Microtus oregoni (creeping vole): 121464194
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Entry
121464194 CDS
T08307
Symbol
Scn5a
Name
(RefSeq) sodium channel protein type 5 subunit alpha isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121464194 (Scn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
morg04040
]
121464194 (Scn5a)
Ion channels [BR:
morg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121464194 (Scn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
121464194
NCBI-ProteinID:
XP_041532829
LinkDB
All DBs
Position
Unknown
AA seq
2020 aa
AA seq
DB search
MANFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSATSQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATKALYILSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTELNGTNGSVMSNDQV
WDSLDLYLNDPDNYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTNHERRSKRRK
RLSSGTEDGGDDRLPKSDSEDGPRALNRLSLAHGLSRTSMKARSSRGSIFTFRRRDQGSE
AEFADDENSTAGESESHRTSLLVPWPLRRPSAQGQPSPGTSAPGHVLNGKRNSTVDCNGV
VSLLGAGDAEATSPGSHLLRPSPTVLDRPPDTTTPSEEPGGPQMLTPQAPCADGFEEPGA
RQRALSAVSVLTSALEELEESHRKCPPCWNRFAQRYLIWECCPLWMSIKQKVKFVVMDPF
ADLTITMCIVLNTLFMALEHYNMTVEFEEMLQVGNLVFTGIFTAEMTFKIVALDPYYYFQ
QGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKNYSELRHQISGSNLLPRWHMMDFFHAFLIIFRILC
GEWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGEM
NNLQLALARIQRGLRFVKRTTWDFCCGLLRRRPKKPVALATHSQLPSCIAAPRSPPPPEG
EKAPPARKETRFEEDQRPGQGTPGDSEPVCVPIAMAESDTDDQEEDGEDSLGSDEESSKQ
QESQVVSGGQEPAQEPRAWSQVSETASSEAEAITSQADWQQEREADPRAPGCSEAPEDSY
SEGSTADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCTVDTTQAPGKVWWRLRK
TCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLL
KWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYT
IVNNKSECESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEE
QPQWEDNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEK
VNILAKINLLFVAIFTGECIVKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYF
FSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
ANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSN
GSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYE
IWEKFDPEATQFIEYLALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFA
FTKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHL
LQRSVKHASFLFRQQTGSGLSDEDAPEREGLIAYMMNENFSRRSGPPSSSSISSTSFPPS
YDSVTRATSDNLPVRASDYSRSEDLADFPPSPDRDRESIV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttcttgttacctcggggcactagcagcttccgtaggttcacccgggagtcc
ctggcggccatcgagaagcgcatggcggaaaagcaggcccgaggttcggccacatcacag
gagagtcgtgagggcctgccagaggaggaggctccccggccccagctggacctgcaggcc
tccaaaaagcttccggatctctatggcaacccgccccgagaactcattggggagcccctg
gaagacctggaccctttctacagtacccagaagaccttcatcgtgctgaacaagggaaaa
accatcttccggttcagcgccaccaaggccttgtacatcctcagccccttccaccccgtg
cgcagagcggctgtgaagattctagtacattcgctcttcagcatgctcatcatgtgtacc
atcctgaccaactgtgtcttcatggcccagcacgaccctccgccttggaccaaatatgtt
gagtacaccttcactgccatctacacctttgagtctctggtgaagattctagctcgaggc
ttctgcctgcacgcattcaccttcctccgggacccgtggaactggctagacttcagcgtg
atagtcatggcatacacaactgaatttgtggacctgggcaatgtctctgccttacgcacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggcctgaagacaatcgtg
ggagccctgatccagtctgtgaagaagctggctgacgtgatggtcctcactgtcttctgc
ctcagtgtcttcgccctcattggcctgcagcttttcatgggcaacctgaggcacaagtgt
gtgcgtaatttcactgagctcaatggcaccaatggctctgtgatgtccaacgaccaagtc
tgggactctctggacctctacctcaacgacccagacaattacctgctcaagaatggcacc
tctgacgtgttactgtgtgggaacagctccgacgccgggacatgtcctgagggctaccgg
tgcctgaaggcaggcgagaacccagaccacggctacaccagcttcgactccttcgcctgg
gctttcctggctctcttccgcctgatgacacaggattgctgggaacgcctctaccagcag
accctgaggtccgcggggaagatctacatgattttcttcatgctcgtcatctttctgggt
tccttctacctggtgaacttgatcctggctgtggtggccatggcctatgaggagcaaaac
caagccaccatcgctgagacggaggagaaggagaagcgtttccaggaggccatggagatg
ctcaagaaagaacacgaggctctcactatcaggggtgtggatactgtgtcgcgtagctcc
ttggagatgtccccattggccccagtcaccaaccacgagagaaggagcaagcggaggaaa
cgactgtcttccgggacagaggatggtggggatgaccggctccccaaatctgactcggaa
gatggtcccagagctttgaatcgactcagccttgcccatgggcttagccggacatcgatg
aaggcccgctccagccgaggaagcatcttcacctttcgaagacgggaccagggctccgag
gcggaatttgcagacgatgaaaacagtaccgcgggggagagcgagagccaccgcacatcg
ctgctggtgccctggcccctgcgccgtcccagtgcccagggacagcccagccctgggacc
tcagctcctggtcatgtcctcaatgggaaaaggaatagcaccgtggactgcaatggggta
gtttctttgttgggggcaggtgatgcagaggccacctccccagggagccaccttctccgc
cctagccctacggtgctggatcggcccccagacacgaccacgccatcagaggagccaggt
ggtccccagatgctgaccccgcaggctccgtgtgcagatggctttgaggagcccggagca
cggcagcgggcgctcagtgctgtcagtgtcctcactagcgccctggaagagttggaggag
tcccaccgtaagtgtccaccgtgctggaaccgctttgcccagcgctatctaatctgggag
tgctgccctctctggatgtccatcaagcagaaggtgaagttcgtggtcatggacccgttc
gccgacctcactatcaccatgtgcattgtgctcaacacgctcttcatggctctggagcac
tacaacatgaccgtcgagtttgaggagatgctgcaggtcggaaacctggtcttcacaggg
atcttcacagcggagatgaccttcaagatcgttgcccttgatccctactactacttccag
cagggctggaacatcttcgacagcatcattgtcatccttagcctcatggagctgggcctg
tcccgcatgggcaacctgtcggtgctgcggtccttccgcctgctgcgggtcttcaagctg
gccaagtcctggcccaccctcaacacgctcatcaagatcatcggcaactcagtgggggcg
ctgggcaacctgacgctggtgctggccatcatcgtcttcatcttcgctgtggtgggcatg
cagctcttcggcaagaactactcagagctgaggcaccagatcagcggctccaacctgctg
ccgcgctggcacatgatggacttcttccacgccttcctcatcatcttccgcatcctctgt
ggggagtggatcgagaccatgtgggactgcatggaggtgtcggggcagtcgctgtgtttg
ctggtctttctgcttgtcatggtcattggcaaccttgtggtcttgaacctcttcctggcc
ttgctgctcagctccttcagtgcggacaacctcaccgcccctgatgaggatggggagatg
aacaacctccagctggccctggcccgcatccagcggggtctgcgctttgtcaagcggacc
acctgggacttctgctgtgggctcctgcggaggcgacccaagaaaccggtggctcttgcc
acccacagccagctgcccagctgcatcgctgcccccaggtccccaccacccccagagggc
gagaaggcacccccagcccgcaaggaaacacgatttgaggaagaccagcgacccggtcag
ggcactcctggggactcggagcccgtgtgtgtgcccatcgccatggctgagtcagacacc
gacgaccaggaggaggatggagaggacagccttggctccgacgaagaatccagcaaacag
caggaatcccaggttgtgtctggtggccaagagcccgctcaggagcccagggcctggagc
caggtgtcagagaccgcgtcctctgaagctgaggccattacgtctcaggcagactggcag
caagaacgggaagcggatccccgggccccggggtgcagtgaggcccctgaggacagttac
tcagagggtagcaccgctgatatgaccaacactgccgacctcctggagcaaatcccagac
cttggcgaggatgtcaaggacccagaagactgcttcactgaaggctgtgtccggcgctgt
ccctgctgcacagtggacaccacacaggccccagggaaggtctggtggcgattacgcaag
acctgctaccgcatcgtggagcacagctggtttgagacattcatcatcttcatgatcctg
ctcagcagtggagcgctggcctttgaggacatctacctggaggagcggaagaccatcaag
gttcttctggagtatgccgacaagatgttcacctatgtctttgtgttggagatgctgctc
aagtgggtggcctacggcttcaagaagtacttcaccaatgcctggtgctggctagacttc
ctcatcgtggatgtctcgctggtcagcctcgtggccaacaccttaggctttgctgagatg
ggtcccatcaagtcactgaggacactgcgtgcgctgcgacccctgagggccctgtcgcga
tttgagggcatgagggtggtggtcaatgcgctggtgggcgccatcccctccatcatgaac
gtcctcctcgtctgcctcattttctggctcatcttcagcatcatgggcgtgaacctcttt
gccgggaagtttgggaggtgcataaaccagacggagggcgacctgcctctcaactacacc
atcgtcaacaacaagagcgagtgtgagtccttcaacgtgactggggagctgtactggacc
aaggtgaaggtcaacttcgacaacgtgggggctgggtacctggcccttctgcaggtggca
acgtttaaaggctggatggacatcatgtatgcagccgtggactccagagggtatgaggag
cagccacagtgggaggacaacctctacatgtacatctatttcgtcgtcttcatcatcttc
ggctccttcttcaccctgaacctgttcattggtgtcataatcgataacttcaaccagcag
aagaaaaagttagggggccaggacatcttcatgacagaggagcagaagaagtattacaac
gccatgaagaagctgggctccaaaaagccccagaagcccatcccgcggcccctgaacaag
taccaaggctttatattcgacattgtgaccaagcaggccttcgacgtgaccatcatgttc
ctcatctgtttaaacatggtgaccatgatggtggagacagacgaccagagccctgagaag
gtcaacatcttagctaagatcaacctgctcttcgtggccatcttcacaggcgagtgcatt
gtcaagatggctgccctgcgccactattacttcaccaacagctggaacatcttcgacttc
gtggtggtcatcctgtccatcgtgggcactgtcctctctgacatcatccagaagtacttt
ttctccccgactctcttccgggtcatccgtctggccagaatcggccgcatcctcaggctg
atccgaggagccaaggggatccgcacgctgctcttcgccctcatgatgtccctgcccgcc
ctcttcaacattggcctcctgctcttcctcgtcatgttcatctactccatcttcggcatg
gccaactttgcctatgtcaagtgggaagctggcatcgacgacatgttcaacttccagacc
ttcgccaacagcatgctgtgccttttccagatcaccacatcagccggctgggatggcctc
ctcagccccatcctcaacacagggcccccatactgtgaccccaatctgcccaacagcaat
ggctcccgggggaactgtgggagcccggcggtgggcatcctcttctttaccacctacatc
atcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcagt
gtggccacggaagagagcacggagcccctgagcgaggatgactttgacatgttctatgag
atctgggagaagttcgaccccgaggccacccagttcattgagtatttggccctgtctgac
tttgcagacgccttgtccgagcctctccgcatcgccaagcccaaccagataagcctcatc
aacatggacttacccatggtgagcggggaccgcatccactgtatggatatcctgttcgcc
ttcaccaagagggtgctcggggagtccggagaaatggacgcgctgaagatccagatggag
gagaaattcatggcagccaatccttccaagatctcctacgagcccatcaccaccaccctc
cggcggaagcatgaagaggtgtcagccacggtcatccagcgggccttccggaggcaccta
ctgcagcggtccgtgaagcatgcttccttcctcttccgccagcagacgggcagtggcctc
tcggacgaggatgcccctgagcgagagggcctcattgcctacatgatgaacgagaacttc
tcccggcgcagtggtccgccctccagctcctccatctcctccacatccttccccccgtcc
tacgacagtgtcacgagagccaccagtgataacctcccagtgcgagcatcggactatagc
cgcagtgaggatctcgccgacttccccccatctccagatagggaccgagaatcaatagtg
tga
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integrated database retrieval system
