Microtus oregoni (creeping vole): 121463485
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Entry
121463485 CDS
T08307
Symbol
Vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
morg04131
]
121463485 (Vps50)
Membrane trafficking [BR:
morg04131
]
Protein recycling
Others
EARP complex
121463485 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
121463485
NCBI-ProteinID:
XP_041531667
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAFESLRVPGKEEFRELREQPSDPQVEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAENT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHGKQDSEEAAAASEG
SNVMSTEETNFDRSYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSINYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPLVTTSKPMTLFEQYCSAGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKQDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSTDPTATLTAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNRKLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLIKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKDHREYSAKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaaatctctaatgacccggcagggtctgaaaagccctccagagagcctc
agtgatctcggtgcctttgagagccttcgggtccctggaaaggaggaattcagggagctt
cgagaacagccgagcgaccctcaagttgaacaagagctaattaatagtatcgagcaagtc
tatttttctgcggacccatttgatattgttaaatatgagctggagaagcttcctcctgtt
ctcaatctgcaagaactggaggaatacagagataaattaaagcaacaacaagctgcagtt
tctaaaaaagtagcagatttgattcttgaaaaacagcctgcttatgtaaaggagcttgaa
agagttacatcattgcagacaggtcttcagctggctgctgttatctgcacaaatgggagg
agacaactgaatatcgcaaaggaaggttttactcaggccagcttaggccttcttgcaaat
caaaggaagcgccagttgttgattggacttctgaagtcattgagaactataaaaacattg
caaaggaccgatgtacgtttaagtgaaatgctagaggaggaggactatccaggagctatt
cagctgtgcctggaatgtcagaaggccgccagcacttttaagcactacagctgtataagt
gagctgaattcaaagctgcaggatactttggaacaaattgaggaacagctggatgtagct
ctttccaaaatctgcaagaattttgatattaatcattataccaaagttcagcaagcttat
cgacttcttggaaaaacacagacggcaatggatcaacttcatatgcacttcactcaggcc
attcacaacaccgtgtttcaggttgtgctcggctatgtggagctgtgtgcggaaaacaca
gatacaaaattccagaagctgcaatacaaagatctctgtacgcatgtaacgccggacagc
tatattccatgcctggcggacctgtgcaaagcactgtgggaagtcatgctcagctactac
aggaccatggagtggcacgggaagcaggacagtgaggaggcagccgcagcgtctgaagga
agtaatgtgatgagtactgaagaaaccaattttgatcgtagctacgtgaaaaagaaactg
gagcatggcctgacgcgaatatggcaggatgtccaactaaaagtaaaaacctacttactt
ggaactgatttatctatattcaaatacgatgattttatctttgttttggatatagtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggaatcc
attagaaagcaaagtatcaattatttcaagaaccaccacagaatacgacttgatgaactg
agaatgttcttagagaatgagacatgggaactttgccctgttaaatcaaatttcagcatc
ttgcagcttcatgaatttaaatttctggaacagtctcgttccccatcagtctcacctagt
aagcagccattggtgactacttcaaaacccatgactttgtttgagcagtactgtagtgct
gggaatccatttgaaattcaagctaaccataaagatgaagaaacagaagatgtattggct
tctaatgggtatgaatctgacgagcaggagaagagtgcctatcaggagtatgacagtgac
agtgatgttcctgaagagctgaagcaggattacgtggatgagcagacaggcgatgtgccc
gtgaagagtgtttcaagagagacccttaagagcaggaagaaatcagattacagtctaaat
aaagtgaacgcaccaatcttaacaaatacaacgttgaatgtaataagacttgttgggaag
tacatgcagatgatgaacattcttaagccaattgcctttgatgttatccattttatgtcc
cagctatttgattattacttgtatgcagtatataccttttttggtcggaatgattcactg
gaatccacaggacttggcctcagtagtagccgactaagaacaacgctaaacagaatacaa
gaaagccttattgacctggaggtttcaactgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtacccagcccacacctcaatcaactagtgattttgacatctggg
gatacattatatgggttggcagagagagtggtagccacagaatccttggtgttcctggct
gaacagttcgagttccttcagccacacttggatgctgtgatgcctgcagccaaaaagccc
tttcttcagcagttttattctcagactgtctcaactgccagtgaactacgcaaacccatt
tactggattgtggctggtaaagccattgattatgaacagatgcttctcctcatgactaat
gtgaaatgggatgtcaaagagatcatgtcacaacacaacatatatgtagacgcattgctg
aaggagtttgagcagtttaacaggaagttaaatgaagtttctaagagagttcggataccc
ttgcctgtctcaaatatactttgggaacattgtatacggctagctaacaggactattgtg
gaaggatacgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatcaaacttgaaaaactaactgatattagacccattcctgataaa
gagtttgtggaaacatatatcaaagcatactacctaactgagaatgacatggagcgctgg
atcaaagatcatagggaatattcagcgaagcagctgaccaacctggtgaatgtttgcctg
ggatctcatatcaataaaaaagcaagacaaaagctcctagcagctatagatgatatagac
aggcctaaaagataa
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