Microtus oregoni (creeping vole): 121461748
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Entry
121461748 CDS
T08307
Symbol
Pcdh9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121461748 (Pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
morg01009
]
121461748 (Pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
morg04515
]
121461748 (Pcdh9)
Protein phosphatases and associated proteins [BR:
morg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121461748 (Pcdh9)
Cell adhesion molecules [BR:
morg04515
]
Cadherins
Protocadherins
121461748 (Pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
121461748
NCBI-ProteinID:
XP_041528938
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDED
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHNKSD
TIPVTHQQCPSSTDFHIRENEESHSESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDTNRNQFNDRKQYGS
NEGHFNNGSHMADIPLANLKSYKQAGGTIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttatctgttggctgctctgattgcctgtttaaggctggattcg
gctatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaatataccaaaggacttgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctctggtgaaagtatccagc
agcactggggagattttcacaacctccaatagaatagacagagagaaactctgcgccgga
gcttcttatgcggaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gactttttcaggctgatcaaaatcaagatcattgtcaaggataccaatgataatgccccc
atgtttccgtctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaatcccatcagccacagaccctgacacaggcttcaatggggtgcagcattatgaa
ttgctaaatgggcagagtgtttttggcctggatatcgtggaaactccagagggagaaaag
tggccgcaattgattgttcagcagaacttggacagagaacaaaaagatacctatgtgatg
aaaatcaaagtggaggatggtggcactccacagaaatccagcacagccatactgcaggtc
actgtaagtgatgtgaatgacaacaggccagtgtttaaagagggtcaagtagaggtgcat
attcccgagaatgctcctgtggggacctctgtgattcagctccatgcaactgatgcagat
gtgggcagcaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataacacaactgggctgattacagttcagaggtctttagatagg
gaagagacagccattcacaaagtgacggtgttggctagtgatggcagttccactcctgcc
agagccacagtgaccatcaatgtcaccgatgtaaatgataaccctccgaacatagacctc
aggtacattataagtcccatcaatggcacggtgtatctatctgagaaagacccagtcaat
acaaagattgccctgattacagtttcagacaaggacacagatgtgaatggcaaagtgatc
tgtttcattgaaagagaggtcccgtttcatctgaaggcagtgtatgacaaccagtatctg
ctagagacttcttctctgctggactatgagggcaccaaagaattcagctttaaaatcgtt
gcctctgattctgggaagcccagtttgaatcagactgccctggtaagggttaagctggag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtctctgaa
aacaaccgacgtgggttatacttaacaactattagtgctacagacgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggacagaaag
acaggagttttgacagcctctagagtatttaacagggaggaacaagagcgattcattttt
acagtcactgccagggacaatgggacccctcccctccaaagccaagcagcagtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcagtttttt
gtgtcggagaatctgccaaagtatagtactgtgggagtaatcacagtgacagatgaagac
gccggagagaataaagctgtgactctttccattctaaatgacaatgaaaatttcgtgttg
gatccctattcgggagtcataaagtcaaatgtctcctttgaccgagagcagcagagttcc
tacacgtttgatgtcaaagccactgatggaggacagccacctcggtcctctacagcgaaa
gtaaccatcaatgtcatggatgtcaatgacaacagtccagttgtcatttctccaccatcc
aacacctcatttaagttggtgcccctctcagccattcctggttccgtggttgccgaagtt
tttgctgtggatattgatactggcatgaatgcagaacttaagtacaccatagtgagcggg
aacaataaaggattgtttcggattgatccagtaacgggcaatatcactctagaagagaag
ccagcacctactgatgtgggcctgcaccgcctggtggtcaacataagtgacctggggtac
cctaaggctttgcacactctcgtgctcgtatttctttatgtaaacgatactgctggaaat
gcctcgtatatctatgacttgatccgcaggactatggagaccccactggacaggaacata
ggagatagtagccaaccctaccaaaacgaggactatctcaccatcatgattgccatcgtc
gcgggggccatggtggtcatcgttgtgatctttgtcactgttctggtgcgctgtcgccac
gcgtcgaggttcaaagcagctcagaggagcaagcaaggtgctgagtggatgtccccaaac
caagagaataaacaaaacaagaaaaagaaacggaagaaaagaaagtcccccaagagttct
cttttgaactttgttactatcgaagagtccaaacccgatgatgcagttcatgaacctatc
aatgggaccatcagcctgcctgctgagctggaggaacaaagtataggacgatttgactgg
ggccccgcacctccgaccaccttcaagcctaacagtcctgacctggccaagcactacaaa
tctgcctccccacagcctgcttttcatctcaaaccagacactccagtatccgtgaaaaag
caccatgtcattcaggagctccctttggacaacacctttgttgggggctgtgacaccctt
tccaaacgctcctccactagttcagatcacttcagtgcctcagagtgcagctcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacaacaaaagtgac
actatccctgtcacacatcagcaatgcccaagctctactgatttccacattcgagagaat
gaagaaagtcattccgagtctcagcgccgtgttacctttcacctcccggacggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaagcctctccggac
aagaggaccgaagcagatggcaactcggaccccaactctgatggacctctgggtccccga
ggattagctgaagctacggagatgtgcactcaagagtgtctggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacacccgaaatctcctctgtcgacc
tttgcaccccagaaagaatgggtcaagaaagacaagcttgtgaatgggcacaccctgacc
agagcatggaaagaagacaccaacaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcaacaatggcagccacatggcagacattcctctggcaaatctgaag
tcctataagcaagcaggtggcacaattgagagtcctaaggagcaccaactttaa
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integrated database retrieval system
