Moraxella sp. K02: MOXK02_05260
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Entry
MOXK02_05260 CDS
T10725
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mork Moraxella sp. K02
Pathway
mork03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mork00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOXK02_05260 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mork03021
]
MOXK02_05260 (rpoC)
03400 DNA repair and recombination proteins [BR:
mork03400
]
MOXK02_05260 (rpoC)
Enzymes [BR:
mork01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOXK02_05260 (rpoC)
Transcription machinery [BR:
mork03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOXK02_05260 (rpoC)
DNA repair and recombination proteins [BR:
mork03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOXK02_05260 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BFM98967
LinkDB
All DBs
Position
596109..600341
Genome browser
AA seq
1410 aa
AA seq
DB search
MKDLLDIMKSPADSGNQEFDSIQISLASPDTIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRRKFQGVICEKCGVEVTAAKVRRDRMGHIELASPVAHIWFLK
SLPSRIGLLLDMTLRDIERVLYFESYVVTDAGLTSLEKYQLLDDEDYFKALEEFGDEFTA
KMGAEAVQDLLRDIDVDLEIDQLREEIPNTGSETKLKKMSKRLKLLESFRDSNNKPEWMV
MTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFTYAKLLQNGIATTIKAAKKMVEREEPAVWDMLASVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLTLEAQL
EARALMMSTNNILSPANGEPIITPSQDVVLGLYYISRSHINAKGENMTFSNVKEVYRALG
TGDLSVNAKIKVRIEETTYDEEGNANTVTKMVDTVAGRCLIWNITPKGMSFDEVNKEMTK
KNIARLINSCYRKMGVKDSVMFADQLMYLGFAQATLSGVSIGMEDMLIPPTKNKIIEAAD
AEVREIESQFEQGFVTAGERYNKVIDIWSRTNDQIAKAMMDNLSQDTVVNSQGEAEKEKS
FNSIYIMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLSVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVAQDLVITQPDCGTDKGILMKPHIEGGEIIEQLADR
VLGRVTAKDVMSNKTGELAIPSGTLLDEHWVKVLDEHGIDEVWVRSVITCEVPHGVCSQC
YGRDLARGHRVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASAAAVENSIQVNKGGTV
RFQNLKSVSHADGHLVVVSRSAEISITDELGRERERYKAPYGSSILVADGTEVTPGQTIG
KWDPHTHPIITEVSGTARFSEITDGLTATMKIDEATGMSSYEILATKDRPSSGKDLRPAI
ILDTKEGKEVVYFLPQQTIIRVREGDEVTTGSILGRVPQESSGTKDITGGLPRVADLFEA
RRPKDHAIMAEMSGTVSFGKDTKGKNRFIITNDDGEVHEELIPKWRQINVFEGERVERGE
VIADGPQNPHDILRLKGETELANYIVNEVQDVYRLQGVKINDKHIEVIIRQMLRKVEVTD
GGDSSYFKGDQAEYADIVAMNKKLDEENKFPVKFDRLLLGITKASLATESFISAASFQET
TRVLTAAAVTGKIDDLRGLKENVVVGRLVPSGTGLAYHAQRLESGKTTATEATENQQLEA
LDTLFAENMEPASMSFEDKFAEEFNSQDAK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttattagacatcatgaaaagccctgccgactctggtaaccaagagttcgac
agcattcaaatttctcttgcctcacctgacaccatcaaatcttggtcgcatggggaagtt
aaaaagcctgaaaccatcaactatcgtactttcaaaccagaacgtgatggtcttttttgt
gccaaaatttttggacctgttaaagactacgaatgcttgtgtggtaaatacaaacgccgt
aaattccaaggcgtgatctgtgaaaaatgtggcgttgaagtgaccgccgccaaagtacgc
cgcgatcgtatgggtcacattgagctagcaagcccagttgcgcatatttggttcttaaaa
tcattaccaagccgtatcggtctattacttgatatgactttacgtgatatcgagcgcgta
ttgtattttgaaagctatgtagtgactgacgcaggtttaactagccttgaaaaatatcag
ttgctcgatgatgaagattacttcaaagctcttgaagagtttggtgatgagttcactgca
aaaatgggtgctgaagcggttcaagacttgctgcgtgatattgacgtggatttggaaatc
gaccagttacgtgaagaaattccgaatacaggttcagaaaccaaacttaaaaaaatgtca
aaacgcctaaaattgcttgagtcattccgtgattcaaacaataagcctgagtggatggta
atgacggtgttacctgtattgccacctgatttgcgtccattggtaccgcttgaagggggt
cgttttgccacttcagacttaaatgacttataccgccgcgtcattaaccgtaacaaccgt
ttaaaacgcttgttagagctcaatgcgcctgacatcatcgtacgtaacgaaaaacgtatg
ttacaagagtcagtggatgcgctgcttgacaatggtcgccgcggtcgtgcgattacaggt
agcaacaaacgtcctttgaaatctttagccgatatgattaaaggtaaacaaggtcgtttc
cgtcaaaaccttcttggtaaacgtgttgactattcaggtcgttcggtcattacagtgggt
ccatacctgcgtctacaccaatgtggcttgcctaaaaaaatggcacttgaactgttcaaa
ccctttacttatgccaaacttttgcaaaatggcatcgcgactactatcaaagccgctaag
aaaatggttgagcgtgaagaaccggcagtgtgggatatgcttgccagcgtgattcgtgaa
cacccagtgctactgaaccgtgcaccgaccctccatcgtttgggtttacaagcatttgag
cctgtactgattgaaggtaaagcaattcagctacatcccctagtttgtagcgcgttcaac
gccgactttgatggtgaccaaatggcggtacacgtaccgttaactttggaggcccagctt
gaagcccgtgccttgatgatgtcaaccaacaacatcttgtcacctgccaatggtgagcca
atcatcacgccatcacaagacgtggtattggggttgtattacatcagccgctcgcacatc
aatgccaaaggcgaaaacatgactttctcaaacgtgaaagaagtgtatcgcgcgctaggt
actggtgatttaagcgtcaatgcgaaaattaaagtacgtattgaagaaaccacgtatgac
gaagaaggcaatgccaataccgttaccaaaatggttgataccgttgcgggtcgctgttta
atttggaatattaccccaaaaggtatgagctttgatgaagtcaacaaagagatgactaag
aaaaacatcgctcgccttatcaattcttgctaccgcaaaatgggcgtgaaagacagcgtc
atgtttgctgaccaattgatgtatttgggttttgcccaagcgacgttgtcaggtgtatct
attggtatggaagatatgctcattccacctaccaaaaacaaaatcatcgaagcggcggat
gcggaagttcgtgagattgaaagccagtttgaacaaggcttcgtgaccgcgggtgaacgt
tataacaaagtcattgatatttggtcacgtaccaatgaccaaatcgccaaagcgatgatg
gataacctatcacaagataccgttgtcaatagccaaggtgaagcggaaaaagaaaaatcg
tttaactcgatttatatcatgtcggattcaggggcgcgtggtagtgccgcacagattcgt
cagttggcaggtatgcgtggtctgatggcaaaaccagacggctcgattattgaaacccca
attaaagctaacttccgtgaaggcttaagcgttttacagtactttatctcgacgcacggt
gcccgtaaaggtctagctgatacggcactcaaaacagcaaactcaggttacttaacccgt
cgtttggttgacgttgcacaagatttggttatcacccagcctgattgtggtaccgataaa
ggtatcttgatgaagccacacattgagggtggtgaaatcattgaacaattggctgaccgc
gtgctaggtcgagttaccgccaaagatgtgatgtcaaataaaacaggcgaactagccatc
ccatcaggtaccctgctggatgagcattgggtaaaagtacttgatgaacatggtattgac
gaagtttgggtacgttctgtgattacttgtgaagtgccacatggtgtctgttcacaatgt
tatggtcgtgacttagcacgtggtcaccgcgtcaatattggtgagtctgtgggtgtcatg
gcagcgcaatcaatcggtgagccgggtacccagctaaccatgcgtaccttccacgtgggt
ggtgccgcgagcgccgcagccgtggaaaacagtattcaggttaataaaggcggtactgtt
cgcttccaaaacttgaaatctgtaagccatgccgacggtcatttggtggtagtttctcgc
tctgcagaaattagtattaccgatgaattgggccgtgagcgtgagcgctataaagcaccg
tatggttcgtcaattctagtggctgatggaactgaagttaccccaggtcaaaccattggt
aaatgggatccgcatacccatccaatcattaccgaggtatcaggtaccgcacgctttagc
gaaatcaccgatggcttaaccgccaccatgaaaatcgatgaagcaacaggcatgagctca
tacgaaatcttagcgaccaaagaccgcccaagctcgggtaaagatttacgtcctgcgatt
atccttgatactaaagagggtaaagaagtggtgtatttcttaccacagcaaaccatcatt
cgtgtgcgtgaaggcgatgaggtaacaacaggttcgattttaggtcgtgtaccacaagaa
tcatcaggtaccaaagatattaccggtggtctaccacgtgttgctgacttgtttgaagcg
cgtcgtccaaaagatcatgcgattatggcggaaatgagtggtacagtaagctttggtaaa
gacaccaaaggtaaaaaccgctttatcatcaccaatgatgatggcgaagtgcatgaagag
ttgattccaaaatggcgtcaaatcaacgtgtttgagggtgaacgtgttgagcgtggtgag
gtgattgccgatggtccacaaaacccgcacgatatcttacgcttaaaaggtgaaactgag
cttgccaattacatcgtcaatgaagtacaagacgtttaccgcttacaaggggtaaaaatc
aacgacaagcatattgaagtgattattcgtcagatgctacgtaaagttgaagttaccgat
ggaggtgactcaagctacttcaaaggtgaccaagctgaatacgctgatatcgtcgccatg
aacaaaaaactcgacgaagagaacaagttcccagtcaagtttgaccgtttattgctcggt
atcaccaaagcctcattggcaactgaaagctttatttctgcggcgtcattccaagaaaca
acgcgcgtattgacggcggcagcagttactggcaagattgatgacttacgcggtctaaaa
gaaaacgtggttgtcggtcgcttggtcccatcaggtactggtctagcttaccatgcccag
cgtctagagagcggtaaaaccaccgccacagaagctactgaaaatcagcagctagaagca
ttagacaccttgtttgccgaaaacatggagcctgcgtcaatgtcatttgaagacaaattt
gctgaagagtttaatagccaagatgcaaaataa
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