Microtus oregoni (creeping vole): 121463836
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Entry
121463836 CDS
T08307
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04612
Antigen processing and presentation
morg05145
Toxoplasmosis
morg05152
Tuberculosis
morg05164
Influenza A
morg05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
121463836 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121463836 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
121463836 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
121463836 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
121463836 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
morg01001
]
121463836 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
morg04054
]
121463836 (Ciita)
Enzymes [BR:
morg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121463836 (Ciita)
Protein kinases [BR:
morg01001
]
Serine/threonine kinases: Other
TAF1 family
121463836 (Ciita)
Pattern recognition receptors [BR:
morg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121463836 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
LRR_8
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
121463836
NCBI-ProteinID:
XP_041532273
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MNHFQAILAQVRMLLSSQQPRQVQALLDSLLEEELLSREYHCALLREPDGEALARKISLT
LLEKGDLGLACSSWVHSRLQDPVLERATSYRDHGGHSLCATMELGLPEGSYLELLNSDAD
PLHLYHLYDQMDLAGEEIELSSELDTDTINCDQFSKLLQDMEGDEETREAYANIAELDQY
VFQDTQLEGLSKDLFIEHIGAEEGFGESMEVSGEEAQRPQKRCSTEEHPTDSKHRKLGPP
SRSSLNCLDLPIGHIQLLPTLPQGLLQISGAGTGLSSVLIYHGEMPQVNQAVPSGSPTVP
SLPKSPGRPGSTSPFAPSAADLPSMPEPALTSRVNETEDTTSSSPCQEGPESSIKLPKWP
ESVERFQHSLQDKYQVEPESLSSPLVAMELVRARLERGSNKSQERELATPDWTERQLALS
GLAEVLVGSRRWPRETQVVAVLGKAGQGKSHWARMVSQIWARGQLPQYDFVFYVPCHYLD
RPGDSYYLRDLLCPPSLQPLVMDDEVLGHIVRQPDRVLLILDAFEELEAQDGLLHGPCGP
LPPEPCSFRGLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSIKQAQTY
MRHYFENSGTAGDQDKALGLLERQPFLLTHSHSPALCRAVCQLSKALMEQGTEDQLPGTL
TGLYVSLLGPAVRDSPPGALTELAKLAWELGRRHQSTLQETQLLSVEVRSWAVTRGLVQP
ALGTTEDQLAFSSFLLQCFLGAVWLAQCDEIRDKELPQYLALTPRKKRPYDNWLEGVPRF
LAGLVFQPRTHCLGALVEPAVTEKKRKVLTRYLKRLQLGTLRASRLLELLHCAHETQEPG
IWEHVTHQLPEHLSFLGTRLTPPDVHMLGRALETASQDFSLDLRQTGIEPSGLGNLVGLS
CVTSFRASLSDTMVLWESLRQQEESQLLQAAEEKFTIEPFKAKSPKDVEDLDSLVQTQRL
RNPSEDAVPDLPAIRDLKKLEFALGPVLGPQAFPTLAKILPVFSSLQHLDLDSLSENKIG
DDGVSKLSATFPQLKVLETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCIRDAG
AKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHL
QQLDSRISLR
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggccattctggctcaggtgcggatgctgctctccagccagcagcca
aggcaggttcaggccctcctggacagcctgctggaagaagagctgctctcccgggaatac
cactgtgccctgctccgagagcctgacggcgaagctctggcccggaagatttccctgacc
ctgctggagaaaggggacttaggcttggcttgctcgagctgggtccatagcaggctgcag
gacccagtgttagagagggccaccagctacagggaccatggaggtcatagtctgtgtgcc
accatggaactggggcttccagagggcagctacctggagctccttaacagcgatgctgac
cccctccacctctaccacttgtacgaccagatggacctggctggggaggagatcgagctc
agctcagagctggacacagacaccatcaactgtgaccaattcagcaagctgctgcaggac
atggaaggggatgaagagaccagggaggcctatgccaacatcgcggaactggatcagtac
gtgtttcaggacacccaactggagggcctcagcaaggacctcttcatagagcacattgga
gcagaggaaggcttcggtgagagcatggaagtttctggagaagaagcacagaggccccag
aagagatgctccacagaagagcaccctacggattccaagcacaggaagctagggcccccc
tctaggtcctcactgaactgtctagatctccccatcggacacatccagcttcttcccact
ctgccccagggacttttgcaaatctcaggggctggcacaggtctctccagtgttctgatc
taccatggtgagatgccccaagtcaaccaagcagtcccttcaggcagccccactgtcccc
agcctccccaaatccccagggcggccgggctccaccagcccctttgcaccatctgcagct
gacctgcccagtatgcctgaacctgcgctcacctcccgtgttaatgagacagaggacaca
acatcctcctccccatgccaggaaggtcccgagtcttccatcaagcttccaaaatggccg
gagtctgtggagcggttccagcactccctgcaggacaagtaccaggtggagcctgagagc
ctgagcagtcccctggtagccatggagctggtacgagccaggttggagagaggcagcaac
aagagccaggaaagggagctagccactccagactggacagagcgccagctagcccttagt
ggcctagctgaggtgcttgtcggcagccgccggtggccacgagagacacaggtggtcgct
gtgctgggcaaggctggccaaggcaagagccactgggcccggatggtgagtcagatctgg
gcccgtggccagttgccgcaatatgactttgtcttctatgtcccatgtcactacttggat
cgtccaggcgactcttactacctgcgtgatctgctctgtcccccaagcctgcagccactg
gtcatggatgatgaggtcttaggtcacatcgtgaggcaaccggaccgtgtcctgctcatt
ctagatgcttttgaggagctagaggcccaagatggtctcctgcacggaccatgtggacct
ctgcccccagagccctgctccttccggggactgctagctgggctgttccagcggaagctg
ctgcgtggctgtaccctgctcctcactgcccggccccggggccgcctggctcagagcctg
agcaaggcagacgccatcttcgaggtgcccagcttttctattaaacaggctcagacttat
atgaggcactactttgagaactcagggacagcaggggaccaagacaaggccctgggcctc
ctggagcgccagccttttctcctcacccacagtcacagtcctgctctgtgcagggctgtg
tgccagctctccaaggccctgatggaacagggcacagaggaccagctgcctggtacactt
acaggactctatgtcagcctgctaggccctgcagtccgagacagtcctccaggggcctta
actgagctggccaagctggcctgggagctgggccgcagacaccaaagcaccttgcaagag
acccagttactatccgtggaggtgaggtcctgggcagtgacccgaggcttggtgcagcct
gccctggggaccacagaggaccagctggccttctctagtttcctgctacagtgcttcctg
ggtgctgtgtggctggcacagtgtgatgaaatcagagacaaggagctgccacagtacctg
gccttgaccccaaggaagaagagaccctatgacaactggctggagggtgtaccacggttt
ctggctggattggttttccagcctcgaacccactgcctgggagcgctggtggagcctgca
gtgacggaaaagaaacggaaagttcttaccaggtacctgaagcgcctacagctgggaaca
ctgcgggccagccgactgctggaactgctacattgtgcccatgagacacaggaacctggg
atttgggagcacgtaacacaccagctccctgagcatctctccttcctgggcacccggctt
acacccccagatgtgcacatgctgggcagggccctagagacagccagccaggacttctcc
ctggaccttcgtcagactggcattgagccctctggactggggaacctcgtgggactgagc
tgtgtcaccagtttcagggcctccttgagtgacactatggtgctatgggagtccctacgg
cagcaggaagagtcccagctactccaggcagcagaggagaaattcaccattgagccattc
aaggccaagtctcccaaggatgtggaagacctggacagcttggtgcagacccagaggctg
agaaacccctcggaggatgcagttccagatcttcctgccatccgggaccttaagaagcta
gagtttgcgttgggcccagtattgggcccccaggctttccccacactggcaaagatcctt
cctgtgttctcatccctgcagcacctggacctggactcactcagtgagaacaagattggg
gacgacggtgtgtcgaagctctcagccacctttcctcagctcaaggtcctggagacgctc
aacctgtcccagaacaacatcaccgatgtgggtgcctgcaagcttgcagaagccctgccg
gccctagccaagtccctcctaaggctgagcttgtacaataactgcatccgtgacgcagga
gccaagagcctggcacaagtgcttccggacatggtgtccctgcgagtgatggatgtccag
ttcaacaagttcacggctgccggtgcccagcagctggcctccagccttcagaagtgccct
caagtggaaacgctggcaatgtggacacctactatcccctttggggttcaggaacacttg
cagcagctggattcccggatcagcctaagatga
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integrated database retrieval system
