KEGG   Moritella sp. 24: HWV00_00305
Entry
HWV00_00305       CDS       T12108                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mori  Moritella sp. 24
Pathway
mori03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mori00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HWV00_00305 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mori03021]
    HWV00_00305 (rho)
   03019 Messenger RNA biogenesis [BR:mori03019]
    HWV00_00305 (rho)
Transcription machinery [BR:mori03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     HWV00_00305 (rho)
Messenger RNA biogenesis [BR:mori03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HWV00_00305 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 Mor AAA
Other DBs
NCBI-ProteinID: QUM74828
LinkDB
Position
68654..69919
AA seq 421 aa
MNLTELKNTPVSELVKLGESMGLENLARLRKQDIIFSILKAHAKSGEDIFGNGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVGGKIRPPKDGERYFALLKIDQVN
FDRPENSRNKILFENLTPIHPNERLRLERGNGSTEDITARILDLSAPIGKGQRGLIVAPP
KAGKTMLLQNIASSIALNHPDATLMVLLIDERPEEVTEMQRLVRGEVIASTFDEPANRHV
QVAEMMIEKAKRLVEHKKDVIILLDSVTRLARAYNTVTPSSGKILSGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNQELHLNRKIAERRVYPAIDF
TRSGTRREELLTDKAELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDQFFEAMKKQK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaattaaaaaacacaccagtttctgaacttgtaaaactgggcgaatct
atgggtctagaaaatctggctcgcttaagaaaacaagacatcatcttttctatcctaaaa
gctcacgctaaaagtggtgaagacatttttggtaatggtgttttagaaattttacaagat
ggctttggtttcttgcgttcagcagacagctcttatctcgccggccctgacgatatctat
gtatcaccaagtcagattcgtcgctttaacttgcgaacgggcgatacggtaggtggtaaa
atccgcccgcctaaagatggcgaacgctattttgccctgttaaagattgaccaagttaac
tttgaccgccctgaaaactctcgtaataaaatcctctttgaaaaccttactccaatccac
ccgaatgaacgtcttcgtttagaacgtggtaatggtagtaccgaagatatcactgcacgt
attcttgatttaagtgcaccgatcggtaaaggtcaacgtggtttaattgtggcaccaccg
aaagctggtaaaacaatgttattacaaaacattgcctcttcaattgcactaaatcatcct
gatgcgacattgatggttctacttatcgatgaacgtccggaagaagtaacagagatgcag
cgtttggttcgtggtgaagtaattgcttcaacatttgatgaaccagctaaccgccacgtg
caagttgcggaaatgatgatcgaaaaagcgaaacgacttgtagaacacaagaaagacgtg
atcatcttacttgattctgtaacgcgtctagcacgtgcttacaatacagtgacgccatca
tcaggtaagattttatctggtggtgttgatgctaatgcattacaccgtccgaagcgtttc
ttcggtgcagcgcgtaatgtagaagaaggtggttctttaactattatcgcaacagcattg
attgatactggttcgaaaatggatgaagtaatttacgaagaatttaaaggtactggtaac
caagagttacaccttaaccgtaaaattgctgagcgtcgtgtttatcctgcgattgatttc
actcgttcaggtacacgtcgtgaagaactattaacagataaagcagagctacaaaaaatg
tggatcctacgtaaaatcgtgcacccaatgggtgagattgatgcgatggaattcctaatt
gataagttagcaatgacgaaaaccaatgatcaattcttcgaagcaatgaagaagcaaaaa
tcataa

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