Microtus oregoni (creeping vole): 121462953
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Entry
121462953 CDS
T08307
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03018
RNA degradation
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121462953 (Lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
121462953 (Lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121462953 (Lsm4)
03041 Spliceosome [BR:
morg03041
]
121462953 (Lsm4)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121462953 (Lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
121462953 (Lsm4)
Spliceosome [BR:
morg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121462953 (Lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
121462953
NCBI-ProteinID:
XP_041530866
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MSAGWKVMWCRIPGLGACWLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLRE
VICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVREEAAKGRGRGGPQQQKQQKGRG
MGGAGRGVFGGRGRGGIPGAGRGQPEKKPGRQAGKQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggctggaaggttatgtggtgcaggatcccagggcttggcgcatgctggctc
ccgttgtcgctgctgaagacagcacagaatcaccccatgctggtggagctgaagaatggg
gagacatacaatgggcacctggtgagctgtgacaactggatgaacatcaaccttcgggag
gtgatctgcacatcgagggacggcgacaagttctggcggatgcccgagtgctatatccgt
ggcagcaccatcaagtacctacgcatccccgatgagatcatcgatatggtgcgggaagag
gccgccaagggccgcgggcgagggggaccacagcagcagaagcagcagaaaggccgaggc
atgggtggtgctggccgaggtgtgtttggtggccggggccggggtggcataccaggagca
ggccgcggtcagcccgagaagaagccagggcggcaagcaggaaagcagtaa
DBGET
integrated database retrieval system
