Microtus oregoni (creeping vole): 121466553
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Entry
121466553 CDS
T08307
Symbol
Afdn
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04014
Ras signaling pathway
morg04015
Rap1 signaling pathway
morg04024
cAMP signaling pathway
morg04517
IgSF CAM signaling
morg04520
Adherens junction
morg04530
Tight junction
morg04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
121466553 (Afdn)
04015 Rap1 signaling pathway
121466553 (Afdn)
04024 cAMP signaling pathway
121466553 (Afdn)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121466553 (Afdn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121466553 (Afdn)
04530 Tight junction
121466553 (Afdn)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
121466553 (Afdn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
121466553
NCBI-ProteinID:
XP_041536243
LinkDB
All DBs
Position
Unknown
AA seq
1915 aa
AA seq
DB search
MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPAKKAQSNGPEKQDKEGVIQNFKRTLSKKEKKEKKKREKEALRQ
ASDKEERPSQGDDSENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDSADFAVAESLEKYGLEKENPKDYCIAR
VMLPPGAQHSDERGAKEVILDDDECPLQIFREWPSDKGILVFQLKRRPPDYIPKKMKKHV
EGKPLKGKDRVDGSGYGSVLPPEKLPYLVELSPGRRNHFAYYSYHTYEDGSDSRDKPKLY
RLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRISE
TTMLQSGMKVQFGTSHVFKFVDPIQDHVLSKRSVDGGLMVKGPRHKPGAVQETTFDLGGD
IHSGTALPASRSSTRLDSDRMSSASSTAERGMVKPMIRLDQEQDYRRRESRTQDVVGPEL
ILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQHRPDISPAER
THKAIAVVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRIT
LDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSL
LRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEK
QGLELAADCHLSRIVQATTLLTMDKYVPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEP
VIPTDLIESVVAVAENTADELARSDGRDVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGL
QEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTL
KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQE
RAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELY
NNSAQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSPYASG
TAAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPNY
EEKPHMHTESNHSSIAIQRVTRSQEELREEKVYQLERHQVEAGMDRKCDSDMWINQSSSV
DSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAVLPTPVAVSQPIRTDLPPPPPPPP
VHYTSDFDGIPVDLPLPPPPTNQVGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERK
RREQERKLGQMRTQSLNPASFSPLATLTKPEKPSTLQRPQETVIRELQPQQQPRTIERRD
LQYITISKEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDMLSKEIHELQNKVDRTAEES
DRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTAMPAISVL
DLLQDEERRRQQQLEEMRKREAEDRVRQEEDRRHQEEERVKRDAEEKRRQEEGYYSRLEA
ERRRQHDEAARRLLEPEDPGLSRPPLPRDYEPPSLSPAPSAPPPPPQRNASYLKTQVLSP
DSLFTAKFVAYDDEEEEDCGPTGQDKYPSTRKSHEHLPLAAPKPQQPRPASDGIFLSNSF
QPPLAKANSTANKAGPPPPPPGKPSFYRPGHWKGRGPHSSYTGSAGTILGAHDASRDPRE
KHMRSQEADSPGSSGAPENLTFKERQRLFSQGQDVSDKVKASRKLTELENELNTK
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggtggccgcgacgaggagcggcggaagctggccgacatcattcaccattgg
aacgccaaccggctggacctgttcgagatcagccagccgaccgaggatctggagtttcat
ggagtcatgagattttattttcaagataaagctgctggaaacttcgcaacaaaatgcatt
cgggtatctagcacggcaaccactcaagatgtgattgaaacactggcagagaagttccgc
cctgatatgcgcatgctgtcctctcccaaatattccctctatgaagtgcatgtcagtgga
gaagaaagaagattagacattgatgagaaacctctagttgtgcagttgaactggaacaaa
gatgatcgggaaggtagattcgtccttaagaatgagaatgacgccattcctgccaagaag
gctcagagtaatggacctgagaagcaggacaaagaaggcgtcattcagaacttcaagaga
actctttcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcactgagacaa
gcctctgataaggaagaaaggccttcacaaggggatgacagcgagaattctcgactggct
gctgaagtttacaaagacatgcctgaaacgagctttactcggacaatttctaatcctgag
gtagtaatgaaacggcggcggcagcaaaaacttgagaaaagaatgcaagagtttcggagc
tcagacgggcggcctgactcaggtggaacattgagaatatatgcagatagtttaaaacca
aatattccatacaagacaatcctgctgtctactacagattctgcagactttgctgtagcg
gaatctctggagaagtatggtctggaaaaagagaatcccaaggactactgcattgcccgg
gttatgcttccccctggagcccagcattctgatgaaagaggtgctaaggaagttattctt
gatgatgacgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggatttta
gtctttcaactgaagaggagaccaccagactatatcccaaagaaaatgaagaaacacgtg
gaagggaagccgctgaaggggaaggacagagttgatgggtctggctatggttctgttctt
cctcctgagaaactaccctacttagtagagttaagccccgggagaaggaatcactttgcg
tactacagctatcacacctatgaagatggttctgactccagagacaagccaaagttatac
cgccttcaattaagtgtgactgaagttgggacagagaagtttgatgacaattctatccag
ttgtttggcccagggattcagccccatcactgtgatctcacgaacatggatggagtggtc
actgtgactcccagaagtatggatgcagagacctacgtggatggccagcgcatctcagag
actaccatgctgcagagtggcatgaaagtgcagtttggcacctcacacgtgttcaagttt
gtggaccccatccaggaccacgttctttcgaagagatctgtggatggaggcctgatggtc
aagggcccaagacataaacctggagctgttcaggagacaacctttgatttgggaggagat
attcacagtgggacagcattgccagcaagcaggagctcgactagactggacagtgacagg
atgtcctctgcctccagcaccgctgagcgagggatggtgaaaccaatgatccgattggac
caggagcaggattatcgccgaagagaaagcagaacccaggatgtggttgggcctgagctg
atcctgcctgccagcattgaattcagggaaagctcggaagattcttttttgtccgccatt
ataaactataccaatagctctacagttcactttaagttgtcgccaacatatgtgctgtac
atggcatgccggtatgtattgtccagccagcacaggcccgacatcagccctgccgagcgc
acacataaggccatcgctgttgtcaacaagatggtgagcatgatggaaggggtcatccag
gaagtagaccaggttgatcagaaacaaaagaacattgccggggcacttgctttctggatg
gcaaatgcatctgaacttctcaacttcatcaagcaggaccgagaccttagtcggatcaca
ctagatgcccaggatgttttggcacacttggttcagatggcatttaagtacttggttcac
tgtcttcagtcagagcttaataactacatgccagcctttctggatgatcccgaggagaac
agtctgcaaagaccaaaaatagatgacgtgctgcatacactcaccggagccatgtccttg
ctgaggcgctgcagggtcaatgctgccttgaccatccagctattctcccagctcttccat
tttatcaatatgtggctgttcaacagattggtgactgacccagattcaggcctgtgttct
cactactggggagcaattatccgccagcagctggggcatattgaagcctgggcagagaag
cagggactagagctggcagctgattgtcacttgagcaggattgtgcaggctactactttg
cttaccatggataagtatgtgcctgatgacattccaaatataaacagcacatgctttaag
ttaaattctctgcaacttcaagccttattacagaattaccactgtgcacctgatgagcct
gttatccctacggatctcatagaaagtgttgtggctgttgctgagaacacagctgatgag
cttgcccgcagtgatggcagagatgttcagttggaggaggaccctgacctacagctacct
tttcttttgccagaagatggatattcctgtgatgttgtcagaaacattccaaatggttta
caagaatttttagaccctctgtgccagagaggattttgcaggttgattcctcatacacgt
tcaccaggtacttggacgatatattttgaaggtgcagattatgaaagtcaccttatgcgt
gagaacacagaactggcccagcctctgcggaaggaacctgaaataatcactgtgacccta
aaaaaacagaatggaatgggcctcagcattgtagcggcaaagggtgctggccaggataaa
ctgggaatctacgttaagtctgttgtgaaaggaggcgctgcagatgtggatggacgtcta
gctgctggtgaccagctcctcagtgtggatggacgaagtctggttggactttctcaggaa
agggccgcagaactcatgacaagaaccagttccgtggtcacacttgaagttgcaaagcaa
ggcgccatctatcacggcctggccaccctccttaaccagccatcccccatgatgcagaga
atttcagatcgtcgtggctcaggtaaacccagaccaaagagtgaaggttttgagctctat
aataattcagctcaaaatggctccccagagagtcctcagctgccttggacagagtacagt
gagccaaagaaacttcctggtgacgacagactgatgaaaaacagagctgatcaccgttcc
agccccaatgtggcaaatcagcctcctagccccggagggaagagtccatatgcttctgga
acagcagctaagataacatctgtctctactggaaacctctgcactgaggagcagactcct
ccacctagacctgaagcctatcccatccctactcagacgtacaccagagagtattttacc
tttccagcttcaaaatcccaggatcggatggcccctcctcagaaccagtggccaaattat
gaagaaaagcctcatatgcacacagaaagtaatcattccagtattgcaatccagcgtgtt
acccgttcccaggaagagcttcgagaagagaaggtttaccaacttgagcggcatcaagta
gaggctggcatggatcgcaagtgtgacagtgatatgtggatcaatcagagctcctcagtg
gactccagcacatccagccaagagcacctgaaccattcctccaagtcagtcacccctgct
tccactctgaccaaaagtggtcctggacgttggaaaaccccagcagcagttctacccacc
cctgtcgctgtctcccagcccattcgaacagacctacctccaccaccccctccacctcct
gtccactacaccagtgattttgatggcattccagtggatttgcccctcccacctcctcct
accaaccaggtaggaccccagtctgctcaggtggctgctgcagagcggaaaaagagagaa
gaacatcagcggtggtatgagaaagagaaggcccgcctcgaggaggaacgggaaagaaag
cgcagggagcaggagcggaagttggggcagatgcgcacacagtccctgaaccctgcttcc
ttctctcctttggccacactgaccaagccagaaaagccttccacattgcagaggccccaa
gaaacagtcattcgggagctgcagccccagcaacagccccgcacgattgagcgcagggac
ctgcagtacatcaccatcagtaaagaagaactgtcttctggtgatagtctgtctccagac
ccctggaaacgagatgccagggagaagctggagaagcaacagcagatgcacattgtggac
atgctgagcaaggagatccatgagctgcagaacaaggtggaccgcactgcagaggagagc
gaccgcctgcggaagctcatgctggagtggcagttccagaagagactgcaggagtccaag
cagaaggatgaggatgatgaggaagaggaggatgatgatgtggacaccatgctgatcatg
cagcgtctggaggctgagcgcagagccaggcagactgctatgccagcaatctctgttcta
gatttgttgcaggatgaggagcgcaggcgccaacagcagttggaagaaatgcgcaaacga
gaagcagaagatcgtgtgagacaagaggaagaccgccgccatcaggaggaggagcgagta
aagagagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctagaagct
gagaggcgcagacagcacgacgaggcagcacgcaggttgctggagcccgaagatcctggg
ctgagccgacctccacttccacgggactatgagcccccatccctgtccccagcacccagc
gcccctcctcccccacctcagcgaaacgcctcctacctcaaaacacaggtcctctcccca
gattcgctgttcactgccaagtttgttgcctatgatgatgaggaggaggaggactgcggc
ccaacaggtcaggataagtaccccagcacaagaaagtctcatgagcatcttcctcttgct
gcccctaagccgcagcagccacgcccagcctcggatggcatctttctctccaactcattc
cagccacccttggccaaagccaacagtaccgctaacaaagcaggcccacccccaccccct
ccaggcaaaccaagcttctaccggcctggccactggaaaggtagaggaccgcactcttct
tacacaggatctgcaggaacaatcttgggagcccatgatgcttcccgggacccaagagag
aagcacatgagaagccaagaagcagactcacctggcagttctggagcccctgaaaacctg
acatttaaagagcgtcagcgcctcttttcacaagggcaagatgtgtctgacaaagtaaaa
gcttctcgtaaattaacagaacttgagaatgagctgaacaccaagtga
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integrated database retrieval system