQQQTTLGGLFSQPTQAPAQSNQLINTASA
LSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPN
NKDEDGLVVLVFNKKEADIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIY
VVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAG
VDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQK
NQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNA
PTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKD
DLEDIKLVEHGLNETIHSRGGVFS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggctccttcgggcacttctggcacctctgcagctaccgcggca
cccgcgggatttggtgggcttgagactgccaactccaccgccggtgggtttaattttggg
ggtttcggattaactgctaaccctgcagtgaactttaatattgggaatttcggtgtttct
accacctcggcgactccgttcaattttggtaacagtctgacgagtgcaggtgggtttgga
ggatttggaacaacaactacaactgcgggctctgcattcagcttctctgccccaacaaac
actggcagcacaggccttctcggtggcactcagaacaaaggttttggcttcggtactggt
tttggcacagcgacgggaactggtactggtttaggtactggtttgggaaccggcctgggg
tttggaggatttaatacgcagccgcaacagcagcagcagcaaactactttaggtggtctc
ttcagtcagcctacacaggctcctgcgcagtccaaccagctcatcaatactgccagtgcg
ctttctgctccgacattgctgggggatgagagagatgccattttggctaaatggaaccag
cttcaggctttctggggaacaggaaaaggatatttcaacaataacattcctcccgtggag
tttacacaggaaaatcccttctgccgatttaaggctgtaggttatagttgtatgcccaat
aataaagatgaagatggactggtggttttagttttcaacaagaaagaagcagacattaga
agccagcagcagcagctagtagaatcattgcataaggttttgggaggaaaccagaccctg
actgtcaatgtggagggcattaagaccctgccggatgatcagacagaagttgtcatttac
gttgttgagcgttctccaaatggcacctcgagaagagtcccagccacaacgctgtatgcc
cactttgaacaagccaacatcaaaacacagctgcagcagctcggggtgacgctttctatg
accagaacagagctgtcccctgctcagatcaaacagctcctgcagaaccctcctgctggt
gttgatcctattatttgggaacaagccaaggtggataaccccgattctgaaaaattaatt
cctgtacccatggtgggtttcaaagagctgcttcggagactgaaggttcaagaccagatg
actaagcagcatcagaccagattagatatcatatctgaagatattagtgagctacaaaag
aatcaaactaccactatggccaagatagcacagtacaagcggaagctcatggacctctcc
cacagaaccttacaggtcctaatcaaacaggagattcaaaggaagagcggctacgccatc
caggctgatgaagagcagctgcgggttcagctagacactattcagggcgaactgaatgcc
cctactcagttcaaaggtcgactaaatgaactgatgtcccagatcaggatgcagaatcac
tttggagctgtgaagtctgaagaaaggtattacatagatgcggacctcttacgagaaatc
aagcagcatttgaaacaacaacaggaaggccttagccacttgattagcatcataaaagat
gacctagaagatataaaactagtagaacatggattgaatgaaaccatccacagcagaggt
ggtgtctttagctga
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integrated database retrieval system