KEGG   Microtus oregoni (creeping vole): 121464136
Entry
121464136         CDS       T08307                                 
Symbol
Trim42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
morg  Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:morg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:morg01009]
    121464136 (Trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:morg04121]
    121464136 (Trim42)
Protein phosphatases and associated proteins [BR:morg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121464136 (Trim42)
Ubiquitin system [BR:morg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    121464136 (Trim42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2 DUF386
Other DBs
NCBI-GeneID: 121464136
NCBI-ProteinID: XP_041532668
LinkDB
Position
Unknown
AA seq 722 aa
METAMCVCSPCCTWQRCCPRLFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAEN
PNCHWCCCSWANDPNCKYCCTTNTNMKCYYYESRCCRNATFTFKRGCLRSIRISSKTALR
IGSSDTQLEELKSMPASSHLVSHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPMCNRSHCMPYSHQMHLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRSRRIAYKRCVTCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEDQDEKICIHHPSSRITE
YCRSDNQLLCTFCKVAFHNGHDTVGLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKEIRNGFLKLRAILQEKEKIIMEQIENLEVSRQKEIEKYVYITTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEEGIQNTFRPDPQLRLHSLHCIPLDFA
ELSSAIHELFPTGPKKTCSSGDSLPSQYPIHSEMMITRKVTFSTHSFGNQIYQRSSSLLS
FSAANDKNKMGIEAYGRAQSAAPAKQTDGLYTYWSATGETQPPQNSNSFHNWYSFNDASV
KPPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTTPPNNVRTELCGQIRDIMQ
QNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSALQK
RF
NT seq 2169 nt   +upstreamnt  +downstreamnt
atggagaccgccatgtgtgtgtgctctccgtgctgcacctggcagagatgctgtcctcgg
ctcttctcctgtctgtgctgcaagttcatcttcacctcagagcggaactgcacctgcttc
ccctgcccctacaaggatgagcggaactgccaattctgtcactgcacctgcgcggagaac
cccaattgccactggtgctgctgctcctgggccaacgaccccaactgtaagtactgctgc
acgaccaacaccaatatgaaatgctactactatgagagccgttgctgccggaatgccacc
ttcacgttcaaaaggggttgccttcggagcatccgtatctcctccaagaccgccctccgc
atagggagcagcgacacccagctggaggagctcaagtccatgcccgccagcagccacttg
gtgagccatctcacctgccccatgtgcaaccggctgcgcctgcattccttcatgctgcca
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcagaagcatgccgaggtcaca
gagaacttcttcatcctcatctgccccatgtgcaaccgctcgcactgcatgccctacagc
caccagatgcaccttccagaaaactatctgcgcgggcgcctcaccaaacgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgatcctcggggcccatcctctgccaggtg
tgccgcagccgtcgcattgcctacaagcgctgtgtcacctgccgcctcaatctgtgcaac
gactgcctcaaggccttccactcggacgtggcgatgcaggaccacgtcttcgtggacacc
agcgccgaggaccaggacgagaagatttgcatccatcacccgtccagccgcatcaccgag
tactgccgcagcgacaaccagctgctctgtaccttctgcaaggtcgcttttcacaatggc
catgacacagtcggcctcatagatgcctgctcagagaggtctgccgctctcttcagtgcc
atcgccaagttcaaagcagtccgatacgaaattgataacgacctgatggaattcaacatt
ttaaagagcagctttaaagccgacaaggaggcgaagcggaaggagatcagaaacgggttc
cttaaactgcgagccatcctgcaagagaaagagaagattatcatggagcagatagagaac
ctggaggtgtccaggcagaaggagatcgagaagtacgtgtacatcaccaccatgaaggtg
aacgagatggatggcctgatcgcctactccaaggaagcgctgaaggaaacgggacaggtg
gccttcctgcagtcggctaagatcctggtggaccagatcgaggagggcatccagaacacc
ttcaggcccgaccctcagctgcggctgcactccctacactgcattcccttggatttcgct
gaactctccagcgccatccacgagctctttcccacgggacccaagaagacttgctcctcg
ggggactctctcccctcccagtatcctatccactcagaaatgatgatcaccaggaaggtc
acattcagcacccacagcttcggcaaccagatataccagcgaagctcctccttgctgtcc
ttcagtgccgccaacgacaagaacaagatgggaatagaggcctatgggagggcccagtct
gctgcgcctgccaaacagactgacggcctctatacctactggagtgccacgggggagacc
cagcccccacagaacagcaatagcttccacaactggtactcattcaatgacgcctccgtg
aagcccccaggcccaattgtcatctaccagactctggtgtatccaagagctgccaaggtt
tactggacatgcccaacagaagacgtggactcctttgagatggaattctatgagctcgtt
accacccctcctaacaatgtccgaacagagctctgtggacaaatccgggacatcatgcag
cagaacctggagctgcacaacctcacccccaacacggagtatctgttcaaggttagagcc
atcaatgacaacggtcctgggcagtggagtgacatctgcaaggtggtaacaccagatggg
cgtgggaagaaccgagctaagtggggcctgctgaagaatatccagtctgccctgcagaag
cgcttctag

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