Microtus oregoni (creeping vole): 121466384
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Entry
121466384 CDS
T08307
Symbol
Scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121466384 (Scaf8)
03041 Spliceosome [BR:
morg03041
]
121466384 (Scaf8)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121466384 (Scaf8)
Spliceosome [BR:
morg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121466384 (Scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
Motif
Other DBs
NCBI-GeneID:
121466384
NCBI-ProteinID:
XP_041535995
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MEAVKTFNSEGCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANSLTPLDQGVSFNKKLMDRFDFGEDSEHSEES
KKEIPTPQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKVTPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDVVEEEIFEPEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPVRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDSFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLDGFAEGGMIDQETVNAEWETVKASEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPAIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGGSVASNLAPSTLPAGNVFNP
PNKAEPEDKVPHLAEHQIPSGENTRPVIPNDIPSSAAMLAQPPGPANTSGILCVQRPNVS
SNSEILGVRPANVSSSAAIIGAQPPNILNNSGMLGIQPPNVSSGSGLLGVLPPNLPNNSG
LVGLQPPNVTNPAGLLGTQPPIGPQNLPPLTMPAQRMPALPMLDIRPGLIPQAPGPRFPL
LQPGIPPQRGIPPPSVLDAPLHPPPRGPFPPGDLFSQPERPFLAPGRPSLDNVPNPDKRI
PLGNDSIQQEGDRDYRFPPVETREGITRPPPVDVRDVVGRPVDPREGPGRPPLDGRDHFG
RPPVDMRENLVRPGLDHLGRRDHFGFPPEKPWGHRDFDEREHRVLPVFGGPKGLHEERGR
FRAGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDR
IQNTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHVQPPPLPVQKDPELYDKLAS
AGDVDKEESGTVAGVESEAVVVESTETEGT
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaacagcgagggttgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattatattcgctgaatgactataaacca
cccatttctaaagcgaaaatgacccagattacaaaggcagccatcaaagctattaagttc
tataaacacgtggtacaaagtgttgagaaattcattcagaagtgtaaaccagaatacaag
gtacctggactgtacgttattgactccattgtgcgacaatcccggcatcagtttggccaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaag
aataatgtttttaagagtgagattatccagcctcttctggatatggcagcaggaattcct
cctccagttgtcacccctgttttggccagcaccactgcagccatgagcaatactccagga
acccctgtgacacctgttactccagccaatgtggttcaaggcttacctgatccatgggtt
tctcagataacaaacacagacacattggcagccgttgctcagatcttacaaagtcctcaa
ggtcagcagcttcagcagctaatacaaaccttacagatccaacagcagaagccccagcct
tccatcctccaggccttggatgctggtcttgtggttcagttgcaggcacttacagcacag
cttacagctgcagctgcggcagccaactcgcttacacccttggatcagggtgtctctttc
aacaagaagttgatggataggtttgactttggggaagattctgagcacagtgaagaatcc
aaaaaggaaattcctactcctcaactttctcatgtttccgaatctgtgaacaactccatc
ttccatcagatagcagagcagctgcagcagcagaacctggagcacctgcggcagcagctt
ttggagcagcagcagccccagaaggtgactcctcaagatagccaggagggaacatttggg
tcagaacattcagcgtcaccctcacaaggaagtagccagcagcattttctggaacctgaa
gctaatttggatgactctatagacattcagcaacaggatatggatatcgatgaaggacaa
gatgttgttgaagaggagatctttgaaccagaagctaagaaagtagctgttcgctcaaga
tcaagaactcattcgcgatctcgatcaagatctccaagaaaacgaaggtccaggtcgcga
tctgggtctcgaaagcgaaaacataggaagcgatcccgctcccgctcaagagaaagaaag
agaaaatcatcacggtcgtattcaagtgaaagaagagccagagagagggagaaagaacgg
cagaaaaagggcttgcctcctgttcgatcaaaaaccctaagtgtatgcagcactaccctt
tgggttggccaagtggataagaaggctacacagcaagatttaaccaacctttttgaggag
tttggacaaattgaatctattaatatgattccacccaggggctgtgcatatgtctgtatg
gttcaccgacaagattcatttcgggctcttcagaaactgagttcaggatcctataaaatt
ggttccaaggtcatcaagattgcctgggctttgaacaaaggtgtaaagacggaatacaaa
cagttctgggatgtagatcttggagtcacatatataccctgggaaaaagttaaagtggat
gatttggatggctttgcagaaggaggcatgatagatcaggaaactgtaaatgctgaatgg
gaaactgtgaaagcctcagaacccgttaaagaaacggtccagactacacagagtccaact
ccagttgaaaaggagacagtggtcacaacacaggcagaggttttccctccacctgtggcc
atgctgcagattccagtagcaccagcggttcctgcagttagtttagttccaccagcgttt
cctgtgtcaatgccggtccccccgcctggattcagcccaatccctccacctcctttccta
cgagcaagttttaacccttcacagccacctcctggttttatgccacctccggttccccca
cctgtggtacctccccctgcaattccaccagtagtaccaacatctttagtgcaaccacca
ttgtccatgaccccagaaactgtgaaagatgttggatttggtagccttgtcttaccaggt
ggttctgttgccagcaatcttgctccttcaactctaccagctggaaatgtttttaatcct
cccaataaagcagagcctgaagacaaagtacctcaccttgcagaacaccagattccttct
ggtgagaacaccagaccagtgattccaaatgatattcccagtagtgctgcaatgttagca
cagccacctggccctgcaaacacctctgggatcctgtgcgtgcagagaccaaatgtgtca
agtaattctgaaattctgggggttcggccagctaatgtttccagtagtgctgcaattatc
ggagcacagccaccaaatattctaaataactctggaatgttgggcatacagccaccaaat
gtgtcgagtggctctggacttcttggagtactgcctccaaatttgcctaacaactctgga
cttgtaggactacagccaccaaatgttacaaatcctgctggacttttgggaacacaacca
ccgattggacctcaaaacttacctcccttaactatgccagctcaaaggatgcctgcattg
ccaatgttggatatccgtccaggacttataccacaggctcctggaccaagattcccttta
ctacagcctggaattcccccacaacggggtatccctcccccatcggtacttgatgcacct
cttcatccgccaccccgtggaccttttcctccaggagatcttttcagtcagccagaaaga
ccttttctggctcctggaagaccaagtctagacaatgttcccaacccagataagcgaata
ccacttgggaatgacagtattcagcaggaaggggatagagactaccggtttcctcctgta
gaaacaagggagggcattactagacctcccccagtggatgttagggatgttgttgggcga
cctgtagaccccagagaaggtcctggaaggcctccattagatggtagggatcactttgga
agacctcctgtggacatgagagagaatcttgtgaggcccggtctagatcatcttggtaga
agagatcactttggctttcccccagagaaaccttgggggcatagagattttgatgagaga
gagcatcgagttttgcctgtctttggtggtccaaaaggcttgcatgaagaaagaggtaga
tttcgggctggaaattaccgatttgatcctagaagtggtccttggaacaggggatttgga
caagaagttcacagagatttcgatgaccgcagaagaccctgggagaggcaaagggatagg
gatgacagagattttgatttctgcagagaaatgaatggaaaccgtcttggacgagataga
attcaaaacacttgggtcccccctcctcacgctcgggtttttgattatttcgaaggggcc
acttctcaacggaaaggcgataatgtgcctcaagttaacggtgaaaatacagagagacat
gttcagcctccgcccttaccagtacagaaggaccctgaactctatgacaaactggcatct
gcaggtgacgtagacaaggaggagagcggcacagttgctggtgtagaaagtgaagcagtg
gtggtagagagcacagagactgaggggacataa
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