KEGG   Microtus oregoni (creeping vole): 121464180
Entry
121464180         CDS       T08307                                 
Symbol
Wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121464180 (Wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:morg03400]
    121464180 (Wdr48)
DNA repair and recombination proteins [BR:morg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     121464180 (Wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_DCAF4 WDR54 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_VPS8 WD40_like RAWUL Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 121464180
NCBI-ProteinID: XP_041532781
LinkDB
Position
Unknown
AA seq 691 aa
MGLLPAHLPLLSAAFLRSDRDPAAEATRCPRVSYVIRDEVEKYNRNGVNALQLDPALNRL
FTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCHGKTLISASSDTTVKVWNAH
KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLS
GNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQC
LSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPD
IRVLICEEKAPVLKMELDRSADPPPAVWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNP
ITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFED
EIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGL
LLQALLEYWPRTHVTPMDEEENEVNHVSGEQESRVQKGNGYFQVPPHTPVIFGEAGGRTL
FRLLCRDSGGETEAMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRL
SASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPEQEKEEDIAVLAEEKIELLCQDQ
VLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgggccttctgcccgctcacctgcctctgctctcggccgccttccttcggagcgaccgc
gatccggcggcggaggccacgcggtgcccgcgggtttcctatgttattcgagatgaagtg
gagaagtacaatcgcaatggagttaatgccctgcagctggacccagcactcaacaggctc
tttaccgcagggcgggactccatcatcagaatatggagtgtcaatcagcacaagcaagat
ccatacatagcatccatggagcaccacaccgactgggtgaatgatgtcgtactctgttgc
catgggaaaacgttaatatctgcctcctctgacacgacggtcaaagtgtggaatgcacac
aaaggattctgcatgtccacactcaggacacacaaggactatgtaaaggccttagcatat
gccaaggataaagagctggtagcatcggctgggttggacagacaaatattcctttgggat
gtgaatactctgacagcattgactgcctcaaataacactgtcacaacttcttcattaagt
gggaacaaagattccatttatagcctggccatgaaccagctgggaacaatcattgtatca
gggtccactgaaaaggttctaagagtgtgggatccgagaacctgcgcgaagctcatgaag
ctgaaagggcacacagacaacgtgaaggcgctgctgctgaacagggacggcacgcagtgc
ctctctgggagttctgatgggacaattcgcctgtggtcccttggccagcagagatgtata
gcaacataccgagtacacgatgaaggcgtttgggccctccaagtcaacgatgccttcaca
catgtgtactctggaggacgggacaggaagatttactgcacagacctaagaaaccctgac
attcgggtgctgatttgtgaagaaaaggcaccagttctcaagatggagcttgacagatca
gcagatccccctcctgcagtctgggttgcaacaaccaagtccacagtaaacaagtggaca
ctgaagggaattcataatttccgagcctctggtgattatgacaacgactgtacaaatccc
ataacccccctctgcacacagcccgaccaggttattaaaggtggcgctagtatcattcaa
tgtcacatccttaatgataagagacatatattaaccaaagatacaaataacaacgtggca
tattgggacgtgttgaaggcatgcaaagtggaagatttgggcaaagtggacttcgaagac
gaaattaagaaaagatttaaaatggtgtatgttccaaattggttctcagtagatctgaaa
acagggatgctgacgattactctggatgaaagtgactgctttgctgcctgggtttctgca
aaagacgctggcttcagcagtcccgacggctcagacccaaaattgaacttaggaggactc
ctactacaggcacttctggagtactggccaagaacacatgtgactcccatggacgaagaa
gaaaatgaagtcaaccacgtgagcggggagcaggaaagcagagtccagaagggaaatggg
tatttccaagtgcccccccacacccctgtgatctttggcgaagctggaggtcgcacactg
ttcaggctgctctgccgggattccgggggcgagactgaggcgatgcttctcaatgaaaca
gtaccacaatgggtaattgacatcactgtggataaaaatatgcccaaattcaacaaaatt
cctttctacctccaacctcatgcatcttcaggagcaaaaactttaaaaaaagacagactc
tctgccagtgacatgctgcaggtccggaaggtgatggagcatgtctatgagaagatcatc
aacctggacaacgagtctcagaccaccagctcttctaataacgaaaagccagagcaggag
aaggaagaggatattgctgtgttggcagaggaaaaaattgaacttctgtgccaggaccag
gttttggacccaaatatggaccttcgaacagtaaagcacttcatatggaagagtggtgga
gacctcacgctccattaccgtcagaagtccacgtga

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