Microtus oregoni (creeping vole): 121464369
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Entry
121464369 CDS
T08307
Symbol
Rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
morg03009
]
121464369 (Rrp9)
Ribosome biogenesis [BR:
morg03009
]
Eukaryotic type
90S particles
Other 90S particles
121464369 (Rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
121464369
NCBI-ProteinID:
XP_041533222
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MIMSTAVATRKRAKPAPGPGAAAGAGKRRRKVDSAGDRGKSKGGGKMNEEISSDSETESL
APRKTEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEAREFEEDQVAGRLKEDVLE
QRGRLQKSVAKEIQAPAPTDIRVLRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETG
RKLHVIPRAKKGTQGQPSGHSSHILCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFT
GHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCV
TAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPL
ALQREAHGLHGEPGLEQPYWVSSVAALLNTDLVATGSHNACVRLWQCGEGFRQLDPLCDI
PLVGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRVPAAPVAGS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtccactgccgtggcaactcgtaagcgggcaaagccggcccccggacccggg
gccgctgcgggggccggcaagcggcggcgaaaggtcgactctgctggggacagaggcaaa
tccaagggtggcggcaagatgaatgaagaaatttccagtgattctgagactgagagtttg
gctccaaggaaaacagaggaagaggaggaggaggagctagaggagactgcgcaggagaag
aagctacgtttggccaaactctaccttgagcagcttaggcagcaagaggaggagaaggct
gaagctcgtgaatttgaggaggatcaggtggcaggacgcttaaaagaagacgtgctcgag
cagagaggcaggttacagaagtcggtggcaaaggagatccaggccccggctcccaccgac
attcgagttttacggggccaccagctctccatcacgtgcttggttatcactcctgatgac
ctggccatcttctccgccgccaaagactgcaccatcattaagtggagtgtagagactggg
cggaaactgcatgtaattcctcgagccaagaagggtacccaggggcagccttcaggccac
agcagccacatcctctgcatggccatctcctctgatggcaagtaccttgcctctggtgac
cgaagcaaactcattctaatttgggaggcccagagctgccagcacctgtacaccttcacg
ggacaccgggatgctgtgtcgggactggctttccgaagaggtacccaccagctctacagc
acttcccacgaccgctcagtgaaggtgtggaacgcagccgagaactcctatgtggagacc
ctctttgggcaccaggatgctgtggccgcattggatgccctgagccgagagtgctgtgtg
acagccgggggccgggatgggactgtgcgtgtgtggaagatcccagaggaatcccagctt
gtcttctatggccaccagggctccattgactgtatccatctgatcaatgaggagcacatg
gtgtccggtgcagatgatggctccgtggccttgtggggcctctccaagaaacggccactt
gccctccagcgggaagctcatggactgcatggggagccaggcctggagcagccctactgg
gtgtcatcggtggcggccctgcttaatacagaccttgtggccacaggctcccacaatgcc
tgtgtgcggctttggcagtgtggagagggcttccgacagcttgaccctctttgtgacatc
cccctggttggttttatcaatagcctcaagttctccagtgctggggacttcttggtggct
ggagtgggccaggagcacaggcttggccggtggtggaggatcaaagaggctcggaattca
gtctgcatcatccctctgcgcagagtccctgcggcccctgttgctggctcctga
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