Microtus oregoni (creeping vole): 121464416
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Entry
121464416 CDS
T08307
Symbol
Topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121464416 (Topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
morg03032
]
121464416 (Topbp1)
03400 DNA repair and recombination proteins [BR:
morg03400
]
121464416 (Topbp1)
DNA replication proteins [BR:
morg03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121464416 (Topbp1)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121464416 (Topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
121464416
NCBI-ProteinID:
XP_041533301
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MSRNDQEPFFVKFLKSSDNSECFFKALESIKELQSEDYLQIITEEEALKIKENDRSLYIC
DRFSGAVFDHLKQLGCRIVGPQVVTFCMRHQQCVPRAEHPVYNMLLSSVTISCTSLDKDK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKMLWEKSQ
ENKITRYTDINMEDFKCPIFLGCIICVTGLNGIHRKTVQQLTSKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTLQWFHDSIEKGFCQDESIYKAEPRAEVKTVPDTSTPT
GQSNAAVESRTLADVSHISNINSSCINETMFSSASNKLECTLENLENLDISVFQAPEDLL
DGYRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDDLRQFWSKSSHRP
HVVGAKWLLECFSKGYMLPEEPYIHSNYKPAGIAVSDQSEDQTIILEKNSTFSKKDFAPN
EKLQEADEELLAQYVNNASTIVEAKPSEATEPEVGPCSDSTQVEPCDDSTHISVHKEDHS
SVSHCLLDGSAVPEEGLFSQKSFLILGFSVENEYNIINIIREHAGKIVSLPSRIVADYAV
VPLLGCEVEATVGEVVTNTWLVTCIDYQTLVDPKSNPLFTPVSVMSGMTPLKDCVISFSQ
CVGAERDSLVFLANHLGASVQEFFVRKSNAKKGMLASTHLIVKEPTGSKYEAAKKWSLPA
VTIPWLLETARMGKRADESHFLVDSAPKQEQVLETKLPNGVGPNPDSPANPDTHLEMHRK
VAVTPLDMNHFQSKAFHAVMSQHCKQDSVSSAVGHPLKKEPSLHLDTPSKFLSKDKLFKP
SFDVTDALAALETPRTATQKRKLSSPLSEVIVRNLKIALSNSSRNTNTLPASPEPKGAHL
EEEEAPKPLVKVVVCVSKKLSKKQSELNGVAASLGAEYRWSFDESVTHFIYQGRAHDNNR
EYKSAKERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDDGLCSSRLPS
TVSAPKDVEPDHLSREDDSTVTVNKDSALENGNGRNDCKGALTQTLEMRENFQKQLQEIM
SATCIVKTPAQRTCLSRSSCNSASSTPDSTRSARSGRSRVLEALRQSRQIVPDINTEPSQ
NEQIIWDDPTAREERARLASNLQWPSYLTQYSELQVDLKKLDDSPSREPVCRSEIAEQVL
CVTEAPEHPISEEPEAPTTDRHLMPVPQAPSTAFPPKKPPVTPQPIDKIEKMEENLTKLK
KQYVFQMSSLNAQERTEYCHLIKKLGGLVIEKQCSDPRCTHMVVGYPLRNEKYLASMAAG
KWILHRTYLEACRTAGCFVQEEDYEWGSSSILDALTDVTEHQQKLALAAMRWRKRIQQRQ
ELGIVEGAFSGWKVILCVDRPREAGFKRLLQAGGAEVLPGHPVPLFNEATHLFCDLNKLK
PDESRVFIEKATAQNMTCLKTEYIADYLMLESPPCADNYRLSEAALLQNKEFGPGLSQKR
RAPAENVIKRPRVH
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgaccaagaaccgttttttgtgaagtttttaaagtcttcagacaattca
gaatgtttttttaaagctcttgagtcaataaaggagttacaatcagaagattatcttcag
attattacagaagaagaagcattgaagataaaggagaatgacagatcactttatatctgt
gaccgtttcagtggtgctgtttttgatcaccttaaacagcttggctgcagaattgttggt
cctcaagtagtcacattttgtatgcgccaccagcagtgtgtcccaagagctgagcatcca
gtttacaatatgcttttgtccagtgtaactatatcttgtacaagcctggataaagacaaa
agggaagaagttcataaatatgtacaaatgatgggtggacgagtataccgagaccttaat
gtatcggtcactcaccttattgcaggagaagttgggagcaaaaaatacttagttgctgct
aatctgaagaaacctattttgcttccttcttggataaaaatgctttgggagaagtcacaa
gagaataaaataaccagatacactgacataaacatggaagactttaagtgtcctattttt
cttggttgcattatctgcgtgactggcttaaatgggatacacagaaagacagttcagcaa
ctgacatctaagcatggaggccagtacatggggcagctgaagatgaatgaatgtacacat
ctcattgttcaagaaccaaaaggacaaaaatatgaatgtgccaagagatggaatgtgcat
tgtgtgaccctgcagtggtttcatgacagtattgagaaaggcttttgtcaggatgaatct
atatacaaggctgaacccagagcagaagtaaagacggtgcctgatacttcaactcccact
ggtcagagcaatgcagcagttgaaagtcgtactcttgcagatgtcagccatatatccaac
ataaacagcagttgtataaatgaaacaatgttcagttcagcttctaacaaacttgaatgt
actcttgaaaacctagaaaatctggacatcagtgtatttcaagcccctgaagatttgcta
gatggctatcggatttatctttgtggttttagtggcagaaagctagataaactgagaaga
cttattaacagtggcggtggagttcggtttaatcaacttaatgaagatgtaactcatgta
attgtgggagattatgatgatgacttgaggcagttttggagcaaatcatctcacaggcct
cacgtagtaggagcaaagtggttgctggagtgttttagtaaaggatatatgcttcctgaa
gagccttatattcacagtaactacaagccggctggaattgcagtctcagatcagtctgag
gaccagacaattatcttagaaaagaatagcacattctctaagaaagattttgctcctaat
gagaagctccaggaagctgatgaggaactgcttgctcagtatgtaaataatgcctccaca
atagttgaagctaagccatctgaagctacagagcctgaagttgggccttgcagtgattct
actcaagttgagccctgtgatgactccactcacatttctgtgcacaaggaagaccattct
tcagtcagccattgcttgcttgatggctctgcagttcctgaggaaggcttatttagccaa
aagagcttccttattttgggttttagtgttgaaaatgaatataatattataaacatcata
agagaacatgctggaaagatcgtgtcccttcctagcagaattgttgccgactatgctgtg
gttccgctgctggggtgtgaagtagaagcaactgtgggagaagttgttacaaatacatgg
ctggttacttgtatagattaccagacactagttgatcccaagtcaaatcccctcttcaca
ccagtgtcggtaatgtcaggaatgactcctttaaaggactgtgtgatttctttcagtcag
tgtgttggagcagagagagattccttggtatttttagcaaatcaccttggagcaagtgtt
caagaattctttgttcgtaaatccaatgcaaagaaaggcatgctcgccagtacacatctt
atagtgaaagaaccgactggttctaaatatgaagctgcaaagaagtggagtttgccagca
gtcactattccatggctcttagaaactgctagaatgggaaagagagcagatgaaagccat
tttctggttgacagtgcacctaaacaagaacaagtattagaaactaagctgccaaatgga
gtgggtccaaatccagactctccagcaaatcctgacacacatctggaaatgcacagaaaa
gtggctgttacacctttggacatgaaccactttcagagtaaagctttccatgctgtcatg
tcacagcactgtaagcaggactcggtctcttcagcagtaggacatccacttaagaaggag
ccctccttacatctggacacaccatcaaagtttctgtccaaggacaaactcttcaagccg
tcttttgatgtaacggatgcccttgcagccttggaaaccccaagaactgccacccagaaa
aggaaactgagctcaccactctctgaagtcattgtcagaaacctgaaaattgctttgtca
aatagttcccgaaacaccaacactcttcctgccagccctgagccgaagggtgcccatttg
gaagaggaagaggccccaaaaccccttgtcaaagttgtggtatgtgtgagtaaaaagctc
agtaagaagcagagtgaactaaatggggttgcagcctccctgggagcagagtacaggtgg
agttttgatgagtcggtgactcatttcatttatcagggtcgggcacatgataataatcga
gaatataaatctgcaaaagaaagaggggtacatattgtttctgagcactggcttttagag
tgtgctcaagagtataagcatcttcctgaatctctttatccacacacttataatcccaaa
atgagcctggacatcagtacagtgcaagatgacgggctctgtagtagccggctgccctca
acagtttctgcacctaaagatgttgagccagatcatttgtctagagaagacgacagcacg
gtcacagttaacaaagactcagcactagagaatgggaatggaagaaatgactgtaaagga
gctctgacacagaccttggagatgagagaaaacttccagaagcaattgcaagagatcatg
tcagcaacctgcatcgtgaagacgcctgcgcagaggacttgcctgtcaagaagcagttgt
aatagtgcttcttcaactcctgacagtactcgctctgctcggagtggacgaagtcgagtc
ctggaggcactcaggcagtctagacagatagtgcctgatatcaacacagagccctcccag
aatgagcagatcatttgggatgacccaacagcaagggaggagagagcaaggctcgccagc
aacttgcagtggcctagctacctcacacagtattctgagcttcaggttgaccttaaaaaa
ctggatgattctccttctcgagagcctgtatgccgttcagaaattgctgagcaggtctta
tgtgtgaccgaagctccagaacatccaatctctgaagaaccagaagctccaaccacagat
aggcatctaatgcctgtgcctcaagcccccagcactgctttccccccaaagaagccaccc
gtgactccacaacctattgacaagattgaaaaaatggaggagaatcttacaaaacttaaa
aagcagtatgtgttccagatgtcatctctgaatgcccaagagcggactgagtactgccac
ctgattaaaaaattaggtgggctggtgattgagaagcagtgctcagaccccaggtgcaca
cacatggttgtggggtacccattgcgcaatgagaagtacctagcctccatggcagctggc
aagtggatacttcatcgcacctatttggaagcttgcaggacagcggggtgctttgtgcag
gaagaagactatgaatggggcagtagctccatacttgatgctctcactgatgtcactgaa
caccagcaaaaactggcacttgcagcaatgaggtggaggaaaagaatccaacaaagacaa
gaattaggcattgttgagggagcatttagtggctggaaggttattttatgtgttgatcgg
ccccgagaagctgggtttaagcgtcttcttcaggcaggaggagcagaggtgttacctggt
catcccgtacctttatttaatgaggctacacatcttttttgtgacttgaataaactgaaa
cctgatgagagcagagttttcatagagaaggctactgcccagaacatgacctgcttgaaa
acagagtacatcgccgattacctcatgctggaatcacctccttgtgcggataattatcgt
ctctcagaagctgctttactccaaaataaagaatttgggccaggactatcccagaagagg
agagctcctgcagagaacgtcatcaaacgacctcgagtgcactag
DBGET
integrated database retrieval system
