KEGG   Microtus oregoni (creeping vole): 121462266
Entry
121462266         CDS       T08307                                 
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg04151  PI3K-Akt signaling pathway
morg04382  Cornified envelope formation
morg04510  Focal adhesion
morg04512  ECM-receptor interaction
morg04518  Integrin signaling
morg04820  Cytoskeleton in muscle cells
morg04926  Relaxin signaling pathway
morg04933  AGE-RAGE signaling pathway in diabetic complications
morg04974  Protein digestion and absorption
morg05146  Amoebiasis
morg05165  Human papillomavirus infection
morg05200  Pathways in cancer
morg05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:morg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121462266 (Col4a1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121462266 (Col4a1)
   04518 Integrin signaling
    121462266 (Col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121462266 (Col4a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121462266 (Col4a1)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    121462266 (Col4a1)
  09154 Digestive system
   04974 Protein digestion and absorption
    121462266 (Col4a1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    121462266 (Col4a1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121462266 (Col4a1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    121462266 (Col4a1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    121462266 (Col4a1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    121462266 (Col4a1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    121462266 (Col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:morg04147]
    121462266 (Col4a1)
   00536 Glycosaminoglycan binding proteins [BR:morg00536]
    121462266 (Col4a1)
Exosome [BR:morg04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121462266 (Col4a1)
Glycosaminoglycan binding proteins [BR:morg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121462266 (Col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121462266
NCBI-ProteinID: XP_041529695
LinkDB
Position
Unknown
AA seq 1671 aa
MGPRFSFWLLLLPAALLLHEERSRAAAKGDYGCGGSGCGKCDCHGVKGQKGERGFPGLQG
VIGFPGMQGPEGPHGPPGQKGDTGEPGLPGTKGTRGPPGIAGYPGNPGLPGIPGQDGPPG
PPGIPGCNGTKGERGPLGPPGLPGFTGSPGPQGSPGIKGDPGEIIGHIPGIPLKGERGFP
GAPGTPGPPGVPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGASSQGPKGDKGEQGISG
PPGIPGQAQVKEKGEFAPTGEKGQKGEPGFQGAPGYGEKGEPGKPGPRGKPGKDGEKGEK
GSPGFPGDSGYPGLPGEPGPQGEKGEAGLPGPPGSVIGTMPLGEKGERGYPGTPGLRGEP
GPKGYPGIQGQPGPPGFSVPGQTGAPGFPGERGQKGDQGFPGVSLPGPSGRDGTPGPPGP
PGPPGQPGHTNGIVECQPGPPGDQGPPGVPGQPGLTGEVGQKGEKGEGCLTCDTEGLRGP
PGPQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIFFDIR
LKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGLVGLKGDRGPPGGVGFPGSRG
DIGPPGPPGIGSIGPIGEKGNAGFPGNPGSPGLPGPKGEAGKVVPLPGPPGAAGLPGSPG
FPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGPPGPKGVDGLPGDIGQPGSPGRPGF
NGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGNIGGPGVPGEQGSIGPPGLQ
GIRGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDM
PGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGLPGFPGSKGEMGVMGTPGQPGSPGPAGT
PGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQ
IGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGAPGLPGPKGSVGGMGM
PGLPGQKGVPGIPGQQGVPGSPGEKGAKGEKGQTGLPGIGIPGPPGHKGDQGHAGFPGSP
GEKGEKGSAGTPGMPGSPGPRGSPGSIGHPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLP
GTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGNKGDKGSKGEVGFPGLAG
SPGIPGAKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPPGF
PGLNGPKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQ
KGLPGLQGVKGDQGDQGIPGPKGLQGSPGPPGPYTVIKGEPGLPGPEGPPGLKGLQGPPG
PKGQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGPMGPPG
TPSVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFS
TMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVM
AVHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHG
RGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq 5016 nt   +upstreamnt  +downstreamnt
atggggccccggttcagcttctggcttctgctgctgcccgccgcccttctgctccacgag
gagcgcagccgggccgctgcgaagggtgactacggctgtggcggctctggctgtgggaaa
tgtgattgtcatggcgtcaagggacaaaagggagaaagaggctttccagggttacaaggt
gtcattgggtttcctgggatgcaaggacccgaggggccacatggaccaccaggacaaaag
ggtgatactggagaacctggacttcctggtacaaaagggacaagaggacctcctggaata
gctggctaccctgggaaccccgggcttcctggtattcctggccaagatggtccgccaggt
cctccaggtatcccaggatgcaacggtacaaagggagagagaggtccgcttggtcctcct
ggcttgcctggattcaccgggagtcccggaccacaggggtcgccaggaataaagggagac
cctggtgaaattatcggccacatccctggaatacctttgaaaggggaaagaggattccct
ggtgcccctggcacgccaggcccaccaggagtgccaggactccagggacctgttggtcct
ccaggatttaccgggccaccgggtcccccaggccctcctggcccccctggagaaaagggg
cagatgggcgccagctcccaaggaccaaaaggtgacaagggtgagcaggggatcagtggt
cctcctggaatacctggacaggcacaagttaaagaaaaaggagaatttgccccaacagga
gaaaagggtcagaaaggtgaacctggattccagggagccccagggtatggagagaaaggt
gaaccgggcaagccagggccacggggaaagcctggaaaagatggcgagaagggagaaaag
gggagtccgggctttcctggtgattccgggtacccaggactcccaggcgagccgggccct
cagggagagaagggtgaagctggacttccaggccctcctggatctgtgataggcaccatg
ccgttgggagagaaaggggagcgaggctaccccggaacaccaggattgagaggagagcca
ggccctaaaggttaccctggaatacaaggccagccaggccctccaggcttctccgttcca
ggccagactggtgctcctggcttcccaggcgaaagaggacaaaaaggtgaccagggattt
ccaggcgtgtctttaccaggacctagtggaagagatggaactccagggcctcccggccct
cctggaccccctggacagccaggccacacaaatggcattgtggaatgccagcctggacct
cctggggaccagggtcctcccggggtaccaggacagcccggtttgacaggcgaagttgga
cagaaaggtgagaaaggagaaggctgccttacttgtgacacagaaggactccgaggccct
cctggaccacaagggcccccaggagagattggtttccccggacagccaggggccaaaggt
gaccgtggtctgcctggcagggatggtcttgaaggattgccgggtccacaaggtgcaccg
gggctcatgggccagcctggagctaagggagaacctggcgagatattttttgacatacga
ctcaaaggtgacaaaggagacccaggttttccaggacaaccaggcatgccaggaagagcg
ggaacccctggaagagatggccacccagggcttcctggacccaaaggctccccgggtttg
gtaggattgaaaggagatcgaggtccccctggaggagttggcttccccggcagtcgtggt
gacatcggcccccctggtcccccaggaatcggttccattggtcccattggtgaaaaagga
aatgcaggctttcctggaaacccagggtccccaggccttccaggtccaaagggtgaagcg
ggaaaggttgtcccactccctggcccccctggagctgcaggccttccaggatcccctggg
ttcccagggccacaaggtgaccgtggcttcccaggaaccccaggacggccaggcatcccg
ggagagaagggtgctgtgggccagccagggattggatttcccgggcctccaggccccaaa
ggtgttgatggcttgcctggagatatagggcagcctgggagtccaggtcgccccggattt
aatggcttacctggcaacccaggaccacaaggccaaaagggagaacctggcattgggcta
ccaggactcaaagggcagccaggcctcccaggcattcctggtacacctggagagaagggc
aacatcgggggaccaggtgtccctggagagcaaggatccatcggcccccctggactccag
ggaatcagaggtgacccaggacctcctggagttcaaggccctgcgggtccaccaggggtt
ccaggaataggaccacccggagccatgggccctcccggaggacagggacctccagggtca
tcaggtccacctggagtcaaaggagagaagggtttccctgggttcccaggactggacatg
cccggccccaaaggagataaaggctctcaaggacttcctggcctcacgggacagtcaggg
ctccctggcctccctgggcagcaggggactcctggattaccaggattcccaggttctaaa
ggtgaaatgggtgtcatgggaaccccaggacaaccaggctcaccaggaccagctggcacc
ccagggttgcctggagagaaaggggaccatggcctgccaggctcttcaggacccagggga
gaccctggcttcaaaggtgataagggggatgttgggcttcccggcatgccaggatctatg
gagcacgtggacatgggcagcatgaagggacagaaaggagaccaaggagagaaaggacaa
attggacccactggtgataaaggttcccgaggagatcctggaacaccaggagtgcctggg
aaagacgggcaggcggggcatcctggacaaccaggacctaaaggtgacccaggtcttagt
ggaacaccaggagcccctggcctccctggacccaaaggatccgttggaggaatgggcatg
ccaggtttacccggacaaaaaggtgtgcccggcatccccggccaacagggcgtccctggt
tcacctggagagaaaggagccaaaggagagaaaggacagacaggtctacctggcattggg
attcccgggccgcccggccacaagggagaccagggacatgcgggtttcccaggcagccct
ggcgagaagggagagaaaggcagcgccggaaccccagggatgccagggtccccaggccca
agggggtctccagggagcattggccatccaggaagcccaggcctgcctggagagaaggga
gacaaaggcctcccaggattggatggcgttcctggcgtcaaaggagaagcaggtctccct
gggactcccggtcctacaggtccagctggccagaagggagagcctggcagcgatggcatc
cccgggtcagcgggagagaagggcgagccaggtcttcccggaagaggcttcccaggattc
ccagggaacaaaggagacaaaggttccaagggtgaagtgggcttccctggcttagctggg
agtccaggaattcctggagccaaaggggagcaaggattcatgggtcctccgggccctcaa
ggacaacccggcttacctggcactcctggtcatcccgtggaggggcccaaaggagaccga
ggacctcagggtcaacccggcttgccagggcatccgggacctatggggcctccagggttc
cccggactcaatgggccgaaaggtgacaagggaaatccaggttggccaggagctcctggg
gttccaggccccaagggagacccaggattccaaggcatgccgggcattggcggttctcca
gggatcacaggctcaaagggagatatgggaccaccaggagttccaggattccaaggtcag
aaaggtcttcctggcctccagggagtaaaaggagaccagggggatcaaggcatacctggc
cctaaaggtctccaaggctccccaggccctccaggtccatatactgtcatcaaaggagag
ccagggctccctggtccagagggtccccctggtctaaaaggactccagggaccaccaggt
ccaaaaggacagcaaggtgtgacaggctcggtgggcttgcctggacccccaggtgttcct
gggtttgatggtgcccctggccagaaaggagagactggcccgtttggaccacctggtccg
agagggtttcctggtccaccgggccccgatgggctgccaggacccatgggtcccccaggt
accccatctgtggaccatggcttccttgtgaccaggcatagtcagacaacagatgatcca
ctgtgtcctccagggaccaaaattctctaccatgggtactctctactctacgtgcagggc
aacgaacgggcccatgggcaggacttgggcacggcgggtagctgtctgcgcaagttcagc
acgatgcccttcctcttctgcaacatcaacaacgtctgcaacttcgcctccagaaacgac
tactcctattggctgtccacgccagagcccatgcccatgtccatggcgcccatctccggg
gacaacatccggcccttcattagcaggtgtgcagtgtgtgaagcacccgccatggtgatg
gcggtgcacagtcaaaccatccagatcccgcagtgccccaacggttggtcctcactgtgg
atcggctattccttcgtcatgcacaccagcgctggtgctgaaggttctggtcaagccctt
gcatcccctgggtcctgtctggaagagtttagaagcgccccgttcatcgagtgccatggc
cgaggaacatgcaattactacgcgaatgcttacagcttttggctcgccaccatagagaga
agcgagatgttcaagaagcccacgccgtccaccttgaaggcaggggagcttcgcacgcac
gtcagccgctgccaagtgtgcatgagaagaacataa

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