Microtus oregoni (creeping vole): 121465466 Help Entry 121465466         CDS       T08307                                  Symbol Spg11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism morg  Microtus oregoni (creeping vole) Pathway morg05014   Amyotrophic lateral sclerosis morg05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:morg00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     121465466 (Spg11)    05022 Pathways of neurodegeneration - multiple diseases     121465466 (Spg11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:morg03400]     121465466 (Spg11) DNA repair and recombination proteins [BR:morg03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      121465466 (Spg11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  121465466 NCBI-ProteinID:  XP_041534634 LinkDB All DBs Position Unknown AA seq 2430 aa AA seqDB search MAAEPGPGSAASPGCAGAMERVLPVLLVQLPVEETAQLGARAQLHREQEALGSLTAAGNL RVLSLAPGSRGGSSCCLQGPFGHFVWEECRDHSISTDKPKLLAVREDYELRMYEFDLKDG RCESTLLHSCCGRTLQTLVEDRGVCISLESLRILSFHKTALLLINRCLVLRFAFPGRDSG SILDCFPLPLPSPAADTVIDVQFCRGFLFVLSTLHWIYIFDTSDGKQVARVDLALLLEDS EQQEAASIPSVTSLKVSQDLDVLVIISSSHSAVALNLNLYFRQHPGHLLYARTLEDLPIE GPTGTDEDDLANSVHNMSLTKVSFRVDRSWRAQLSALKETMSSKPEASCCAPWFQGVLRL ESLESGNPTPVMPSHVFIPGDATCGQCAFPQKEHIKTSDPRWWETMRLSRQEQPAELQCM SVTGFTALFAWAVGTSSCTIVLWDLETQGLQCLPLSQPCTPVDSSGDQQLCLVLTENGLC LILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFLK SKENLLTPSSKSPVSDHQLPSQLYLRQVEEMRPALDLLCSAIRESDSETQSKHFAERLLH LTLSFLNKQIRELFVHTEELDEHHQKGVDILTSYINELRTFMIKFPWKPADAPEDCDINK DVLTVKEGKIWEKLSFEGVIADAILNNKIPEAQTFFRITGHSAQQLEELVRIGLDLVFDS LKKNSVDKASTLLRNMGFNVEDELLRICFYTTDKNIRDLLVEILKGKECFSEKERRTIDF VHQVEKFYSGHFQENVQMHSFPSYWIKEQDYLKHKSVLDTFLKCDRIDEFSEKDHRIALN WARWWDQQTQECILFPRISPEEYKAYSPDALWRYLTARHDWSSISLWIEEFQTQETGPPQ QNKWPPLSVDVIDQNTCCNSYMRNKILDKLARNGVFLASELEDFELLLLRLSRIGGVMQD TLPVRSSSPLGGWDFHAHFILYCVEHSLQHLLYVYLDYYRLSPGNCPFLEKKELHEAHPW LEFLVQCRQVSSNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGHTLLALATTMYAPG GVSQVIQNEENENCLKKVDPQLLKVALTPYPKLKAALFPQGAAPSVLPSDVTLYHLLQSL PPFDPSRLFGWQSANTLAIGDTASHLPHFSSPDLVSKYAIVERLNYAYYLHHGRPSFAFG TFLVQELIKSKTPKQLIQQVGKEAYTLGLTSSHSPSVAAACVCFLELLGLSSLKLRVDMK MVNVILGYKCRNEDVHPSSVRESLAEKLTKLADGDKATTRELLVLLEEGVWNSVGQQGFS RLSSESSSQWALVLQFCMVHNMKLSLSYLRECAKANDWLQFLVHSQLHNYQPEEVNSLLQ YFSPVLQSHLKLAFEKLSSGSISQMDGDQDYKGHQELQQSKEETRDFFEILHQCSEESAS WCWLLAEAVRQRAPVLSVLAACLQGASAVPCLCVWIVTSVEDRVAAEAMGHIQASVEDHP WSLEDLSIIWRTVLTRQKSHTLIRGFQLFIKDSPLLLIMEMYELCMFFKNYEKAKVKLVE FQKSLETLDTAPARGLPVLPATWMKEQACFLLKLLPQQCETQYELGKLLQLLVGTEHLFS DGPDVQKLCVLSQILKDTPVAISPAVITSYSPENFQHECRSILEKLKADGQFAVARRVAE LAALPVDSLVIEQLTQEMETLKHTQKWSVKHTRIDFWKKCHENFKKNSISNRVASSFFSS QVPVVSEHPAEPGSLEERHLLLTLGGHWLAREEPVPLGELEELEKQAWICRITRLARGGG AEETQPGPSQQVSAGAELSFDILADEFSFSKLAALNTSKYLDLNGLPSKETCENRLNWKE QEALNALIGQLLDGGCVHEASRVCRYFHFYSQDVVLVLHSRALASAEAGVDDLHSDIRAL LPSAALPDDQESPSAPLRKVHSTSSLDSQSFMMAPSTDEVARSLRALTSKCLRGKNYCRQ VLCLYELAKELGCSYSDVAARDSEAMLRTILASQRPDRCRQAQVFISTQGLEPDTVAELV AEEVTRELLTSSEGTGEKQPLNPAEESQTLVQLTAVCQDRTLVGMKLLDRIPSVPHGELS CTTELLILAHHCFTSTCHMEGIIRVLQAARMLTDNHLAPKEEYGLVVRLLTGIGRYNEMT YIFDLLHQKHYFEVLMRKKLDPTGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGE NHEAAACIQLKLIESQPWEESLKDGPQLKQLLLKALTLMLDAAESYAKDSCVRQALHCNR LTKLITLQIHFLNTGQNTMLINLGQQKLMDCIMALPRFYQASIVAEAYDFVPDWAEVLYQ QVILKGDFGYLEEFKQHKLLRPSIFEDISKKYKQHQPTDKVTENLKKLLSYCEDIYLHYK LAYEHKFFEIVNVLLKDPQTGCCLKDMLAA NT seq 7293 nt NT seq  +upstreamnt  +downstreamnt atggccgctgaaccggggcccggaagtgctgcctcccccggctgtgccggggccatggag cgggttctgccggtgctgctggtgcagctccctgtcgaggagacggcgcagctcggagcg cgggcgcagctgcaccgagagcaggaggccctggggagcctgacggctgcgggcaatctc cgagtgctctcccttgcgccgggcagcaggggtggaagcagctgctgcctccaaggcccc tttgggcacttcgtatgggaggagtgtcgtgaccacagcatatccacagacaagcccaag ctgctcgccgttcgtgaggattatgaactgcgcatgtatgagtttgatttgaaggacggg cgatgcgagtcgaccttgttacacagctgctgtgggcggacactgcagacgcttgttgaa gaccgaggagtctgtatttccttggagtctctgagaattctgtcctttcataagacggcc ttactgctcatcaacagatgtctcgtcctccgcttcgcatttccagggagagactccgga agtatactggactgcttcccgctgcccttgccgtcaccggcagcagacacggttattgac gtgcagttctgcaggggatttctctttgttctgagtacattacactggatctatattttt gacacttcagatggcaagcaggtagctcgtgtggacttggctcttctcctagaggattct gagcagcaggaggcagccagcattccctccgtgacatcactgaaagtgtctcaggactta gatgttttggtgatcatcagttcatctcactctgcagttgctctgaacctaaatttgtat ttcaggcaacacccaggacacctactgtatgcaagaacactggaagaccttcctattgaa gggcctactggaacagacgaagatgaccttgctaactctgtccacaacatgagcctcacc aaggtctcctttcgggttgataggtcttggagggcccagctgtcagcactgaaggaaaca atgagctccaagccagaggcttcctgttgtgctccgtggtttcagggtgttttgcgtttg gagtccctggaatctggtaaccccactcccgttatgccaagccacgttttcattccaggg gatgccacgtgtggccagtgtgcttttccgcagaaggagcacatcaagactagtgaccca agatggtgggagacaatgcggctgagcagacaagagcagcccgcggagctccagtgtatg tctgtgacgggatttactgcactgtttgcttgggcagtaggaaccagcagctgcaccatt gtcctctgggacctggagacccagggcctgcagtgtcttcctctcagccagccgtgtact cctgtcgatagcagtggggaccagcagctgtgccttgttctgacagaaaacggactctgt ctgattctgtttggtctcactcaagaggagtttctgaaccgactgatgatccatggcagt gccagcaccgtggactccctttgccatctcaacggctggggacgctgctccattcctata cacgctctagaggctggcatagaaaatcggcagctggatacagtagatttcttcctgaag agcaaggaaaatcttcttactccgtcatcaaaatctcccgtttctgatcatcagcttcca tcccagttatatttaagacaggtagaagagatgagaccagcactggatttgctctgctcg gcaatcagagaaagcgactctgagacccagagcaagcacttcgcagagcggctgcttcac ctcacactctccttccttaacaaacagatacgggagcttttcgtgcacactgaagagcta gatgagcatcaccagaaaggagtggacattttgaccagctacatcaatgaacttcggact ttcatgataaagtttccttggaagccagcagacgcccctgaggactgtgacataaacaaa gatgtcctcacagtaaaggagggcaaaatttgggaaaaactcagctttgagggagttatt gctgatgccattttaaataacaagataccagaggcgcagactttcttcaggattactggt cattctgctcaacaactggaggagctggtcaggataggcctagatttggtgtttgacagt ttgaaaaagaacagtgtagataaagcctccacgctcttgaggaatatgggcttcaatgtg gaagatgagttgctcaggatatgcttttatacaactgataaaaatatacgggaccttttg gttgaaattttaaaaggaaaagaatgtttttctgaaaaagaaagaagaactatagacttt gttcatcaagttgagaagttttattcaggacatttccaagaaaatgttcagatgcactcc ttccccagttattggataaaggaacaggactatttgaagcacaaatctgtcttggataca ttcctcaaatgtgatcgaatagatgagtttagtgaaaaggaccataggattgcactgaat tgggctcgctggtgggatcagcaaacacaagaatgcatccttttccccaggataagtcca gaagaatacaaagcatattctccggacgctctctggagatacctcacggctcgccatgac tggtcaagcattagcctgtggattgaagaatttcagacccaggagaccgggccccctcag cagaacaagtggcctcctctgagcgttgatgtcattgatcagaacacttgctgcaacagt tacatgaggaataagattttggacaagctggccaggaacggggtttttctcgcatctgaa ctcgaagactttgaactcctcctcctgagactcagccggattgggggcgtcatgcaggac accctccccgtgcgaagctccagccccttgggagggtgggacttccacgcccacttcatc ctctactgtgtggagcacagcctgcagcaccttctctacgtctatcttgactactacaga cttagccctggaaattgtccttttttggaaaagaaagaactacatgaagctcatccttgg cttgaatttttggttcagtgtcggcaagtttccagtaacttaacagatcccaaactgatc ttccaggccagccttgcaaatgctcaaattttgattcccaccaatcaggccagtgtgagc agtatgctcttggaaggacacaccctcctggccctcgctactaccatgtatgctcctggg ggtgtcagccaggtcattcagaacgaagaaaatgagaactgtttgaagaaggtggacccc cagctcctgaaggtggctttgacaccttacccaaagctgaaagccgccctcttcccacag ggcgccgctcccagtgtcctgccctctgatgtcacactctaccacctccttcagtctttg ccgccctttgatcctagcagattgttcggctggcagtctgccaacacactggcaatagga gatacagccagccatctcccacatttttccagccctgacctggtgagtaaatacgccata gtggagcgtctaaattatgcgtattatttacatcatggacgcccatcgtttgcctttggc actttcctggtccaggagttgatcaagagtaagactcccaaacaactgatccagcaagtg ggcaaggaggcctacaccttagggctcacttcctcccacagcccttcggtagcggctgcc tgtgtgtgcttcttagagttgcttggtcttagcagcctcaagctcagagttgacatgaaa atggtgaatgtgattctgggctacaagtgcagaaatgaagacgttcaccccagttctgtc agagagtctctagctgagaagctgactaagcttgctgacggtgacaaggccaccaccaga gagctgctcgttcttttggaagaaggcgtgtggaacagcgttgggcagcagggtttcagc aggttgtccagtgaatccagcagccagtgggcattagtgttacagttctgcatggtccac aatatgaagctgagcctgtcctaccttagagaatgtgccaaggcaaatgattggctgcag ttcctggttcacagccaactccataactaccaaccagaagaggtgaactctctcctccag tacttcagccctgtccttcagagccacttgaagctggcttttgagaaactgtcatcagga tccatctctcaaatggacggggaccaagactacaagggccaccaggaactccaacaaagc aaagaagagacaagggatttctttgaaattctccaccagtgctcggaggagtcagcctcc tggtgctggcttctggctgaggcagtgagacaacgggctcctgtcctcagtgtcctggcc gcttgtctccagggtgccagtgctgtcccctgtctgtgtgtttggattgtcacctctgtg gaggacagggttgcagctgaagcaatgggacacatccaggcctctgtagaggatcatcca tggagccttgaggacctgtccattatctggagaactgtgttgacaaggcagaagagccac accctcatccgaggcttccaacttttcattaaggattcgccccttctattgattatggag atgtacgaactgtgtatgttcttcaagaattacgagaaagccaaagtcaagcttgtggag tttcagaaaagccttgagacgcttgacacagctcctgcaaggggccttcctgtcctccct gccacatggatgaaggaacaggcgtgtttccttttgaaactcctgccacagcagtgtgag acacagtatgagctggggaagctcctccagctgcttgttggaactgagcacctcttttcc gacggcccagacgtgcagaagctgtgtgtgctcagccagatcttgaaggatacacctgtg gccatcagccctgcggttattaccagctacagccctgagaatttccagcacgagtgtaga tctattttggaaaagctgaaggcggatggacagtttgctgtggccaggagagtggcagag ttagcagcgttgcctgtggacagcttggtcattgagcagctaacccaggaaatggagacc ctaaaacacactcagaagtggtccgtcaaacacacaagaattgacttctggaaaaaatgc catgaaaactttaagaaaaactccatttcgaacagagtggcctcttccttcttctccagc caggtccctgtggtgagtgagcatcctgctgagccaggcagcctggaggagcgccacctg ctgctcacgctgggggggcactggctggcccgggaagagcctgtccccttgggagagctg gaagagctggagaaacaggcctggatctgccgcatcacccggcttgcccgtggagggggc gcggaggaaacccagcccggcccctctcaacaagtgtcagctggcgctgaactatccttt gatatcttagccgatgagttttccttctccaagcttgctgctctgaacacatccaaatac ttagaccttaatggtcttccatccaaagagacgtgtgagaacagactgaattggaaggag caggaagcactgaatgctctgatcggacagctgctggatggcggctgtgtgcacgaagca agcagggtgtgccggtatttccacttctacagtcaggatgtggtactggtgctgcactct agagccttggcgtccgcagaggccggcgtggacgacctgcactcagacatccgagctctc ctcccaagtgctgcgctgcctgacgaccaagagagccctagtgcccctctccggaaagtc catagcacttcgagtttggacagtcagtcatttatgatggcgccctctaccgatgaggtg gcgaggagtctccgcgctctcaccagcaagtgcctccgcgggaagaactactgccggcag gtcctctgtctgtatgaacttgccaaggagttgggctgctcctattctgatgttgcagcc agggacagtgaagccatgctgcgaacaatcttggcttctcagcggcctgaccgatgcaga caagcccaggtctttatcagcacccaaggcctggagccggacactgtggctgaactggtg gctgaagaggtgacccgagagctgctgacctcatcggagggaacaggagaaaagcagcct ctcaacccagcagaggaaagccaaacacttgttcagctaactgctgtgtgtcaagaccgc acactggtaggcatgaagttgctggacaggattccgtctgtcccccacggggagctgtcc tgcaccacagagctcctcatcctggcccaccactgcttcacctccacgtgccacatggag ggcatcatcagagtcctacaggccgcccggatgcttacagacaaccacttggctcccaag gaggagtacgggctggtggtacgcctcctcaccggcatcggaaggtacaatgagatgaca tacatatttgacttgctgcatcaaaagcactattttgaagttctgatgaggaagaagcta gatccgactggcaccctgaagacagccttgctagactacatcaaacgctgccgccctgga gacagcgaaaagcacaatatgattgccctgtgcttcagcatgtgccgggagataggggag aatcatgaggcggcggcttgtatccagctgaagctgattgagtcccagccctgggaggaa agcctcaaggatggaccccaactcaaacagctcctgcttaaagccctgactctgatgtta gatgcggcggagagttacgccaaggactcctgtgtgcgacaagccctacactgtaaccgg ctcactaagctgataacactgcagattcactttctcaacactggtcagaacacaatgcta atcaacttgggccagcagaagctaatggactgtatcatggctctacctaggttctaccag gcttctattgtagctgaggcctatgactttgttcctgactgggctgaagttctctaccaa caagtgattcttaaaggagactttggttacttggaagaatttaagcagcataagttacta agacccagtatatttgaagacatttccaaaaaatataaacaacaccagcctaccgacaag gtcacagaaaacctgaagaagttactctcatattgtgaagacatctacttgcattacaag ttggcatatgaacacaaattttttgaaattgtaaatgtgcttctgaaggaccctcaaaca ggatgctgtcttaaagatatgctcgcagcttag

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