Microtus oregoni (creeping vole): 121462299
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Entry
121462299 CDS
T08307
Symbol
Sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
morg03000
]
121462299 (Sox1)
Transcription factors [BR:
morg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121462299 (Sox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121462299
NCBI-ProteinID:
XP_041529755
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGTKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGIPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctacactcgcccggcggcgcccaggcgcccacg
aacctctcgggcccggccggggcgggcgggggcggtggtgggggcgggggcggcggtggc
ggcgggggcaccaaggccaaccaggatcgggttaagcggcccatgaacgccttcatggtg
tggtcccgcggacagaggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagcaagcgcctgggggccgaatggaaggtcatgtccgaagctgagaagcggccgttc
atcgacgaggccaagcgactacgagcgctgcacatgaaggagcacccggattacaagtac
cggccgcgccgtaagaccaagacgttgctcaagaaggacaagtactcgctggccggtggg
ctgctggcggccggcgcaggtggcggtggcgcagccgtggccatgggcgtgggcgtgggc
gtcggggcggcagcggtgggccagcgcctggagagcccgggcggcgcggctggaggcggc
tacgcgcacgtcaacggctgggccaacggtgcctacccgggctcggtagccgcagctgct
gcagccgcggccatgatgcaggaggcacagctagcctacgggcagcacccaggcgcgggc
ggcgcgcaccctcacgcgcacccggcgcacccgcacccgcaccatccgcacgcgcatcct
cacaacccgcagcccatgcaccgctacgacatgggcgcactgcagtacagccccatctcc
aactctcagggctacatgagcgcgtcgccttcgggctacggtggcatcccctacggcgcc
gcagcagccgccgccgccgctgctggcggcgcgcaccagaactcggctgtggcggccgcg
gcggctgcagcggcggcatcgtcgggtgccctcggtgccctcggctcgctggtcaagtca
gagcccagcggcagcccgccggcccctgctcactcgcgggcgccgtgccccggggacctg
cgcgagatgatcagcatgtacctgcctgcaggcgagggtggagacccggcggctgcagcg
gctgccgcggcccaaagccgactgcactcgctgccacagcactaccagggcgcgggcgcg
ggtgtcaacggcacggtgcccctgacgcatatctag
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