KEGG   Microtus oregoni (creeping vole): 121462656
Entry
121462656         CDS       T08307                                 
Symbol
Rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03320  PPAR signaling pathway
morg04148  Efferocytosis
morg04151  PI3K-Akt signaling pathway
morg04659  Th17 cell differentiation
morg04919  Thyroid hormone signaling pathway
morg04920  Adipocytokine signaling pathway
morg04928  Parathyroid hormone synthesis, secretion and action
morg04932  Non-alcoholic fatty liver disease
morg04976  Bile secretion
morg05160  Hepatitis C
morg05200  Pathways in cancer
morg05202  Transcriptional misregulation in cancer
morg05207  Chemical carcinogenesis - receptor activation
morg05216  Thyroid cancer
morg05222  Small cell lung cancer
morg05223  Non-small cell lung cancer
morg05226  Gastric cancer
morg05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:morg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121462656 (Rxra)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    121462656 (Rxra)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    121462656 (Rxra)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    121462656 (Rxra)
   03320 PPAR signaling pathway
    121462656 (Rxra)
   04919 Thyroid hormone signaling pathway
    121462656 (Rxra)
   04928 Parathyroid hormone synthesis, secretion and action
    121462656 (Rxra)
  09154 Digestive system
   04976 Bile secretion
    121462656 (Rxra)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121462656 (Rxra)
   05202 Transcriptional misregulation in cancer
    121462656 (Rxra)
   05207 Chemical carcinogenesis - receptor activation
    121462656 (Rxra)
  09162 Cancer: specific types
   05226 Gastric cancer
    121462656 (Rxra)
   05216 Thyroid cancer
    121462656 (Rxra)
   05222 Small cell lung cancer
    121462656 (Rxra)
   05223 Non-small cell lung cancer
    121462656 (Rxra)
  09172 Infectious disease: viral
   05160 Hepatitis C
    121462656 (Rxra)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    121462656 (Rxra)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    121462656 (Rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:morg03000]
    121462656 (Rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:morg03310]
    121462656 (Rxra)
Transcription factors [BR:morg03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    121462656 (Rxra)
Nuclear receptors [BR:morg03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   121462656 (Rxra)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 121462656
NCBI-ProteinID: XP_041530344
LinkDB
Position
Unknown
AA seq 475 aa
MTQQLSGLGLRQAHFTVDFSTQVNSSSLSSPTGRGSMAAPSLHPSLGPGIGSPLGSPGQL
HSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSSEDI
KPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDL
TYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSAN
EDMPVEKILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIP
HFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFD
RVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHK
YPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQTT
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgacacagcaacttagtgggttgggcctgcggcaggctcacttcacagtagacttctcc
acccaggtgaactcttcatccctcagctctccaacgggtcgaggctccatggctgccccc
tcgctgcacccctccttgggtccaggaatcggatctccactgggctcccccgggcaactg
cactcacctatcagcaccctgagctctcccatcaatggcatgggcccacccttctctgtc
atcagctcccctatgggcccgcactccatgtcggtacccaccacacccacactgggcttt
gggactggtagcccccagctcaactcacccatgaaccccgtgagcagcagcgaggacatc
aaacccccgctgggcctcaatggcgtcctcaaggttcctgcccatccctcaggaaatatg
gcgtccttcacgaagcacatctgtgctatctgtggggaccgctcctcaggcaagcactat
ggggtgtacagttgcgagggctgcaagggcttcttcaagaggacagtacgcaaagacctg
acctacacctgccgtgacaacaaggactgcctgatcgacaagaggcagagaaaccggtgt
cagtattgccgctaccagaagtgcctcgccatgggcatgaagcgggaagccgtgcaggag
gagcggcagagaggcaaggaccggaatgagaatgaggtggagtccaccagcagtgccaat
gaagacatgcctgtggagaagattctggaagccgagcttgctgttgagcccaagactgag
acatacgtggaggcaaacatggggttgaaccccagctcaccaaatgaccctgttaccaac
atctgccaagcagcagacaagcagctcttcactcttgtggagtgggccaagaggatcccg
cacttctctgagctgcctctggacgaccaggtcatcctactacgggcaggctggaacgag
ctgcttattgcctccttctcccaccgttccatagctgtgaaagatgggatcctccttgcc
actggcctgcacgtacaccggaacagcgctcacagtgctggggtgggcgccatctttgac
agggtgctaacggagctggtgtctaagatgcgtgacatgcagatggacaagacggagctg
ggctgcctgcgtgccattgtcctcttcaaccctgactccaaggggctttcaaaccctgcc
gaggtggaggcgctgagggagaaggtgtacgcatcactagaggcatattgcaaacacaag
tatccggagcagccaggcaggttcgccaagctgctgcttcgcctgcccgcactgcgctcc
atcgggctcaagtgcctggagcacctgttctttttcaagctcatcggcgacacacccatt
gacaccttccttatggagatgctggaggccccacatcaaaccacctag

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