Microtus oregoni (creeping vole): 121466654
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Entry
121466654 CDS
T08307
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121466654
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
morg01007
]
121466654
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
morg03016
]
121466654
Enzymes [BR:
morg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
121466654
Amino acid related enzymes [BR:
morg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121466654
Transfer RNA biogenesis [BR:
morg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121466654
Prokaryotic type
121466654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
121466654
NCBI-ProteinID:
XP_041536388
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MSILYVSPHPDAFPSLXALIAAHYREASNXPGWGDPHPCICLQPPPSSRTPLLPPRLPAL
EQAPRGLWVWGAPAVAQLLWPAGLEGPWGSPAAVLVQQWVSYADTELVPAACGATLPALG
LRSPGQDPQAALGALGKALSPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPTV
RRIWGNVTRWFNTCVRQPEFRAVLGEVVLYSGARSVPQQPGLEITAPPKTAAQLKKEAKK
REKLEKFQQKQKAQQQPPPGEKKPKPEKKEKKDPGVITYDLPTQPGEKKDVSGTMPDSYS
PQYVEAAWYPWWERQGFFKPEYGCPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQ
DCLTRWHRMRGETTLWNPGCEHACIATQVVVEKKLWREQGVNRHQLGREAFLQAVWKWKE
EKGDRIYHQLKKLGSSLDWDRACFTMDPKLSVAVTEAFVRLHEEGVIYRSTRLVNWSCTL
NSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETM
LGDVSVAVHPKDSRYQHLKGKSVIHPFLSRSLPVVFDDFVDMEFGTGAVKITPAHDQNDY
EVGQRHGLEAISIMDSKGALYSVPPPFLGLPRFEARKAVLAALKERGLFRGIKDNPMVVP
LCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCI
SRQLWWGHRIPAYFITVHDPAVPPGEDPDRRYWVSGRTEAEAREMAAREFGVSVHKISLQ
QDEDVLDTWFSSGLFPFSILGWPNQSEDLNVFYPGTLLETGHDILFFWVARMIMLGLKLT
GRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPTEVEK
AKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFAL
RGLGKSFLPLQTSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYE
LCDVYLECLKPVLNGVDEAAAECARQTLYTCLDVGLRLLSPFMPFITEELFQRLPRRTPA
APASLCVTPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRTRPDCFLKVADE
ATGALASAVSGCVQVLASAGVVAVPALGAPAPQGCAVAVASDRCSIHLQLQGLVDPAREL
SKLRAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEAKLQQTEAELRKVDEAIALFQ
KML
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcaccccgacgccttccccagcctctgagccctcatc
gccgcccactaccgggaagcaagcaacngccccgggtggggagacccgcacccctgcatc
tgcctgcagcctccgccgagcagccggactcctctgctgccgcctcgcctgcccgccctg
gagcaggcgccccgcgggctgtgggtgtggggcgccccggctgtggcgcagctgctgtgg
ccggcaggcctggagggtccctggggcagcccggcggccgtcctcgtccagcagtgggtc
agctacgccgacaccgagctagtgccggcggcctgcggggcgacactgcccgcgctggga
ctccggagtccggggcaggatccccaggctgccctgggtgccctgggcaaggccttgagc
cccttggaggactggcttcggctgcacacctacctggccggggatgcgcccactctggca
gacttagctgccgtgacagccttactgctgcccttccgatatgttctggaccccactgtc
cgccggatctggggtaatgtgactcgctggtttaacacttgtgtccggcaaccggaattc
cgggctgtgctaggagaagtggtcctgtattcgggggccaggtctgtccctcaacagcca
ggtcttgaaatcactgcacccccaaaaacagctgctcagctcaagaaagaagcaaagaaa
cgggagaagctagagaaattccagcagaagcagaaggcccagcagcagcccccaccaggg
gagaagaaaccaaaaccagagaagaaggagaaaaaggaccctggggtcattacctatgac
ctccctacccaacccggggaaaagaaagatgtaagtggcaccatgcctgactcctacagc
cctcagtatgtggaggctgcctggtacccttggtgggagcgtcagggcttcttcaagcca
gagtatgggtgtcctagcgtgtcagcaccaaatccccgaggggtcttcatgatgtgcatc
ccaccccccaacgtgacaggctctctgcacctgggccacgcgctcaccaatgccatccag
gactgcctgactcgatggcaccgtatgcgtggggagaccaccctgtggaacccgggctgt
gaacatgcatgcattgccacccaggtggtggtggaaaagaaactgtggagagagcagggt
gtgaaccggcaccagctgggccgtgaggcctttctccaggcggtctggaagtggaaggag
gagaagggtgacaggatttaccaccagttgaagaaacttggcagctccttggactgggat
cgagcctgtttcaccatggaccctaaactgtcagtagcggtgacagaggctttcgttagg
ctccatgaagaaggtgtcatctaccgtagcacccgcctggtcaactggtcctgcaccctc
aattctgccatttctgacattgaggtggataagaaggagctgacgggtcgcaccctgctc
tctgtgcctggctacaaggagaaggtggagtttggggtcctcgtgtcctttgcctacaag
gtccaaggctcagacagtgacgaggaagtggtggtggcaacaactcggattgagacaatg
ctgggagacgtgtctgtggctgtgcaccccaaagactccaggtaccagcacctaaaggga
aagagtgtcattcatccgttcttgtcccggagcctccctgttgtcttcgatgactttgtg
gacatggagtttggcacaggtgccgtaaagatcacccctgcccacgaccagaacgactat
gaggtcgggcagcggcatgggctggaggccatcagtatcatggactcaaagggggcgctt
tacagtgtgccaccgcctttcttgggcctgcccaggtttgaggctaggaaggcagtgctg
gctgcactgaaggagcggggactgttccgtggcatcaaggacaaccccatggtggtgccg
ctttgcaaccgctccaaggatgtggtagaacctctactaaggccacagtggtacgtgcgc
tgtggggagatggctcaggccgccagtgcggctgtgacccggggcgacctccgtatcctg
cctgaggcccatcagcggacttggcattcttggatggacaacattcgagactggtgcatc
tctcggcagctgtggtggggccaccgaatccctgcctactttatcaccgtccacgaccca
gctgtaccccctggtgaggaccctgacagacggtactgggtgagtggacgcacggaagca
gaggccagagagatggcagcacgcgagtttggcgtgtccgttcacaagatcagccttcag
caagatgaggatgtattggacacctggttctcttctggtctctttcccttttccatcctt
ggttggcccaatcagtcagaagaccttaatgtgttctaccctgggaccctgctggagacg
ggccatgacatcctcttcttctgggtggcccggatgatcatgctcggcctgaaactcaca
ggcagactgcccttcagagaggtctatctccacgcaatcgtgcgtgatgctcacggtagg
aagatgagcaagtctcttggcaatgtcatagaccccctggatgtcatccatggagtttct
ttgcagggcctccatgaccaactattgaacagcaacctggaccccactgaggtggagaaa
gccaaagaaggacagaaggccgacttcccagcagggattcccgagtgtggtacagatgcc
ctgcgctttggactctgtgcctacacatcccaaggtcgagatatcaacctggatgtaaat
aggatcctggggtaccgccacttctgcaacaaactctggaatgccacaaagtttgccttg
cgtggcctggggaagagtttcttgcccttgcagacctccaagcctgaagggcatgagagt
ttggtggaccgctggatccgcagccgactcactgaggccgtgaggctcagcaatgaaggt
ttccaggcctacgattttccggccatcaccaccgcccagtacagcttttggctctatgag
ctctgtgacgtctacttggaatgcctaaaacccgtgctgaatggagtggatgaggcagca
gcggaatgtgcccggcagaccctctatacctgcctggatgttggcctgcggctgctctca
cccttcatgcccttcatcacggaggagctgttccagaggctgccccggcggacaccagca
gctcccgctagcctgtgtgtcaccccctacccagagccctcagagtgctcctggaaggac
cccgaggccgaagctgctcttgagctggcgctgagcatcacccgagctgtgcgctccctg
cgtgcggactacaacctgacccggaccaggcctgactgtttcttgaaagtagctgacgag
gccacaggcgccttggcatcggcggtgtcaggctgtgtgcaggtgctggccagtgcgggt
gtggttgctgtcccggccctgggggctcctgcaccacagggctgcgctgtggctgtggca
tcagaccgctgctccatccacctgcagctgcagggcctagtggacccagccagggagcta
agcaagctgcgggccaagcgaagtgaggcccagcgccaggctcagcggctgcaggagcgc
cgtgctgcctctggctactcagccaaggtgccccttgaggtccaggaggcagacgaggcg
aagttgcaacagacagaggcggaactcaggaaggtggatgaggccattgctctgttccag
aagatgctgtga
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integrated database retrieval system
