Microtus oregoni (creeping vole): 121464566
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Entry
121464566 CDS
T08307
Symbol
Trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
121464566 (Trim71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121464566 (Trim71)
04121 Ubiquitin system [BR:
morg04121
]
121464566 (Trim71)
Enzymes [BR:
morg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121464566 (Trim71)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121464566 (Trim71)
Ubiquitin system [BR:
morg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121464566 (Trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121464566
NCBI-ProteinID:
XP_041533544
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSSSSASSSSSQTSTSSAGGGGPGAAARRLHVLPC
LHAFCRPCLEAHRLPAPGGAGPSDALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLD
AVVATADEPPPKNGRAGGGPGGAGGHSNHRHHAHHPPQRAAAPPPQPPPGPAASPAALLL
RRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPAAASAAQQ
LGLGPPFAGAPFSILSVFPERLGFCQHHDEEVLHLYCDTCSVPICRECTLGRHGGHSFAY
LQDALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQAEVKAVTARHKK
ALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTVSAVQQVLEEGRALDILLA
RDRMLAQVQELKTIRSLLQPQEDDRVMFTPPDQALYLALKSFGFVSSGAFAPLTKATGDG
IKRALQGKVASFTVVGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYR
PQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSEGKLCRPWGVS
VDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKD
NHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVF
LNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSNNGQ
FLRPQGVAVDQEGRIIVADSRNHRVQMFEANGNFLCKFGAQGSGFGQMDRPSGIAVTPDG
LIVVVDFGNNRILIF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgcccgcgccgctctcctccagctcgtccgcctcgtcgtcgtcgtcgcagacgtccacg
tcgtccgcgggtggcggcggccccggggcggcggcgcggcgcctgcacgtcctgccctgc
ctgcacgccttctgccggccgtgcctcgaggcgcaccggctgcccgcccccggcggcgcc
ggccccagcgacgcgctgaagctacgctgtcccgtgtgcgaccagaaagtggttctagcc
gaggcggcgggtatggacgctctgccgtcgtccgctttcctgctcagcaacctgctggat
gccgtggtggccaccgccgacgagccgccgcccaagaacgggcgagcgggcggcggcccc
gggggtgcgggcggtcacagcaaccaccggcaccacgcgcaccacccgccccagcgagcc
gccgctccgccgccgcagccgcctcccggccctgccgcctcccccgcggcgctgctgctg
cgccgaccgcacggctgcagctcgtgcgacgagggcaacgccgcctcgtcgcgctgcctc
gactgccaggaacacctgtgcgacaactgtgtccgcgcgcaccagcgcgtgcgcctcacc
aaggaccattacatcgagcgcggcccgccggggccagcggccgcctccgcggcacagcag
ctcgggctcgggccgcccttcgcgggcgcgcccttctccatcctttcggtgttcccggag
cggctcggcttctgccagcaccacgacgaagaggttctgcatctgtactgcgacacctgc
tctgttcccatctgcagagagtgcacgctgggccgccatgggggtcacagcttcgcctac
ctccaggatgccctccaggactcgcgggcactcaccatccagctgctggctgatgcccag
cagggccgccaagctatccagctgagcattgagcaggcccagacggtggctgagcaggtg
gagatgaaggcgaaggtggtccaggcagaggtcaaggctgtgacagcccgccataagaag
gccctggaagagcgagagtgtgagctgttatggaaggtggagaagataaggcaggtgaag
gctaaatctctatacctgcaggtggagaagcttcgtcaaaacctcaataagctggatagc
accgtcagtgccgtccagcaggtcctggaagagggccgagccttggatatcctgctggcc
cgagaccggatgcttgcccaggtgcaggagctcaagaccatccgcagcctcctgcagccc
caagaagatgatcgagttatgttcacaccccccgaccaggccttgtaccttgctctcaag
tcttttggctttgtcagcagcggggcctttgccccactcacgaaggccacaggagatggc
attaagcgagcccttcagggcaaagtagcctccttcactgtggtgggctatgaccatgat
ggtgagcctcgcctctcgggaggtgacctgatgtcagctgtggtcctgggccccgatggc
aacctgtttggtgcagaagtgagtgatcagcagaatgggacttacgtggtgagctacagg
ccccagctggagggggagcacctggtgtcggtgaccctgtgcaaccagcatatagagaac
agccccttcaaggtagtggtcaagtccggccgcagctatgtaggcatcgggctccccggg
ctgagcttcggcagcgagggcgacagcgagggcaagctctgcaggccctggggcgtaagt
gtggataaggagggctacatcatcgtggccgaccgcagcaataaccgcatccaggtgttc
aagccctgcggctccttccaccacaagtttggtaccctaggttcccggcctgggcagttt
gaccggccagccggggtggcctgtgatgcctcccgcaggatcgtagtggccgacaaagac
aatcaccgcatccagatctttacctttgagggccagttcctcctcaagtttggtgagaaa
ggaaccaagaatgggcagtttaactacccttgggatgtagcagtgaattctgagggcaag
atcctggtttcagacaccaggaaccaccgcatccagctgtttgggcctgatggggtcttc
ctgaataagtatggcttcgagggggctctctggaagcactttgactctccacggggtgtg
gctttcaaccacgagggtcacttggtcgtcactgatttcaacaaccaccggcttctggtc
attcaccctgattgccaatcagcacgcttcttgggctcagagggcagcaacaatggacag
ttcctccgaccacagggcgtagctgtggaccaggaaggtcgaatcattgtggccgattcc
agaaatcaccgggtgcagatgtttgaggccaatggcaacttcttgtgcaagtttggtgct
caaggcagtggcttcgggcagatggaccgcccctcaggtatcgcggtcaccccagatgga
ttgatcgtcgtggtggactttggcaacaatcgaatcctcatcttctaa
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integrated database retrieval system
