Microtus oregoni (creeping vole): 121462650
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Entry
121462650 CDS
T08307
Symbol
Ushbp1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
morg03037
]
121462650 (Ushbp1)
Cilium and associated proteins [BR:
morg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121462650 (Ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Mei5
Motif
Other DBs
NCBI-GeneID:
121462650
NCBI-ProteinID:
XP_041530327
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSARATRPRSRRGRHPPPGELDPVAESSEEAEATSGRLEAKLGLLPEHLSPDLQRPGSRP
EDDYCVGSHGALALKPEEGCKAEVESPQSPQAATLDTGPAETSVASVFQTLHSRLSSLEA
TVTAWRHHSLSFARPAEGEDSGQGAPGSFGEEEARSGQQEAARLIERNAWLRLALGSREE
ELVCAQASLQDARAEKETLQRQVQELEDSLMQLEASLPTPLLRAGCTNSSNSSSSGAEGQ
PWAPQDSPLAHPLLQRLRSDSSTHIFECLSTQPSAPEMHLMEDQMGQLQGSIEKLKCFNR
LLLAVLQGHKGRCESLSMQLGQREAEATALRLALQYSEDCEEAYGVLLTLRTAGAGATKS
DLQAAETEASRLLVEKEAAMDGEISWPSPEGSSVDKPTPQELVAQLHGYIQHLRERWALV
KIPPALSPDTTPWPTMPHAEATVQAILEIQPGPALPRLEKSQIQQDLAATRDSLADLVLR
LQLSRREKRGLELRESALRAQGPAHLLLLQQLRWERTHLAGDGSRGGSSEDPSSEEEDDE
EDGQQHYQDSRPSGTAAIPAAAAGTGDSEGQNQTCSECRAEPRAVQGSQLPGLGLQRSPP
EAGRAAPEVGAADCSDAGPAGRGADGAGSHRQSPGEAQDSTARPDFPVGPRPNLHVTCSY
GRHVIECLVMGCRDGSAALAEDLGSVSALHSQCL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccgggccacacggccccgaagtcgccgagggaggcatcctccacccggggag
ctggatccagtggctgagagttcagaggaggcagaggccaccagtgggagattagaagcc
aaactcgggctgcttccggaacaccttagtcctgacctgcagagacccgggagccggcct
gaggatgattattgtgtgggatcccatggggccctagccttgaagccagaggaagggtgc
aaggctgaggtggaaagcccccagagcccgcaggcagccaccctggatactggccctgct
gagacgtcagtagccagcgtgttccagaccctgcacagcaggctgagctcccttgaggcc
accgtgaccgcctggcgccaccactccctaagctttgcaaggccagcggaaggagaagat
agtggccagggggcacctgggtcctttggtgaggaagaagccagatctggacagcaggag
gcagctcgcctcatagagaggaacgcctggctcaggctggccctgggcagccgggaggag
gagttggtttgcgctcaagcttccctgcaggatgcccgggcagagaaggagaccctgcag
agacaggtgcaggagctggaggattccctgatgcagctggaggcttccctgcccaccccg
ctcctcagagcagggtgtacaaacagcagcaactccagcagttctggggcagaagggcag
ccctgggcacctcaggattcccccttggctcaccctcttctccaacgcctccggagtgac
tccagcacccatatctttgagtgcctttctacacagccttcagcccccgagatgcacctc
atggaggaccagatggggcagctccaaggaagcattgagaagttgaagtgcttcaaccgc
cttctgctggctgtgctccagggtcacaagggccgctgtgagagccttagtatgcagctg
ggtcagcgggaggctgaggccacagccctgcgcctggccctgcaatacagtgaggattgt
gaggaggcatatggagtgctgctcactctgaggactgctggagctggagccaccaaaagt
gacctgcaggctgcggagacagaggcatctaggctgctggtggagaaggaagccgctatg
gatggagagatatcctggcccagccctgagggcagcagtgtggacaagcctacaccacag
gaactggttgctcagctccatggctatatccagcatctccgggaacgctgggctctggtg
aagatccccccagcgctcagccctgacaccacaccctggcccactatgccccacgcagaa
gcaacagtgcaggccattctggaaatacagcctggcccagccctgccccggctagagaag
tctcagatccagcaggacctggcagctactcgggacagtctggcggacttggtgctgcgg
ctgcagctgtcccggagagagaagcgcgggctagagctgcgggagtccgcgctgagggcc
caaggccccgcccacctgctgctactgcagcagcttcgctgggagcggactcacctggct
ggagatggcagcagaggaggcagcagcgaggacccgagcagcgaagaggaggacgatgag
gaggatggacagcaacactaccaggacagtaggccttcaggcacagctgcgatccctgcg
gcagcagctggaacaggtgactcagaagggcagaaccagacgtgctcagagtgcagagct
gaaccgagagctgtgcaaggctcacagctccctggtcttggccttcagaggagcccacca
gaagcaggaagagcagcgccggaagttggagcagcagattgctcggatgcaggcccagca
ggcagaggagctgacggtgctggcagccaccgccagagccctggagaagcccaggactcc
acagccaggccagactttcctgtaggacccagaccaaacttgcatgtaacatgcagctat
ggcaggcatgtcatagaatgtcttgtcatgggctgcagagatggctcagcggctcttgca
gaggacctgggttcagtttccgctctccacagccagtgcctgtaa
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